EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTRG00000039358 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Pan_troglodytes
Status
putative
Strand
Plus strand
Length
20674 bases
Position
chr12:23352313-23372986
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTRP00000081312RRM_1PF00076.228.9e-3012
ENSPTRP00000081312RRM_1PF00076.228.9e-3022
ENSPTRP00000078566RRM_1PF00076.229.6e-3012
ENSPTRP00000078566RRM_1PF00076.229.6e-3022
ENSPTRP00000061214RRM_1PF00076.221.9e-1912
ENSPTRP00000061214RRM_1PF00076.221.9e-1922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTRT00000091392-1161-ENSPTRP00000081312386 (aa)-A0A2I3SWF8
ENSPTRT00000075242-1125-ENSPTRP00000061214374 (aa)-H2RI57
ENSPTRT00000097677-1188-ENSPTRP00000078566395 (aa)-A0A2I3SPX3
Gene Model
Click here to download ENSPTRG00000039358's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000039358's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTRG00000039358-9172.358ENSPTRG00000014709RBMS39571.429
ENSPTRG00000039358-9996.859ENSPTRG00000052304RBMS110096.859
ENSPTRG00000039358-5830.435ENSPTRG00000010413ELAVL19130.935
ENSPTRG00000039358-5136.279ENSPTRG00000020830ELAVL25435.149
ENSPTRG00000039358-5238.158ENSPTRG00000002284CELF25438.158
ENSPTRG00000039358-9170.718ENSPTRG00000005104RBMS28870.718
ENSPTRG00000039358-6131.274ENSPTRG00000000723ELAVL46233.036
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTRG00000039358-10096.373ENSG00000153250RBMS110099.213Homo_sapiens
ENSPTRG00000039358-9175.354ENSAPOG00000024437-9470.523Acanthochromis_polyacanthus
ENSPTRG00000039358-9860.588ENSAPOG00000013761rbms1a8965.130Acanthochromis_polyacanthus
ENSPTRG00000039358-9993.782ENSAMEG00000012661RBMS19993.782Ailuropoda_melanoleuca
ENSPTRG00000039358-9853.824ENSACIG00000000113rbms1a8163.880Amphilophus_citrinellus
ENSPTRG00000039358-9775.266ENSACIG00000021498RBMS19773.711Amphilophus_citrinellus
ENSPTRG00000039358-9876.053ENSAOCG00000014482-9576.053Amphiprion_ocellaris
ENSPTRG00000039358-9860.882ENSAOCG00000010066rbms1a8965.418Amphiprion_ocellaris
ENSPTRG00000039358-9875.789ENSAPEG00000018371-9575.789Amphiprion_percula
ENSPTRG00000039358-9860.882ENSAPEG00000023563rbms1a8965.418Amphiprion_percula
ENSPTRG00000039358-9773.936ENSATEG00000018573RBMS18975.000Anabas_testudineus
ENSPTRG00000039358-9860.294ENSATEG00000015450rbms1a8964.553Anabas_testudineus
ENSPTRG00000039358-9988.571ENSAPLG00000007282RBMS19788.601Anas_platyrhynchos
ENSPTRG00000039358-9990.104ENSACAG00000011984RBMS17988.281Anolis_carolinensis
ENSPTRG00000039358-9995.925ENSANAG00000024424RBMS110095.963Aotus_nancymaae
ENSPTRG00000039358-9860.294ENSACLG00000021512rbms1a9064.265Astatotilapia_calliptera
