EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000034497 (Gene tree)
Gene ID: 107975445
Gene Symbol: VARS2
Alias: -
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 12287 bases
Position: chr6:31121542-31133828
Accession: 53443
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000082204	tRNA-synt_1g	PF09334.11	9.2e-15	1	1
ENSPTRP00000056402	tRNA-synt_1g	PF09334.11	1.1e-14	1	1
ENSPTRP00000082204	Anticodon_1	PF08264.13	3.8e-31	1	1
ENSPTRP00000056402	Anticodon_1	PF08264.13	6.6e-31	1	1
ENSPTRP00000082204	tRNA-synt_1	PF00133.22	3.8e-182	1	1
ENSPTRP00000056402	tRNA-synt_1	PF00133.22	4.2e-182	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000101372	-	3747	XM_016956716	ENSPTRP00000082204	1063 (aa)	XP_016812205	A0A2I3SYY1
ENSPTRT00000064841	-	3297	XM_016956713	ENSPTRP00000056402	1098 (aa)	XP_016812202	H2RBW3

Gene Model

Click here to download ENSPTRG00000034497's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000034497's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000034497	VARS2	91	51.762	ENSPTRG00000017985	VARS	81	50.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000034497	VARS2	92	51.232	ENSAPOG00000007396	vars2	97	50.284	Acanthochromis_polyacanthus
ENSPTRG00000034497	VARS2	99	86.604	ENSAMEG00000012997	VARS2	99	84.658	Ailuropoda_melanoleuca
ENSPTRG00000034497	VARS2	98	50.613	ENSACIG00000004344	vars2	97	50.613	Amphilophus_citrinellus
ENSPTRG00000034497	VARS2	92	50.789	ENSAOCG00000000476	vars2	97	49.716	Amphiprion_ocellaris
ENSPTRG00000034497	VARS2	92	50.888	ENSAPEG00000008646	vars2	95	49.811	Amphiprion_percula
ENSPTRG00000034497	VARS2	91	53.206	ENSATEG00000012291	vars2	96	52.015	Anabas_testudineus
ENSPTRG00000034497	VARS2	97	58.588	ENSACAG00000022093	VARS2	97	58.588	Anolis_carolinensis
ENSPTRG00000034497	VARS2	100	93.885	ENSANAG00000038018	VARS2	100	93.885	Aotus_nancymaae
ENSPTRG00000034497	VARS2	98	50.140	ENSACLG00000018673	vars2	98	50.140	Astatotilapia_calliptera
ENSPTRG00000034497	VARS2	95	51.996	ENSAMXG00000017773	vars2	98	51.634	Astyanax_mexicanus
ENSPTRG00000034497	VARS2	99	89.573	ENSBTAG00000010698	VARS2	99	89.444	Bos_taurus
ENSPTRG00000034497	VARS2	100	94.167	ENSCJAG00000019826	VARS2	100	94.167	Callithrix_jacchus
ENSPTRG00000034497	VARS2	99	85.364	ENSCAFG00000000454	VARS2	99	85.364	Canis_familiaris
ENSPTRG00000034497	VARS2	87	85.961	ENSCAFG00020019387	VARS2	95	86.006	Canis_lupus_dingo
ENSPTRG00000034497	VARS2	99	89.374	ENSCHIG00000007847	VARS2	99	89.151	Capra_hircus
ENSPTRG00000034497	VARS2	100	89.004	ENSTSYG00000009904	VARS2	100	89.004	Carlito_syrichta
