EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTRG00000041187 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Pan_troglodytes
Status
putative
Strand
Plus strand
Length
1853 bases
Position
chr17:40932419-40934271
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTRP00000087118Smg4_UPF3PF03467.155.1e-2612
ENSPTRP00000087118Smg4_UPF3PF03467.155.1e-2622
ENSPTRP00000080573Smg4_UPF3PF03467.156.3e-2612
ENSPTRP00000080573Smg4_UPF3PF03467.156.3e-2622
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTRT00000074909-1164-ENSPTRP00000087118387 (aa)-A0A2I3TCZ3
ENSPTRT00000089512-1227-ENSPTRP00000080573408 (aa)-A0A2I3SUB0
Gene Model
Click here to download ENSPTRG00000041187's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000041187's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTRG00000041187-5047.107ENSPTRG00000022228UPF3B8338.442
ENSPTRG00000041187-10097.059ENSPTRG00000041835-9997.059
ENSPTRG00000041187-9191.733ENSPTRG00000006073UPF3A9484.652
ENSPTRG00000041187-9686.735ENSPTRG00000051640-9786.735
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTRG00000041187-5047.107ENSG00000125351UPF3B7254.140Homo_sapiens
ENSPTRG00000041187-9191.733ENSG00000169062UPF3A9485.885Homo_sapiens
ENSPTRG00000041187-8545.455ENSAPOG00000013484upf3a8148.831Acanthochromis_polyacanthus
ENSPTRG00000041187-8639.364ENSAPOG00000012775upf3b8738.765Acanthochromis_polyacanthus
ENSPTRG00000041187-9038.810ENSAMEG00000000163UPF3B8738.333Ailuropoda_melanoleuca
ENSPTRG00000041187-9164.115ENSAMEG00000004259UPF3A9264.354Ailuropoda_melanoleuca
ENSPTRG00000041187-8542.611ENSACIG00000020468upf3a5474.074Amphilophus_citrinellus
ENSPTRG00000041187-8649.219ENSATEG00000005843upf3a8049.870Anabas_testudineus
ENSPTRG00000041187-8639.066ENSATEG00000018742upf3b8638.213Anabas_testudineus
ENSPTRG00000041187-8856.962ENSACAG00000001540UPF3A9357.326Anolis_carolinensis
ENSPTRG00000041187-9237.500ENSACAG00000003625UPF3B8438.653Anolis_carolinensis
ENSPTRG00000041187-8639.744ENSANAG00000021894-7353.797Aotus_nancymaae
ENSPTRG00000041187-9183.467ENSANAG00000021713UPF3A9079.500Aotus_nancymaae
ENSPTRG00000041187-8639.332ENSANAG00000025598-6769.355Aotus_nancymaae
ENSPTRG00000041187-8543.176ENSACLG00000026274upf3a8146.402Astatotilapia_calliptera
ENSPTRG00000041187-9043.780ENSAMXG00000002608upf3a8947.188Astyanax_mexicanus
ENSPTRG00000041187-9185.600ENSCJAG00000019102UPF3A9478.469Callithrix_jacchus
ENSPTRG00000041187-8640.000ENSCJAG00000004975UPF3B7353.797Callithrix_jacchus
ENSPTRG00000041187-9656.808ENSCAFG00000006504UPF3A8662.060Canis_familiaris
ENSPTRG00000041187-8938.568ENSCAFG00000018426UPF3B8539.698Canis_familiaris
ENSPTRG00000041187-9657.277ENSCAFG00020014268UPF3A8362.312Canis_lupus_dingo
ENSPTRG00000041187-9039.698ENSCAFG00020004074UPF3B7674.242Canis_lupus_dingo