ENSPTRG00000039358-9973.298ENSACLG00000013048RBMS19673.298Astatotilapia_calliptera
ENSPTRG00000039358-9776.738ENSAMXG00000009969RBMS19477.273Astyanax_mexicanus
ENSPTRG00000039358-9968.116ENSAMXG00000002146rbms1a8873.295Astyanax_mexicanus
ENSPTRG00000039358-9995.812ENSBTAG00000005180RBMS19595.812Bos_taurus
ENSPTRG00000039358-9689.431ENSCJAG00000022465-10087.887Callithrix_jacchus
ENSPTRG00000039358-9992.147ENSCJAG00000012871-9992.553Callithrix_jacchus
ENSPTRG00000039358-10095.596ENSCJAG00000014861-9895.078Callithrix_jacchus
ENSPTRG00000039358-9996.073ENSCAFG00000009922RBMS19596.073Canis_familiaris
ENSPTRG00000039358-10094.301ENSCAFG00020006120RBMS19991.315Canis_lupus_dingo
ENSPTRG00000039358-10094.041ENSCHIG00000023380RBMS19594.301Capra_hircus
ENSPTRG00000039358-10095.596ENSTSYG00000005584RBMS110095.710Carlito_syrichta
ENSPTRG00000039358-10095.078ENSCPOG00000012310RBMS110091.436Cavia_porcellus
ENSPTRG00000039358-10095.855ENSCCAG00000033841RBMS110095.855Cebus_capucinus
ENSPTRG00000039358-10095.855ENSCATG00000043032RBMS110095.855Cercocebus_atys
ENSPTRG00000039358-9995.812ENSCLAG00000003031RBMS19894.133Chinchilla_lanigera
ENSPTRG00000039358-10095.596ENSCSAG00000015687RBMS19595.855Chlorocebus_sabaeus
ENSPTRG00000039358-5296.512ENSCHOG00000001579RBMS16796.512Choloepus_hoffmanni
ENSPTRG00000039358-9990.838ENSCPBG00000026455RBMS19689.974Chrysemys_picta_bellii
ENSPTRG00000039358-10095.855ENSCANG00000042152RBMS110095.855Colobus_angolensis_palliatus
ENSPTRG00000039358-10093.005ENSCGRG00001022833Rbms19593.264Cricetulus_griseus_chok1gshd
ENSPTRG00000039358-10093.005ENSCGRG00000008824Rbms110090.176Cricetulus_griseus_crigri
ENSPTRG00000039358-9461.983ENSCSEG00000000889rbms1a9062.536Cynoglossus_semilaevis
ENSPTRG00000039358-9771.733ENSCSEG00000010652RBMS19768.638Cynoglossus_semilaevis
ENSPTRG00000039358-9772.654ENSCVAG00000002027RBMS19673.864Cyprinodon_variegatus
ENSPTRG00000039358-9463.636ENSCVAG00000014698rbms1a8963.977Cyprinodon_variegatus
ENSPTRG00000039358-9966.957ENSDARG00000074023rbms1a8772.443Danio_rerio
ENSPTRG00000039358-9986.427ENSDNOG00000040691RBMS19591.304Dasypus_novemcinctus
ENSPTRG00000039358-9996.073ENSDORG00000007103Rbms19696.084Dipodomys_ordii
ENSPTRG00000039358-9984.514ENSETEG00000012135RBMS110084.514Echinops_telfairi
ENSPTRG00000039358-9995.812ENSEASG00005023132RBMS19595.812Equus_asinus_asinus
ENSPTRG00000039358-10094.819ENSECAG00000019894RBMS19595.078Equus_caballus
ENSPTRG00000039358-7892.771ENSEEUG00000005628RBMS17493.976Erinaceus_europaeus
ENSPTRG00000039358-9565.583ENSELUG00000018923rbms1a9467.143Esox_lucius
ENSPTRG00000039358-9869.211ENSELUG00000019328RBMS19767.766Esox_lucius
