EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000032509 (Gene tree)
Gene ID: 463180
Gene Symbol: DDX39B
Alias: -
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 11363 bases
Position: chr6:31688264-31699626
Accession: 52006
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000054521	ResIII	PF04851.15	2.2e-07	1	1
ENSPTRP00000084349	ResIII	PF04851.15	2.5e-07	1	1
ENSPTRP00000054521	DEAD	PF00270.29	1.1e-38	1	1
ENSPTRP00000084349	DEAD	PF00270.29	3.3e-37	1	1
ENSPTRP00000091440	DEAD	PF00270.29	7.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000087280	-	1272	-	ENSPTRP00000091440	423 (aa)	-	A0A2I3TQB9
ENSPTRT00000093115	-	1245	-	ENSPTRP00000084349	414 (aa)	-	A0A2I3T549
ENSPTRT00000061973	-	2058	XM_009450850	ENSPTRP00000054521	428 (aa)	XP_009449125	P60024

Gene Model

Click here to download ENSPTRG00000032509's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03013	RNA transport	KEGG
ptr03015	mRNA surveillance pathway	KEGG
ptr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000032509's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000032509	DDX39B	86	38.919	ENSPTRG00000015718	EIF4A2	94	36.242
ENSPTRG00000032509	DDX39B	92	36.802	ENSPTRG00000008694	EIF4A1	95	36.802
ENSPTRG00000032509	DDX39B	86	32.153	ENSPTRG00000048517	-	95	30.435
ENSPTRG00000032509	DDX39B	86	30.319	ENSPTRG00000009523	DDX42	51	30.685
ENSPTRG00000032509	DDX39B	72	30.233	ENSPTRG00000008298	DDX19B	72	30.233
ENSPTRG00000032509	DDX39B	77	30.211	ENSPTRG00000009543	DDX5	59	30.029
ENSPTRG00000032509	DDX39B	83	30.790	ENSPTRG00000022488	DDX3Y	58	30.790
ENSPTRG00000032509	DDX39B	88	31.383	ENSPTRG00000050136	-	80	31.383
ENSPTRG00000032509	DDX39B	71	34.967	ENSPTRG00000051629	-	92	34.967
ENSPTRG00000032509	DDX39B	93	34.663	ENSPTRG00000043870	-	91	34.663
ENSPTRG00000032509	DDX39B	87	31.759	ENSPTRG00000010725	DDX49	71	39.241
ENSPTRG00000032509	DDX39B	87	31.202	ENSPTRG00000033743	DDX47	82	31.202
ENSPTRG00000032509	DDX39B	84	30.352	ENSPTRG00000004450	DDX25	82	30.556
ENSPTRG00000032509	DDX39B	79	30.435	ENSPTRG00000017589	DDX41	54	30.435
ENSPTRG00000032509	DDX39B	100	89.953	ENSPTRG00000010590	DDX39A	100	89.953
ENSPTRG00000032509	DDX39B	75	30.462	ENSPTRG00000008301	-	77	30.462
ENSPTRG00000032509	DDX39B	100	89.953	ENSPTRG00000042673	-	100	89.953
ENSPTRG00000032509	DDX39B	86	37.197	ENSPTRG00000009737	EIF4A3	89	37.197
ENSPTRG00000032509	DDX39B	86	30.623	ENSPTRG00000049911	-	88	30.623
ENSPTRG00000032509	DDX39B	99	34.033	ENSPTRG00000004353	DDX6	79	35.659
ENSPTRG00000032509	DDX39B	82	30.663	ENSPTRG00000049651	DDX3X	58	30.052
ENSPTRG00000032509	DDX39B	86	31.707	ENSPTRG00000050879	-	94	31.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000032509	DDX39B	100	100.000	ENSG00000198563	DDX39B	100	100.000	Homo_sapiens
ENSPTRG00000032509	DDX39B	100	99.766	ENSAMEG00000009508	DDX39B	99	99.766	Ailuropoda_melanoleuca
ENSPTRG00000032509	DDX39B	99	93.677	ENSACIG00000004534	ddx39b	98	93.677	Amphilophus_citrinellus
ENSPTRG00000032509	DDX39B	100	92.824	ENSATEG00000012366	ddx39b	100	92.824	Anabas_testudineus