ENSPTRG00000034497	VARS2	88	84.335	ENSCAPG00000017770	VARS2	99	84.335	Cavia_aperea
ENSPTRG00000034497	VARS2	99	83.631	ENSCPOG00000021834	VARS2	99	83.631	Cavia_porcellus
ENSPTRG00000034497	VARS2	100	94.450	ENSCCAG00000037907	VARS2	100	94.450	Cebus_capucinus
ENSPTRG00000034497	VARS2	100	97.366	ENSCATG00000032554	VARS2	100	97.366	Cercocebus_atys
ENSPTRG00000034497	VARS2	99	84.449	ENSCLAG00000002889	VARS2	99	84.449	Chinchilla_lanigera
ENSPTRG00000034497	VARS2	100	96.896	ENSCSAG00000008327	VARS2	100	96.896	Chlorocebus_sabaeus
ENSPTRG00000034497	VARS2	90	62.642	ENSCPBG00000021502	VARS2	96	62.642	Chrysemys_picta_bellii
ENSPTRG00000034497	VARS2	100	97.272	ENSCANG00000014991	VARS2	100	96.664	Colobus_angolensis_palliatus
ENSPTRG00000034497	VARS2	98	83.158	ENSCGRG00001021535	Vars2	99	82.987	Cricetulus_griseus_chok1gshd
ENSPTRG00000034497	VARS2	98	83.158	ENSCGRG00000014112	Vars2	99	82.987	Cricetulus_griseus_crigri
ENSPTRG00000034497	VARS2	85	56.738	ENSCSEG00000015432	vars2	93	56.738	Cynoglossus_semilaevis
ENSPTRG00000034497	VARS2	64	51.768	ENSCVAG00000017765	vars2	98	51.768	Cyprinodon_variegatus
ENSPTRG00000034497	VARS2	96	51.675	ENSDARG00000056717	vars2	97	51.675	Danio_rerio
ENSPTRG00000034497	VARS2	78	86.977	ENSDORG00000008516	Vars2	93	86.977	Dipodomys_ordii
ENSPTRG00000034497	VARS2	100	76.128	ENSETEG00000014844	VARS2	99	76.128	Echinops_telfairi
ENSPTRG00000034497	VARS2	99	89.444	ENSEASG00005019997	VARS2	99	87.934	Equus_asinus_asinus
ENSPTRG00000034497	VARS2	99	90.678	ENSECAG00000018202	VARS2	100	90.678	Equus_caballus
ENSPTRG00000034497	VARS2	68	85.437	ENSEEUG00000012591	-	69	85.437	Erinaceus_europaeus
ENSPTRG00000034497	VARS2	93	51.744	ENSELUG00000017824	vars2	98	50.882	Esox_lucius
ENSPTRG00000034497	VARS2	99	86.874	ENSFCAG00000010531	VARS2	99	86.874	Felis_catus
ENSPTRG00000034497	VARS2	99	84.962	ENSFDAG00000017216	VARS2	99	84.962	Fukomys_damarensis
ENSPTRG00000034497	VARS2	84	51.844	ENSFHEG00000013932	vars2	91	50.647	Fundulus_heteroclitus
ENSPTRG00000034497	VARS2	88	54.737	ENSGMOG00000018960	vars2	98	54.737	Gadus_morhua
ENSPTRG00000034497	VARS2	85	48.517	ENSGAFG00000004737	vars2	92	48.517	Gambusia_affinis
ENSPTRG00000034497	VARS2	92	53.347	ENSGACG00000001464	vars2	99	53.347	Gasterosteus_aculeatus
ENSPTRG00000034497	VARS2	90	62.165	ENSGAGG00000011652	VARS2	98	62.165	Gopherus_agassizii
ENSPTRG00000034497	VARS2	100	99.247	ENSGGOG00000014587	VARS2	100	99.251	Gorilla_gorilla
ENSPTRG00000034497	VARS2	91	51.509	ENSHBUG00000002448	vars2	94	51.509	Haplochromis_burtoni
ENSPTRG00000034497	VARS2	99	83.600	ENSHGLG00000012886	VARS2	98	82.061	Heterocephalus_glaber_female