ENSPTRG00000039358-10094.560ENSFCAG00000012524RBMS19594.819Felis_catus
ENSPTRG00000039358-9984.058ENSFALG00000004440RBMS19488.920Ficedula_albicollis
ENSPTRG00000039358-9996.325ENSFDAG00000015692RBMS110091.688Fukomys_damarensis
ENSPTRG00000039358-9464.187ENSFHEG00000005662rbms1a7979.618Fundulus_heteroclitus
ENSPTRG00000039358-9771.543ENSFHEG00000000720RBMS18973.011Fundulus_heteroclitus
ENSPTRG00000039358-9456.962ENSGMOG00000000525rbms1a9960.615Gadus_morhua
ENSPTRG00000039358-9989.529ENSGALG00000011132RBMS19589.529Gallus_gallus
ENSPTRG00000039358-9771.835ENSGAFG00000007708RBMS18873.864Gambusia_affinis
ENSPTRG00000039358-9860.000ENSGAFG00000011633rbms1a9564.553Gambusia_affinis
ENSPTRG00000039358-9969.855ENSGACG00000005671RBMS18975.000Gasterosteus_aculeatus
ENSPTRG00000039358-9459.631ENSGACG00000015174rbms1a9166.258Gasterosteus_aculeatus
ENSPTRG00000039358-9990.576ENSGAGG00000007866RBMS19689.717Gopherus_agassizii
ENSPTRG00000039358-9997.120ENSGGOG00000043756-9597.120Gorilla_gorilla
ENSPTRG00000039358-9996.615ENSGGOG00000001264RBMS110095.979Gorilla_gorilla
ENSPTRG00000039358-9275.630ENSHBUG00000004516RBMS19475.630Haplochromis_burtoni
ENSPTRG00000039358-9860.294ENSHBUG00000004802rbms1a9064.265Haplochromis_burtoni
ENSPTRG00000039358-9995.538ENSHGLG00000010387RBMS19795.065Heterocephalus_glaber_female
ENSPTRG00000039358-9995.538ENSHGLG00100014105RBMS19695.065Heterocephalus_glaber_male
ENSPTRG00000039358-9772.340ENSHCOG00000016668RBMS19870.588Hippocampus_comes
ENSPTRG00000039358-9463.085ENSHCOG00000020097rbms1a8963.689Hippocampus_comes
ENSPTRG00000039358-9968.116ENSIPUG00000010131RBMS18873.295Ictalurus_punctatus
ENSPTRG00000039358-9777.926ENSIPUG00000014677RBMS19477.926Ictalurus_punctatus
ENSPTRG00000039358-9996.063ENSSTOG00000012501RBMS110091.436Ictidomys_tridecemlineatus
ENSPTRG00000039358-10093.782ENSJJAG00000016543Rbms19594.041Jaculus_jaculus
ENSPTRG00000039358-9776.330ENSKMAG00000013911RBMS19476.330Kryptolebias_marmoratus
ENSPTRG00000039358-9858.824ENSKMAG00000011839-8963.401Kryptolebias_marmoratus
ENSPTRG00000039358-9775.532ENSLBEG00000005787RBMS19475.532Labrus_bergylta
ENSPTRG00000039358-9860.588ENSLBEG00000025962rbms1a8965.130Labrus_bergylta
ENSPTRG00000039358-9979.587ENSLACG00000004324RBMS19578.811Latimeria_chalumnae
ENSPTRG00000039358-9982.768ENSLOCG00000008622rbms1a9682.768Lepisosteus_oculatus
ENSPTRG00000039358-9995.026ENSLAFG00000017217RBMS110095.026Loxodonta_africana
ENSPTRG00000039358-10096.114ENSMFAG00000000274RBMS110096.114Macaca_fascicularis
ENSPTRG00000039358-10095.596ENSMMUG00000016825RBMS19996.345Macaca_mulatta
ENSPTRG00000039358-10096.114ENSMNEG00000039425RBMS110096.114Macaca_nemestrina