ENSPTRG00000041187-8638.200ENSCHIG00000018011-5154.140Capra_hircus
ENSPTRG00000041187-9160.391ENSCHIG00000008682UPF3A8558.295Capra_hircus
ENSPTRG00000041187-8835.185ENSCHIG00000011454-8633.333Capra_hircus
ENSPTRG00000041187-8162.791ENSTSYG00000001918UPF3A10062.791Carlito_syrichta
ENSPTRG00000041187-9038.995ENSTSYG00000014690UPF3B8737.799Carlito_syrichta
ENSPTRG00000041187-7757.759ENSCPOG00000006824UPF3A7957.759Cavia_porcellus
ENSPTRG00000041187-8432.987ENSCCAG00000029813-8233.152Cebus_capucinus
ENSPTRG00000041187-9186.133ENSCCAG00000018406UPF3A9479.187Cebus_capucinus
ENSPTRG00000041187-9288.674ENSCATG00000029733UPF3A9481.295Cercocebus_atys
ENSPTRG00000041187-8639.698ENSCATG00000017506UPF3B7353.797Cercocebus_atys
ENSPTRG00000041187-5743.885ENSCLAG00000003260UPF3B8739.286Chinchilla_lanigera
ENSPTRG00000041187-9278.894ENSCSAG00000017388UPF3A9473.289Chlorocebus_sabaeus
ENSPTRG00000041187-9137.019ENSCPBG00000020685UPF3B8838.519Chrysemys_picta_bellii
ENSPTRG00000041187-8158.082ENSCGRG00001017387Upf3a8457.967Cricetulus_griseus_chok1gshd
ENSPTRG00000041187-8158.082ENSCGRG00000001468Upf3a8457.967Cricetulus_griseus_crigri
ENSPTRG00000041187-8538.025ENSCSEG00000002046upf3b8638.756Cynoglossus_semilaevis
ENSPTRG00000041187-8648.698ENSCSEG00000005106upf3a8148.958Cynoglossus_semilaevis
ENSPTRG00000041187-8745.269ENSCVAG00000022333upf3a8248.082Cyprinodon_variegatus
ENSPTRG00000041187-9046.172ENSDARG00000069297upf3a9046.377Danio_rerio
ENSPTRG00000041187-7965.181ENSDNOG00000034391UPF3A8065.915Dasypus_novemcinctus
ENSPTRG00000041187-8640.355ENSDORG00000006077Upf3b8340.000Dipodomys_ordii
ENSPTRG00000041187-8283.333ENSETEG00000010110UPF3A8454.279Echinops_telfairi
ENSPTRG00000041187-9039.663ENSEASG00005012919UPF3B7670.968Equus_asinus_asinus
ENSPTRG00000041187-9856.433ENSEASG00005021884UPF3A8760.911Equus_asinus_asinus
ENSPTRG00000041187-9160.432ENSECAG00000017141UPF3A8760.671Equus_caballus
ENSPTRG00000041187-9039.663ENSECAG00000016947UPF3B7661.905Equus_caballus
ENSPTRG00000041187-8648.942ENSELUG00000011050upf3a8149.471Esox_lucius
ENSPTRG00000041187-5047.107ENSFCAG00000004388UPF3B8338.806Felis_catus
ENSPTRG00000041187-9170.479ENSFCAG00000014602UPF3A8470.479Felis_catus
ENSPTRG00000041187-6449.738ENSFALG00000001569UPF3B6855.128Ficedula_albicollis
ENSPTRG00000041187-9238.095ENSFDAG00000018869UPF3B8338.346Fukomys_damarensis
ENSPTRG00000041187-7348.214ENSGMOG00000019615upf3a10047.619Gadus_morhua
ENSPTRG00000041187-8636.207ENSGMOG00000001621upf3b8836.817Gadus_morhua
ENSPTRG00000041187-8745.153ENSGAFG00000021170upf3a8248.469Gambusia_affinis
ENSPTRG00000041187-8437.468ENSGACG00000017435upf3b8739.558Gasterosteus_aculeatus
ENSPTRG00000041187-7342.090ENSGACG00000001972upf3a10045.970Gasterosteus_aculeatus