ENSPTRG00000034497	VARS2	99	83.506	ENSHGLG00100016535	VARS2	99	83.506	Heterocephalus_glaber_male
ENSPTRG00000034497	VARS2	69	48.871	ENSHCOG00000017907	vars2	95	50.904	Hippocampus_comes
ENSPTRG00000034497	VARS2	91	53.877	ENSIPUG00000015573	Vars2	96	52.772	Ictalurus_punctatus
ENSPTRG00000034497	VARS2	100	89.192	ENSSTOG00000009924	VARS2	100	89.192	Ictidomys_tridecemlineatus
ENSPTRG00000034497	VARS2	99	82.941	ENSJJAG00000011144	Vars2	100	82.941	Jaculus_jaculus
ENSPTRG00000034497	VARS2	93	50.921	ENSKMAG00000001393	vars2	96	50.523	Kryptolebias_marmoratus
ENSPTRG00000034497	VARS2	52	62.342	ENSLBEG00000005480	-	81	62.319	Labrus_bergylta
ENSPTRG00000034497	VARS2	94	51.161	ENSLBEG00000011949	vars2	96	50.860	Labrus_bergylta
ENSPTRG00000034497	VARS2	95	52.326	ENSLACG00000001576	-	99	52.422	Latimeria_chalumnae
ENSPTRG00000034497	VARS2	99	87.299	ENSLAFG00000015183	VARS2	99	87.299	Loxodonta_africana
ENSPTRG00000034497	VARS2	100	96.519	ENSMFAG00000042367	VARS2	100	96.519	Macaca_fascicularis
ENSPTRG00000034497	VARS2	100	96.613	ENSMMUG00000018609	VARS2	100	96.613	Macaca_mulatta
ENSPTRG00000034497	VARS2	100	96.707	ENSMNEG00000043163	VARS2	100	96.707	Macaca_nemestrina
ENSPTRG00000034497	VARS2	100	97.460	ENSMLEG00000041728	VARS2	100	96.633	Mandrillus_leucophaeus
ENSPTRG00000034497	VARS2	96	50.144	ENSMAMG00000020339	vars2	97	49.905	Mastacembelus_armatus
ENSPTRG00000034497	VARS2	98	50.047	ENSMZEG00005017669	vars2	98	50.047	Maylandia_zebra
ENSPTRG00000034497	VARS2	99	83.475	ENSMAUG00000018946	Vars2	99	83.475	Mesocricetus_auratus
ENSPTRG00000034497	VARS2	84	90.919	ENSMICG00000005365	VARS2	100	90.919	Microcebus_murinus
ENSPTRG00000034497	VARS2	93	85.455	ENSMOCG00000014607	Vars2	99	85.455	Microtus_ochrogaster
ENSPTRG00000034497	VARS2	91	51.672	ENSMMOG00000012122	vars2	96	50.193	Mola_mola
ENSPTRG00000034497	VARS2	99	75.024	ENSMODG00000015848	VARS2	99	75.024	Monodelphis_domestica
ENSPTRG00000034497	VARS2	93	51.992	ENSMALG00000009217	vars2	98	51.992	Monopterus_albus
ENSPTRG00000034497	VARS2	99	83.932	MGP_CAROLIEiJ_G0021529	Vars2	99	83.932	Mus_caroli
ENSPTRG00000034497	VARS2	99	83.648	ENSMUSG00000038838	Vars2	99	83.648	Mus_musculus
ENSPTRG00000034497	VARS2	99	84.121	MGP_PahariEiJ_G0020523	Vars2	99	84.121	Mus_pahari
ENSPTRG00000034497	VARS2	99	83.743	MGP_SPRETEiJ_G0022436	Vars2	99	83.743	Mus_spretus
ENSPTRG00000034497	VARS2	99	86.792	ENSMPUG00000011643	VARS2	99	86.792	Mustela_putorius_furo
ENSPTRG00000034497	VARS2	99	84.049	ENSMLUG00000002356	VARS2	98	83.241	Myotis_lucifugus