ENSPTRG00000039358-10095.596ENSMLEG00000031517RBMS110095.596Mandrillus_leucophaeus
ENSPTRG00000039358-9860.811ENSMAMG00000005018rbms1a8962.824Mastacembelus_armatus
ENSPTRG00000039358-9968.986ENSMAMG00000003159-9274.074Mastacembelus_armatus
ENSPTRG00000039358-9270.938ENSMZEG00005007313RBMS19175.535Maylandia_zebra
ENSPTRG00000039358-9860.294ENSMZEG00005005661rbms1a9064.265Maylandia_zebra
ENSPTRG00000039358-9989.342ENSMGAG00000011054RBMS110088.754Meleagris_gallopavo
ENSPTRG00000039358-10092.487ENSMAUG00000008550Rbms19592.746Mesocricetus_auratus
ENSPTRG00000039358-10095.078ENSMICG00000008325RBMS110096.073Microcebus_murinus
ENSPTRG00000039358-10092.228ENSMOCG00000022617Rbms19592.487Microtus_ochrogaster
ENSPTRG00000039358-8562.799ENSMMOG00000018249rbms1a8168.000Mola_mola
ENSPTRG00000039358-9775.200ENSMMOG00000003707RBMS19475.200Mola_mola
ENSPTRG00000039358-9989.870ENSMODG00000005250RBMS19589.896Monodelphis_domestica
ENSPTRG00000039358-9471.254ENSMALG00000015715-8974.499Monopterus_albus
ENSPTRG00000039358-9859.706ENSMALG00000014235rbms1a8964.265Monopterus_albus
ENSPTRG00000039358-10091.969MGP_CAROLIEiJ_G0023586Rbms19592.228Mus_caroli
ENSPTRG00000039358-10091.969ENSMUSG00000026970Rbms19592.228Mus_musculus
ENSPTRG00000039358-10091.710MGP_PahariEiJ_G0025037Rbms19592.670Mus_pahari
ENSPTRG00000039358-10092.228MGP_SPRETEiJ_G0024508Rbms19592.487Mus_spretus
ENSPTRG00000039358-10090.050ENSMPUG00000000539RBMS19590.299Mustela_putorius_furo
ENSPTRG00000039358-9989.578ENSMLUG00000008762RBMS19689.578Myotis_lucifugus
ENSPTRG00000039358-10093.523ENSNGAG00000013636Rbms19593.782Nannospalax_galili
ENSPTRG00000039358-9966.377ENSNBRG00000015151RBMS19470.739Neolamprologus_brichardi
ENSPTRG00000039358-8661.695ENSNBRG00000020217rbms1a8566.225Neolamprologus_brichardi
ENSPTRG00000039358-10095.855ENSNLEG00000001667RBMS110095.979Nomascus_leucogenys
ENSPTRG00000039358-9978.056ENSMEUG00000000746RBMS110078.571Notamacropus_eugenii
ENSPTRG00000039358-10088.860ENSOPRG00000012431RBMS19589.119Ochotona_princeps
ENSPTRG00000039358-10094.301ENSODEG00000013934RBMS19594.560Octodon_degus
ENSPTRG00000039358-9973.822ENSONIG00000008934RBMS19673.822Oreochromis_niloticus
ENSPTRG00000039358-9860.000ENSONIG00000003329rbms1a8863.977Oreochromis_niloticus
ENSPTRG00000039358-9991.076ENSOANG00000006166RBMS19691.076Ornithorhynchus_anatinus
ENSPTRG00000039358-5754.583ENSOANG00000004477-9857.143Ornithorhynchus_anatinus
ENSPTRG00000039358-9994.764ENSOCUG00000017365RBMS19094.531Oryctolagus_cuniculus
ENSPTRG00000039358-9461.983ENSORLG00000003917rbms1a9062.536Oryzias_latipes
ENSPTRG00000039358-9271.788ENSORLG00000016818RBMS18972.521Oryzias_latipes
ENSPTRG00000039358-9461.708ENSORLG00020018663rbms1a9062.248Oryzias_latipes_hni
