EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000038742 (Gene tree)
Gene ID: 451330
Gene Symbol: RNASEH2C
Alias: -
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 2200 bases
Position: chr11:65781311-65783510
Accession: 12801
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000083878	RNase_H2_suC	PF08615.11	4.6e-28	1	1
ENSPTRP00000059783	RNase_H2_suC	PF08615.11	1.1e-27	1	1
ENSPTRP00000082509	RNase_H2_suC	PF08615.11	2.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000107606	-	744	-	ENSPTRP00000082509	247 (aa)	-	A0A2I3SZU0
ENSPTRT00000077788	-	778	XM_508559	ENSPTRP00000083878	164 (aa)	XP_508559	K7CFB0
ENSPTRT00000074013	-	591	-	ENSPTRP00000059783	196 (aa)	-	H2RE48

Gene Model

Click here to download ENSPTRG00000038742's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000038742's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000038742	RNASEH2C	100	99.595	ENSG00000172922	RNASEH2C	100	99.595	Homo_sapiens
ENSPTRG00000038742	RNASEH2C	100	77.326	ENSAMEG00000017348	RNASEH2C	100	77.326	Ailuropoda_melanoleuca
ENSPTRG00000038742	RNASEH2C	100	91.463	ENSANAG00000032535	RNASEH2C	100	91.463	Aotus_nancymaae
ENSPTRG00000038742	RNASEH2C	100	68.452	ENSBTAG00000005577	RNASEH2C	100	68.452	Bos_taurus
ENSPTRG00000038742	RNASEH2C	100	90.244	ENSCJAG00000001965	RNASEH2C	100	90.244	Callithrix_jacchus
ENSPTRG00000038742	RNASEH2C	100	76.190	ENSCAFG00000013292	RNASEH2C	100	76.190	Canis_familiaris
ENSPTRG00000038742	RNASEH2C	100	76.190	ENSCAFG00020015077	RNASEH2C	100	76.190	Canis_lupus_dingo
ENSPTRG00000038742	RNASEH2C	100	68.485	ENSCHIG00000013681	RNASEH2C	100	69.643	Capra_hircus
ENSPTRG00000038742	RNASEH2C	65	76.852	ENSTSYG00000028658	-	65	76.852	Carlito_syrichta
ENSPTRG00000038742	RNASEH2C	100	66.867	ENSCPOG00000013696	RNASEH2C	100	66.867	Cavia_porcellus
ENSPTRG00000038742	RNASEH2C	100	90.854	ENSCCAG00000025461	RNASEH2C	100	90.854	Cebus_capucinus
ENSPTRG00000038742	RNASEH2C	99	66.463	ENSCLAG00000016534	RNASEH2C	99	66.463	Chinchilla_lanigera
ENSPTRG00000038742	RNASEH2C	100	96.951	ENSCSAG00000007985	RNASEH2C	100	96.951	Chlorocebus_sabaeus
ENSPTRG00000038742	RNASEH2C	100	95.122	ENSCANG00000039373	RNASEH2C	100	95.122	Colobus_angolensis_palliatus
ENSPTRG00000038742	RNASEH2C	100	70.482	ENSCGRG00001015383	Rnaseh2c	100	70.482	Cricetulus_griseus_chok1gshd
ENSPTRG00000038742	RNASEH2C	100	70.482	ENSCGRG00000012179	Rnaseh2c	100	70.482	Cricetulus_griseus_crigri
ENSPTRG00000038742	RNASEH2C	100	75.595	ENSDNOG00000035155	RNASEH2C	99	75.595	Dasypus_novemcinctus
ENSPTRG00000038742	RNASEH2C	100	73.054	ENSDORG00000023624	Rnaseh2c	100	73.054	Dipodomys_ordii
ENSPTRG00000038742	RNASEH2C	53	70.115	ENSETEG00000015293	-	81	71.264	Echinops_telfairi
ENSPTRG00000038742	RNASEH2C	75	69.531	ENSETEG00000020048	-	100	69.531	Echinops_telfairi
ENSPTRG00000038742	RNASEH2C	100	75.904	ENSEASG00005004302	RNASEH2C	100	75.301	Equus_asinus_asinus
ENSPTRG00000038742	RNASEH2C	100	76.506	ENSECAG00000017289	RNASEH2C	100	75.904	Equus_caballus
ENSPTRG00000038742	RNASEH2C	100	78.659	ENSFCAG00000044095	RNASEH2C	100	78.659	Felis_catus
ENSPTRG00000038742	RNASEH2C	100	61.364	ENSFDAG00000011974	RNASEH2C	100	61.364	Fukomys_damarensis
ENSPTRG00000038742	RNASEH2C	100	70.732	ENSHGLG00000013478	RNASEH2C	100	70.732	Heterocephalus_glaber_female
ENSPTRG00000038742	RNASEH2C	100	70.732	ENSHGLG00100019352	RNASEH2C	100	70.732	Heterocephalus_glaber_male
ENSPTRG00000038742	RNASEH2C	100	69.364	ENSSTOG00000019410	RNASEH2C	100	69.364	Ictidomys_tridecemlineatus
ENSPTRG00000038742	RNASEH2C	100	75.000	ENSJJAG00000019320	Rnaseh2c	100	75.000	Jaculus_jaculus
ENSPTRG00000038742	RNASEH2C	100	71.006	ENSLAFG00000015641	RNASEH2C	100	71.006	Loxodonta_africana