ENSPTRG00000034497	VARS2	98	77.916	ENSNGAG00000020607	Vars2	100	77.538	Nannospalax_galili
ENSPTRG00000034497	VARS2	61	49.036	ENSNBRG00000001624	vars2	57	50.276	Neolamprologus_brichardi
ENSPTRG00000034497	VARS2	100	94.361	ENSNLEG00000005625	VARS2	100	93.455	Nomascus_leucogenys
ENSPTRG00000034497	VARS2	78	72.667	ENSMEUG00000014475	VARS2	90	72.667	Notamacropus_eugenii
ENSPTRG00000034497	VARS2	90	83.628	ENSOPRG00000000682	VARS2	90	83.628	Ochotona_princeps
ENSPTRG00000034497	VARS2	99	83.113	ENSODEG00000017965	VARS2	99	83.113	Octodon_degus
ENSPTRG00000034497	VARS2	93	37.524	ENSONIG00000004734	vars2	98	37.524	Oreochromis_niloticus
ENSPTRG00000034497	VARS2	82	61.521	ENSOANG00000000398	-	99	61.521	Ornithorhynchus_anatinus
ENSPTRG00000034497	VARS2	99	81.215	ENSOCUG00000021496	VARS2	65	80.497	Oryctolagus_cuniculus
ENSPTRG00000034497	VARS2	94	52.102	ENSORLG00000010632	vars2	94	51.527	Oryzias_latipes
ENSPTRG00000034497	VARS2	92	52.174	ENSORLG00020018584	vars2	96	51.292	Oryzias_latipes_hni
ENSPTRG00000034497	VARS2	92	52.075	ENSORLG00015010408	vars2	96	50.951	Oryzias_latipes_hsok
ENSPTRG00000034497	VARS2	91	53.260	ENSOMEG00000008360	vars2	95	51.880	Oryzias_melastigma
ENSPTRG00000034497	VARS2	100	89.962	ENSOGAG00000006087	VARS2	100	88.374	Otolemur_garnettii
ENSPTRG00000034497	VARS2	99	88.152	ENSOARG00000010844	VARS2	98	87.936	Ovis_aries
ENSPTRG00000034497	VARS2	100	100.000	ENSPPAG00000041141	VARS2	100	100.000	Pan_paniscus
ENSPTRG00000034497	VARS2	99	86.673	ENSPPRG00000006751	VARS2	99	85.087	Panthera_pardus
ENSPTRG00000034497	VARS2	99	86.578	ENSPTIG00000017799	VARS2	98	87.915	Panthera_tigris_altaica
ENSPTRG00000034497	VARS2	100	97.084	ENSPANG00000018481	VARS2	100	97.084	Papio_anubis
ENSPTRG00000034497	VARS2	95	54.012	ENSPKIG00000011372	vars2	98	53.202	Paramormyrops_kingsleyae
ENSPTRG00000034497	VARS2	59	65.610	ENSPSIG00000006206	VARS2	92	65.123	Pelodiscus_sinensis
ENSPTRG00000034497	VARS2	98	51.959	ENSPMGG00000000465	vars2	99	51.213	Periophthalmus_magnuspinnatus
ENSPTRG00000034497	VARS2	99	84.360	ENSPEMG00000014691	Vars2	99	84.360	Peromyscus_maniculatus_bairdii
ENSPTRG00000034497	VARS2	99	77.105	ENSPCIG00000015040	VARS2	99	77.105	Phascolarctos_cinereus
ENSPTRG00000034497	VARS2	92	52.689	ENSPFOG00000017616	vars2	95	51.751	Poecilia_formosa
ENSPTRG00000034497	VARS2	92	52.234	ENSPLAG00000019778	vars2	96	51.309	Poecilia_latipinna
ENSPTRG00000034497	VARS2	92	52.334	ENSPMEG00000011123	vars2	95	51.406	Poecilia_mexicana
ENSPTRG00000034497	VARS2	89	48.053	ENSPREG00000014998	vars2	95	46.832	Poecilia_reticulata
ENSPTRG00000034497	VARS2	100	98.401	ENSPPYG00000016424	VARS2	100	98.401	Pongo_abelii