ENSPTRG00000032509	DDX39B	100	97.203	ENSACAG00000012240	DDX39B	100	97.203	Anolis_carolinensis
ENSPTRG00000032509	DDX39B	100	100.000	ENSANAG00000030372	DDX39B	100	100.000	Aotus_nancymaae
ENSPTRG00000032509	DDX39B	99	90.783	ENSACLG00000018759	ddx39b	99	90.783	Astatotilapia_calliptera
ENSPTRG00000032509	DDX39B	100	92.431	ENSAMXG00000017837	ddx39b	100	92.431	Astyanax_mexicanus
ENSPTRG00000032509	DDX39B	100	99.766	ENSBTAG00000014490	DDX39B	100	99.766	Bos_taurus
ENSPTRG00000032509	DDX39B	100	100.000	ENSCJAG00000003152	DDX39B	100	100.000	Callithrix_jacchus
ENSPTRG00000032509	DDX39B	100	99.533	ENSCAFG00000000509	DDX39B	100	100.000	Canis_familiaris
ENSPTRG00000032509	DDX39B	100	99.533	ENSCAFG00020020530	DDX39B	100	99.533	Canis_lupus_dingo
ENSPTRG00000032509	DDX39B	100	99.766	ENSCHIG00000004579	DDX39B	100	99.766	Capra_hircus
ENSPTRG00000032509	DDX39B	100	85.280	ENSTSYG00000029741	-	100	82.968	Carlito_syrichta
ENSPTRG00000032509	DDX39B	100	100.000	ENSTSYG00000010226	-	100	100.000	Carlito_syrichta
ENSPTRG00000032509	DDX39B	100	99.766	ENSCAPG00000010066	DDX39B	100	99.766	Cavia_aperea
ENSPTRG00000032509	DDX39B	100	99.766	ENSCPOG00000002335	DDX39B	100	99.766	Cavia_porcellus
ENSPTRG00000032509	DDX39B	100	100.000	ENSCCAG00000027897	DDX39B	100	100.000	Cebus_capucinus
ENSPTRG00000032509	DDX39B	99	90.353	ENSCATG00000043709	DDX39B	99	90.353	Cercocebus_atys
ENSPTRG00000032509	DDX39B	100	99.766	ENSCLAG00000014555	DDX39B	100	99.766	Chinchilla_lanigera
ENSPTRG00000032509	DDX39B	99	99.765	ENSCSAG00000008517	DDX39B	100	99.765	Chlorocebus_sabaeus
ENSPTRG00000032509	DDX39B	66	100.000	ENSCPBG00000014671	-	100	100.000	Chrysemys_picta_bellii
ENSPTRG00000032509	DDX39B	100	100.000	ENSCANG00000041217	DDX39B	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000032509	DDX39B	57	99.184	ENSCGRG00001017315	-	95	99.029	Cricetulus_griseus_chok1gshd
ENSPTRG00000032509	DDX39B	86	84.314	ENSCGRG00001021916	-	89	84.358	Cricetulus_griseus_chok1gshd
ENSPTRG00000032509	DDX39B	57	99.184	ENSCGRG00000012479	-	76	99.184	Cricetulus_griseus_crigri
ENSPTRG00000032509	DDX39B	100	92.184	ENSDARG00000036069	ddx39b	100	92.414	Danio_rerio
ENSPTRG00000032509	DDX39B	100	100.000	ENSDNOG00000010215	DDX39B	100	100.000	Dasypus_novemcinctus
ENSPTRG00000032509	DDX39B	87	99.733	ENSDORG00000004985	Ddx39b	100	99.733	Dipodomys_ordii
ENSPTRG00000032509	DDX39B	87	86.898	ENSETEG00000009649	DDX39B	87	86.898	Echinops_telfairi
ENSPTRG00000032509	DDX39B	100	100.000	ENSEASG00005017156	DDX39B	100	100.000	Equus_asinus_asinus
ENSPTRG00000032509	DDX39B	100	100.000	ENSECAG00000007750	DDX39B	100	100.000	Equus_caballus
ENSPTRG00000032509	DDX39B	100	92.343	ENSELUG00000017904	ddx39b	100	92.343	Esox_lucius
ENSPTRG00000032509	DDX39B	100	99.766	ENSFCAG00000004497	DDX39B	100	99.766	Felis_catus
ENSPTRG00000032509	DDX39B	100	99.766	ENSFDAG00000011074	DDX39B	100	99.766	Fukomys_damarensis
ENSPTRG00000032509	DDX39B	76	99.684	ENSGAGG00000001300	-	91	90.000	Gopherus_agassizii
ENSPTRG00000032509	DDX39B	100	100.000	ENSGGOG00000005989	DDX39B	100	100.000	Gorilla_gorilla