ENSPTRG00000039358-9271.508ENSORLG00020022335RBMS18972.238Oryzias_latipes_hni
ENSPTRG00000039358-9461.983ENSORLG00015016556rbms1a9062.536Oryzias_latipes_hsok
ENSPTRG00000039358-9272.067ENSORLG00015018208RBMS18972.805Oryzias_latipes_hsok
ENSPTRG00000039358-9472.299ENSOMEG00000002394RBMS19470.635Oryzias_melastigma
ENSPTRG00000039358-9989.914ENSOGAG00000002900RBMS19495.198Otolemur_garnettii
ENSPTRG00000039358-10094.041ENSOARG00000006870RBMS19594.301Ovis_aries
ENSPTRG00000039358-9798.936ENSPPAG00000036520-9998.936Pan_paniscus
ENSPTRG00000039358-9996.859ENSPPAG00000040083RBMS110096.859Pan_paniscus
ENSPTRG00000039358-10094.560ENSPPRG00000005040RBMS19594.819Panthera_pardus
ENSPTRG00000039358-9995.538ENSPTIG00000021240RBMS19495.538Panthera_tigris_altaica
ENSPTRG00000039358-9996.597ENSPANG00000001383RBMS19996.345Papio_anubis
ENSPTRG00000039358-10075.835ENSPKIG00000001498rbms1a8877.337Paramormyrops_kingsleyae
ENSPTRG00000039358-9176.771ENSPKIG00000012818rbms1a8876.989Paramormyrops_kingsleyae
ENSPTRG00000039358-9989.610ENSPSIG00000010240RBMS19689.460Pelodiscus_sinensis
ENSPTRG00000039358-9854.706ENSPMGG00000004341rbms1a9059.654Periophthalmus_magnuspinnatus
ENSPTRG00000039358-9368.580ENSPMGG00000006310RBMS19566.193Periophthalmus_magnuspinnatus
ENSPTRG00000039358-9995.013ENSPEMG00000009449Rbms19795.013Peromyscus_maniculatus_bairdii
ENSPTRG00000039358-9990.576ENSPCIG00000018405RBMS19590.576Phascolarctos_cinereus
ENSPTRG00000039358-9860.000ENSPFOG00000016116rbms1a8964.553Poecilia_formosa
ENSPTRG00000039358-9774.202ENSPFOG00000017483RBMS19474.202Poecilia_formosa
ENSPTRG00000039358-9860.000ENSPLAG00000013864rbms1a8964.553Poecilia_latipinna
ENSPTRG00000039358-9173.580ENSPLAG00000000920RBMS18873.580Poecilia_latipinna
ENSPTRG00000039358-9463.912ENSPMEG00000016185rbms1a8964.553Poecilia_mexicana
ENSPTRG00000039358-9774.202ENSPMEG00000015838RBMS19474.202Poecilia_mexicana
ENSPTRG00000039358-9860.000ENSPREG00000020161rbms1a8964.553Poecilia_reticulata
ENSPTRG00000039358-9773.936ENSPREG00000008146RBMS19473.936Poecilia_reticulata
ENSPTRG00000039358-10091.791ENSPPYG00000012879-9592.040Pongo_abelii
ENSPTRG00000039358-10088.342ENSPCAG00000009673RBMS19588.601Procavia_capensis
ENSPTRG00000039358-10095.337ENSPCOG00000027294RBMS110095.442Propithecus_coquereli
ENSPTRG00000039358-10082.124ENSPVAG00000010429RBMS19582.383Pteropus_vampyrus
ENSPTRG00000039358-9973.822ENSPNYG00000002643RBMS19673.822Pundamilia_nyererei
ENSPTRG00000039358-9777.454ENSPNAG00000023479RBMS18878.409Pygocentrus_nattereri
ENSPTRG00000039358-9967.826ENSPNAG00000010225rbms1a8873.011Pygocentrus_nattereri
ENSPTRG00000039358-10092.228ENSRNOG00000008482Rbms19988.806Rattus_norvegicus