ENSPTRG00000034497	VARS2	84	82.635	ENSPCAG00000006946	VARS2	84	82.635	Procavia_capensis
ENSPTRG00000034497	VARS2	99	89.222	ENSPCOG00000014839	VARS2	99	88.033	Propithecus_coquereli
ENSPTRG00000034497	VARS2	100	87.500	ENSPVAG00000004197	VARS2	99	87.500	Pteropus_vampyrus
ENSPTRG00000034497	VARS2	85	55.583	ENSPNYG00000010314	vars2	97	55.583	Pundamilia_nyererei
ENSPTRG00000034497	VARS2	94	53.095	ENSPNAG00000026793	vars2	95	52.908	Pygocentrus_nattereri
ENSPTRG00000034497	VARS2	99	84.011	ENSRNOG00000000833	Vars2	99	84.011	Rattus_norvegicus
ENSPTRG00000034497	VARS2	100	97.084	ENSRBIG00000032725	VARS2	100	97.084	Rhinopithecus_bieti
ENSPTRG00000034497	VARS2	100	96.990	ENSRROG00000043847	VARS2	100	96.990	Rhinopithecus_roxellana
ENSPTRG00000034497	VARS2	100	91.613	ENSSBOG00000033240	VARS2	100	90.812	Saimiri_boliviensis_boliviensis
ENSPTRG00000034497	VARS2	99	75.591	ENSSHAG00000009307	VARS2	100	75.591	Sarcophilus_harrisii
ENSPTRG00000034497	VARS2	98	51.679	ENSSFOG00015016187	vars2	98	51.679	Scleropages_formosus
ENSPTRG00000034497	VARS2	93	52.517	ENSSMAG00000020842	vars2	97	52.011	Scophthalmus_maximus
ENSPTRG00000034497	VARS2	93	52.067	ENSSDUG00000011598	vars2	97	51.143	Seriola_dumerili
ENSPTRG00000034497	VARS2	91	52.497	ENSSLDG00000015492	vars2	97	50.528	Seriola_lalandi_dorsalis
ENSPTRG00000034497	VARS2	57	88.321	ENSSARG00000003786	-	70	88.321	Sorex_araneus
ENSPTRG00000034497	VARS2	88	59.315	ENSSPUG00000014700	VARS2	94	59.315	Sphenodon_punctatus
ENSPTRG00000034497	VARS2	93	50.350	ENSSPAG00000004654	vars2	95	49.278	Stegastes_partitus
ENSPTRG00000034497	VARS2	99	89.057	ENSSSCG00000001384	VARS2	99	89.596	Sus_scrofa
ENSPTRG00000034497	VARS2	93	52.736	ENSTRUG00000005264	vars2	96	51.965	Takifugu_rubripes
ENSPTRG00000034497	VARS2	100	50.138	ENSTNIG00000005916	vars2	100	50.643	Tetraodon_nigroviridis
ENSPTRG00000034497	VARS2	52	89.552	ENSTBEG00000007976	-	53	89.552	Tupaia_belangeri
ENSPTRG00000034497	VARS2	91	89.686	ENSTTRG00000012243	VARS2	100	76.316	Tursiops_truncatus
ENSPTRG00000034497	VARS2	99	86.522	ENSUAMG00000026124	VARS2	99	88.043	Ursus_americanus
ENSPTRG00000034497	VARS2	99	87.547	ENSUMAG00000019894	VARS2	99	87.547	Ursus_maritimus
ENSPTRG00000034497	VARS2	99	85.741	ENSVVUG00000010754	VARS2	95	84.995	Vulpes_vulpes
ENSPTRG00000034497	VARS2	89	54.508	ENSXETG00000003036	vars2	100	54.508	Xenopus_tropicalis
ENSPTRG00000034497	VARS2	89	53.838	ENSXCOG00000003455	vars2	96	52.505	Xiphophorus_couchianus
ENSPTRG00000034497	VARS2	93	51.320	ENSXMAG00000013523	vars2	96	50.963	Xiphophorus_maculatus