ENSPTRG00000032509	DDX39B	100	99.299	ENSHGLG00000019248	DDX39B	100	99.299	Heterocephalus_glaber_female
ENSPTRG00000032509	DDX39B	100	99.299	ENSHGLG00100011850	DDX39B	100	99.299	Heterocephalus_glaber_male
ENSPTRG00000032509	DDX39B	100	91.284	ENSIPUG00000015733	DDX39B	94	91.743	Ictalurus_punctatus
ENSPTRG00000032509	DDX39B	100	99.533	ENSSTOG00000012838	DDX39B	100	99.533	Ictidomys_tridecemlineatus
ENSPTRG00000032509	DDX39B	100	99.299	ENSJJAG00000005660	-	100	99.299	Jaculus_jaculus
ENSPTRG00000032509	DDX39B	99	78.251	ENSLBEG00000012254	ddx39b	99	78.220	Labrus_bergylta
ENSPTRG00000032509	DDX39B	66	79.078	ENSLBEG00000017177	-	85	75.102	Labrus_bergylta
ENSPTRG00000032509	DDX39B	100	89.862	ENSLACG00000002110	DDX39B	100	89.862	Latimeria_chalumnae
ENSPTRG00000032509	DDX39B	100	99.766	ENSLAFG00000014202	DDX39B	100	99.766	Loxodonta_africana
ENSPTRG00000032509	DDX39B	100	100.000	ENSMFAG00000034233	DDX39B	100	100.000	Macaca_fascicularis
ENSPTRG00000032509	DDX39B	100	100.000	ENSMMUG00000008839	DDX39B	100	100.000	Macaca_mulatta
ENSPTRG00000032509	DDX39B	100	100.000	ENSMNEG00000041059	DDX39B	100	100.000	Macaca_nemestrina
ENSPTRG00000032509	DDX39B	100	100.000	ENSMLEG00000043791	DDX39B	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000032509	DDX39B	99	90.783	ENSMZEG00005017654	ddx39b	99	90.783	Maylandia_zebra
ENSPTRG00000032509	DDX39B	100	99.299	ENSMAUG00000008059	Ddx39b	100	99.299	Mesocricetus_auratus
ENSPTRG00000032509	DDX39B	100	100.000	ENSMICG00000017349	DDX39B	100	100.000	Microcebus_murinus
ENSPTRG00000032509	DDX39B	100	99.533	ENSMOCG00000011169	Ddx39b	100	99.533	Microtus_ochrogaster
ENSPTRG00000032509	DDX39B	88	99.734	ENSMODG00000015791	DDX39B	88	99.734	Monodelphis_domestica
ENSPTRG00000032509	DDX39B	100	99.533	ENSMUSG00000019432	Ddx39b	100	100.000	Mus_musculus
ENSPTRG00000032509	DDX39B	100	99.533	MGP_PahariEiJ_G0020513	Ddx39b	100	100.000	Mus_pahari
ENSPTRG00000032509	DDX39B	100	99.533	MGP_SPRETEiJ_G0022424	Ddx39b	100	99.533	Mus_spretus
ENSPTRG00000032509	DDX39B	100	99.766	ENSMPUG00000011407	DDX39B	100	99.766	Mustela_putorius_furo
ENSPTRG00000032509	DDX39B	75	100.000	ENSMLUG00000001681	DDX39B	100	100.000	Myotis_lucifugus
ENSPTRG00000032509	DDX39B	100	100.000	ENSNGAG00000022948	Ddx39b	100	100.000	Nannospalax_galili
ENSPTRG00000032509	DDX39B	100	75.650	ENSNLEG00000006094	DDX39B	81	99.649	Nomascus_leucogenys
ENSPTRG00000032509	DDX39B	86	100.000	ENSMEUG00000008264	DDX39B	86	100.000	Notamacropus_eugenii
ENSPTRG00000032509	DDX39B	100	99.766	ENSOPRG00000011923	DDX39B	100	99.766	Ochotona_princeps
ENSPTRG00000032509	DDX39B	100	99.533	ENSODEG00000018083	DDX39B	100	99.533	Octodon_degus
ENSPTRG00000032509	DDX39B	100	91.898	ENSONIG00000004740	ddx39b	100	91.898	Oreochromis_niloticus
ENSPTRG00000032509	DDX39B	55	99.156	ENSOANG00000008361	DDX39B	95	99.156	Ornithorhynchus_anatinus
ENSPTRG00000032509	DDX39B	100	96.163	ENSOCUG00000024126	DDX39B	100	96.163	Oryctolagus_cuniculus
ENSPTRG00000032509	DDX39B	86	91.421	ENSOGAG00000009067	-	100	98.457	Otolemur_garnettii
ENSPTRG00000032509	DDX39B	100	98.601	ENSOGAG00000028850	-	100	98.601	Otolemur_garnettii