ENSPTRG00000038742	RNASEH2C	100	94.512	ENSMFAG00000042754	-	100	94.512	Macaca_fascicularis
ENSPTRG00000038742	RNASEH2C	100	95.122	ENSMFAG00000038096	-	100	95.122	Macaca_fascicularis
ENSPTRG00000038742	RNASEH2C	98	93.168	ENSMMUG00000019837	RNASEH2C	100	78.543	Macaca_mulatta
ENSPTRG00000038742	RNASEH2C	100	95.122	ENSMMUG00000016234	-	100	95.122	Macaca_mulatta
ENSPTRG00000038742	RNASEH2C	100	95.732	ENSMNEG00000040939	RNASEH2C	100	95.732	Macaca_nemestrina
ENSPTRG00000038742	RNASEH2C	100	71.084	ENSMAUG00000016346	Rnaseh2c	100	71.084	Mesocricetus_auratus
ENSPTRG00000038742	RNASEH2C	100	79.518	ENSMICG00000008882	RNASEH2C	100	79.518	Microcebus_murinus
ENSPTRG00000038742	RNASEH2C	100	68.235	ENSMOCG00000013231	Rnaseh2c	100	68.235	Microtus_ochrogaster
ENSPTRG00000038742	RNASEH2C	90	51.974	ENSMODG00000009547	-	90	51.974	Monodelphis_domestica
ENSPTRG00000038742	RNASEH2C	100	65.663	MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	67.442	Mus_caroli
ENSPTRG00000038742	RNASEH2C	100	66.265	ENSMUSG00000024925	Rnaseh2c	100	66.265	Mus_musculus
ENSPTRG00000038742	RNASEH2C	100	67.470	MGP_PahariEiJ_G0014057	Rnaseh2c	100	67.470	Mus_pahari
ENSPTRG00000038742	RNASEH2C	100	74.419	ENSMPUG00000011629	RNASEH2C	100	75.581	Mustela_putorius_furo
ENSPTRG00000038742	RNASEH2C	100	73.214	ENSMLUG00000008777	RNASEH2C	100	73.214	Myotis_lucifugus
ENSPTRG00000038742	RNASEH2C	100	59.756	ENSNGAG00000020391	Rnaseh2c	100	59.756	Nannospalax_galili
ENSPTRG00000038742	RNASEH2C	100	96.951	ENSNLEG00000005833	-	100	96.951	Nomascus_leucogenys
ENSPTRG00000038742	RNASEH2C	98	46.250	ENSMEUG00000006205	-	99	46.250	Notamacropus_eugenii
ENSPTRG00000038742	RNASEH2C	100	66.867	ENSODEG00000017806	RNASEH2C	100	66.867	Octodon_degus
ENSPTRG00000038742	RNASEH2C	100	79.651	ENSOGAG00000014128	RNASEH2C	100	79.651	Otolemur_garnettii
ENSPTRG00000038742	RNASEH2C	100	67.879	ENSOARG00000017675	RNASEH2C	100	69.048	Ovis_aries
ENSPTRG00000038742	RNASEH2C	100	99.595	ENSPPAG00000042592	-	100	99.595	Pan_paniscus
ENSPTRG00000038742	RNASEH2C	100	79.878	ENSPPRG00000000774	RNASEH2C	100	79.878	Panthera_pardus
ENSPTRG00000038742	RNASEH2C	100	78.659	ENSPTIG00000011677	RNASEH2C	100	78.659	Panthera_tigris_altaica
ENSPTRG00000038742	RNASEH2C	100	93.522	ENSPANG00000015965	RNASEH2C	100	93.522	Papio_anubis
ENSPTRG00000038742	RNASEH2C	100	69.643	ENSPEMG00000018577	Rnaseh2c	100	69.643	Peromyscus_maniculatus_bairdii
ENSPTRG00000038742	RNASEH2C	100	96.341	ENSPPYG00000003051	RNASEH2C	100	96.341	Pongo_abelii
ENSPTRG00000038742	RNASEH2C	100	70.349	ENSPCAG00000007887	RNASEH2C	100	70.349	Procavia_capensis
ENSPTRG00000038742	RNASEH2C	100	78.313	ENSPCOG00000021092	RNASEH2C	100	78.313	Propithecus_coquereli
ENSPTRG00000038742	RNASEH2C	100	75.152	ENSPVAG00000016950	RNASEH2C	100	75.152	Pteropus_vampyrus
ENSPTRG00000038742	RNASEH2C	100	66.265	ENSRNOG00000020700	Rnaseh2c	100	66.265	Rattus_norvegicus
ENSPTRG00000038742	RNASEH2C	100	93.117	ENSRBIG00000040124	RNASEH2C	100	93.117	Rhinopithecus_bieti
ENSPTRG00000038742	RNASEH2C	100	93.117	ENSRROG00000044910	RNASEH2C	99	96.154	Rhinopithecus_roxellana
ENSPTRG00000038742	RNASEH2C	100	90.854	ENSSBOG00000034781	RNASEH2C	100	90.854	Saimiri_boliviensis_boliviensis
ENSPTRG00000038742	RNASEH2C	100	75.000	ENSSSCG00000012979	RNASEH2C	100	75.000	Sus_scrofa
ENSPTRG00000038742	RNASEH2C	100	53.659	ENSTTRG00000016928	RNASEH2C	100	53.659	Tursiops_truncatus
ENSPTRG00000038742	RNASEH2C	100	76.163	ENSUAMG00000020793	RNASEH2C	100	76.163	Ursus_americanus
ENSPTRG00000038742	RNASEH2C	100	74.419	ENSUMAG00000010791	RNASEH2C	100	74.419	Ursus_maritimus
ENSPTRG00000038742	RNASEH2C	95	71.519	ENSVPAG00000006579	RNASEH2C	100	71.519	Vicugna_pacos
ENSPTRG00000038742	RNASEH2C	96	73.913	ENSVVUG00000027076	RNASEH2C	78	74.847	Vulpes_vulpes