ENSPTRG00000039358-10095.349ENSRBIG00000044262RBMS110095.349Rhinopithecus_bieti
ENSPTRG00000039358-10095.855ENSRROG00000043108RBMS110095.855Rhinopithecus_roxellana
ENSPTRG00000039358-9796.515ENSSBOG00000034705RBMS110096.515Saimiri_boliviensis_boliviensis
ENSPTRG00000039358-9990.130ENSSHAG00000012271RBMS110085.217Sarcophilus_harrisii
ENSPTRG00000039358-9972.464ENSSFOG00015014493rbms1a9577.557Scleropages_formosus
ENSPTRG00000039358-9978.646ENSSFOG00015022929rbms19976.250Scleropages_formosus
ENSPTRG00000039358-9474.656ENSSMAG00000012152RBMS19774.656Scophthalmus_maximus
ENSPTRG00000039358-9860.000ENSSMAG00000012722rbms1a9564.553Scophthalmus_maximus
ENSPTRG00000039358-9775.798ENSSDUG00000018803RBMS19475.798Seriola_dumerili
ENSPTRG00000039358-9860.588ENSSDUG00000020602rbms1a9565.130Seriola_dumerili
ENSPTRG00000039358-9860.588ENSSLDG00000009495rbms1a8965.130Seriola_lalandi_dorsalis
ENSPTRG00000039358-9775.532ENSSLDG00000016556RBMS19475.532Seriola_lalandi_dorsalis
ENSPTRG00000039358-10066.580ENSSARG00000011085RBMS19566.839Sorex_araneus
ENSPTRG00000039358-9984.928ENSSPUG00000017163RBMS19490.057Sphenodon_punctatus
ENSPTRG00000039358-9860.294ENSSPAG00000005371rbms1a8964.841Stegastes_partitus
ENSPTRG00000039358-9776.596ENSSPAG00000000059RBMS19476.596Stegastes_partitus
ENSPTRG00000039358-9995.026ENSSSCG00000015888RBMS19595.026Sus_scrofa
ENSPTRG00000039358-9988.831ENSTGUG00000006606RBMS19588.860Taeniopygia_guttata
ENSPTRG00000039358-9858.235ENSTRUG00000017155rbms1a8962.536Takifugu_rubripes
ENSPTRG00000039358-9968.696ENSTRUG00000005466-9770.180Takifugu_rubripes
ENSPTRG00000039358-9261.299ENSTNIG00000009477rbms1a9961.656Tetraodon_nigroviridis
ENSPTRG00000039358-9872.149ENSTNIG00000016496RBMS19774.148Tetraodon_nigroviridis
ENSPTRG00000039358-9985.039ENSTBEG00000016156RBMS110085.039Tupaia_belangeri
ENSPTRG00000039358-9995.538ENSTTRG00000011058RBMS110095.538Tursiops_truncatus
ENSPTRG00000039358-9994.488ENSUAMG00000022331RBMS19991.294Ursus_americanus
ENSPTRG00000039358-10094.301ENSUMAG00000008605RBMS19994.301Ursus_maritimus
ENSPTRG00000039358-9494.737ENSVPAG00000002716RBMS19992.021Vicugna_pacos
ENSPTRG00000039358-10090.547ENSVVUG00000018682RBMS19494.886Vulpes_vulpes
ENSPTRG00000039358-9980.940ENSXETG00000016204rbms110080.157Xenopus_tropicalis
ENSPTRG00000039358-9856.471ENSXCOG00000001659rbms1a8764.984Xiphophorus_couchianus
ENSPTRG00000039358-9969.275ENSXCOG00000000211RBMS19573.580Xiphophorus_couchianus
ENSPTRG00000039358-9860.000ENSXMAG00000001802rbms1a8964.553Xiphophorus_maculatus
ENSPTRG00000039358-9773.670ENSXMAG00000011405RBMS19473.670Xiphophorus_maculatus

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