ENSPTRG00000032509	DDX39B	100	99.766	ENSOARG00000008787	DDX39B	98	99.766	Ovis_aries
ENSPTRG00000032509	DDX39B	100	100.000	ENSPPAG00000043072	DDX39B	100	100.000	Pan_paniscus
ENSPTRG00000032509	DDX39B	100	99.766	ENSPPRG00000001913	DDX39B	100	99.766	Panthera_pardus
ENSPTRG00000032509	DDX39B	100	98.832	ENSPTIG00000017669	DDX39B	100	98.832	Panthera_tigris_altaica
ENSPTRG00000032509	DDX39B	100	100.000	ENSPANG00000018609	DDX39B	100	100.000	Papio_anubis
ENSPTRG00000032509	DDX39B	100	90.847	ENSPKIG00000011324	ddx39b	100	91.304	Paramormyrops_kingsleyae
ENSPTRG00000032509	DDX39B	100	99.299	ENSPEMG00000016905	Ddx39b	100	99.299	Peromyscus_maniculatus_bairdii
ENSPTRG00000032509	DDX39B	100	100.000	ENSPCIG00000017572	DDX39B	100	100.000	Phascolarctos_cinereus
ENSPTRG00000032509	DDX39B	100	100.000	ENSPPYG00000016433	DDX39B	100	100.000	Pongo_abelii
ENSPTRG00000032509	DDX39B	69	99.648	ENSPCAG00000003484	DDX39B	100	99.648	Procavia_capensis
ENSPTRG00000032509	DDX39B	100	100.000	ENSPCOG00000018656	DDX39B	100	100.000	Propithecus_coquereli
ENSPTRG00000032509	DDX39B	100	99.533	ENSPVAG00000004653	DDX39B	100	99.533	Pteropus_vampyrus
ENSPTRG00000032509	DDX39B	99	82.904	ENSPNYG00000010382	ddx39b	98	82.904	Pundamilia_nyererei
ENSPTRG00000032509	DDX39B	100	92.202	ENSPNAG00000026926	ddx39b	100	92.202	Pygocentrus_nattereri
ENSPTRG00000032509	DDX39B	100	99.533	ENSRNOG00000000841	Ddx39b	100	99.533	Rattus_norvegicus
ENSPTRG00000032509	DDX39B	100	89.720	ENSRBIG00000031309	DDX39B	100	89.720	Rhinopithecus_bieti
ENSPTRG00000032509	DDX39B	100	100.000	ENSRROG00000039517	DDX39B	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000032509	DDX39B	100	89.720	ENSSBOG00000035513	-	100	89.720	Saimiri_boliviensis_boliviensis
ENSPTRG00000032509	DDX39B	100	100.000	ENSSHAG00000003209	DDX39B	100	100.000	Sarcophilus_harrisii
ENSPTRG00000032509	DDX39B	100	91.076	ENSSFOG00015016107	ddx39b	100	91.762	Scleropages_formosus
ENSPTRG00000032509	DDX39B	100	93.287	ENSSDUG00000011557	ddx39b	100	93.519	Seriola_dumerili
ENSPTRG00000032509	DDX39B	100	93.056	ENSSLDG00000015763	ddx39b	100	93.287	Seriola_lalandi_dorsalis
ENSPTRG00000032509	DDX39B	87	87.701	ENSSARG00000005245	DDX39B	100	87.701	Sorex_araneus
ENSPTRG00000032509	DDX39B	100	97.897	ENSSPUG00000012805	DDX39B	100	97.897	Sphenodon_punctatus
ENSPTRG00000032509	DDX39B	100	100.000	ENSSSCG00000001400	DDX39B	100	100.000	Sus_scrofa
ENSPTRG00000032509	DDX39B	100	76.869	ENSTBEG00000003721	DDX39B	100	76.869	Tupaia_belangeri
ENSPTRG00000032509	DDX39B	100	91.455	ENSTTRG00000014074	DDX39B	100	91.455	Tursiops_truncatus
ENSPTRG00000032509	DDX39B	100	86.977	ENSUAMG00000027335	DDX39B	100	86.977	Ursus_americanus
ENSPTRG00000032509	DDX39B	100	90.888	ENSUMAG00000015124	DDX39B	100	90.888	Ursus_maritimus
ENSPTRG00000032509	DDX39B	61	100.000	ENSVPAG00000009167	-	74	100.000	Vicugna_pacos
ENSPTRG00000032509	DDX39B	100	99.533	ENSVVUG00000019518	DDX39B	99	99.533	Vulpes_vulpes
ENSPTRG00000032509	DDX39B	100	83.953	ENSXETG00000002498	ddx39b	99	83.953	Xenopus_tropicalis