ENSPTRG00000041187-9335.280ENSGAGG00000001219UPF3B8539.401Gopherus_agassizii
ENSPTRG00000041187-5047.107ENSGGOG00000023995UPF3B8338.442Gorilla_gorilla
ENSPTRG00000041187-9986.064ENSGGOG00000043074-9885.821Gorilla_gorilla
ENSPTRG00000041187-10092.647ENSGGOG00000041219-10092.647Gorilla_gorilla
ENSPTRG00000041187-9191.733ENSGGOG00000015428UPF3A9485.885Gorilla_gorilla
ENSPTRG00000041187-8545.195ENSHBUG00000011325upf3a8048.571Haplochromis_burtoni
ENSPTRG00000041187-7160.372ENSHGLG00000001544UPF3A7460.372Heterocephalus_glaber_female
ENSPTRG00000041187-5639.179ENSHGLG00000011189-8135.693Heterocephalus_glaber_female
ENSPTRG00000041187-9237.471ENSHGLG00000019582-9336.486Heterocephalus_glaber_female
ENSPTRG00000041187-7160.372ENSHGLG00100013244UPF3A7460.372Heterocephalus_glaber_male
ENSPTRG00000041187-9137.296ENSHGLG00100002042-9236.735Heterocephalus_glaber_male
ENSPTRG00000041187-5639.179ENSHGLG00100001889-8135.608Heterocephalus_glaber_male
ENSPTRG00000041187-8639.043ENSHCOG00000017004upf3b8636.456Hippocampus_comes
ENSPTRG00000041187-8944.059ENSHCOG00000013985upf3a6660.510Hippocampus_comes
ENSPTRG00000041187-8745.641ENSIPUG00000023450upf3a8348.974Ictalurus_punctatus
ENSPTRG00000041187-8639.796ENSSTOG00000001101UPF3B8339.447Ictidomys_tridecemlineatus
ENSPTRG00000041187-5047.521ENSJJAG00000000053Upf3b8338.168Jaculus_jaculus
ENSPTRG00000041187-8743.864ENSKMAG00000004381upf3a8247.120Kryptolebias_marmoratus
ENSPTRG00000041187-8648.936ENSLBEG00000021570upf3a8149.347Labrus_bergylta
ENSPTRG00000041187-5040.945ENSLBEG00000028689upf3b5242.678Labrus_bergylta
ENSPTRG00000041187-6945.695ENSLACG00000006645UPF3A9145.395Latimeria_chalumnae
ENSPTRG00000041187-8638.795ENSLACG00000008691UPF3B8738.499Latimeria_chalumnae
ENSPTRG00000041187-9248.649ENSLOCG00000002665upf3a8849.512Lepisosteus_oculatus
ENSPTRG00000041187-9152.982ENSLAFG00000023358UPF3A9951.826Loxodonta_africana
ENSPTRG00000041187-8638.945ENSLAFG00000001267UPF3B8337.845Loxodonta_africana
ENSPTRG00000041187-9778.155ENSMFAG00000045016UPF3A9081.265Macaca_fascicularis
ENSPTRG00000041187-8639.698ENSMFAG00000045414UPF3B7353.797Macaca_fascicularis
ENSPTRG00000041187-9980.929ENSMMUG00000007449UPF3A9683.459Macaca_mulatta
ENSPTRG00000041187-8639.698ENSMMUG00000020222UPF3B7353.797Macaca_mulatta
ENSPTRG00000041187-8639.698ENSMNEG00000039794UPF3B7353.797Macaca_nemestrina
ENSPTRG00000041187-9986.410ENSMNEG00000036402UPF3A8689.446Macaca_nemestrina
ENSPTRG00000041187-9288.089ENSMLEG00000014726UPF3A10089.474Mandrillus_leucophaeus
ENSPTRG00000041187-8639.698ENSMLEG00000010999UPF3B7353.797Mandrillus_leucophaeus
ENSPTRG00000041187-8643.878ENSMAMG00000018364upf3a8147.132Mastacembelus_armatus
ENSPTRG00000041187-8543.176ENSMZEG00005021571upf3a8146.402Maylandia_zebra
ENSPTRG00000041187-8751.990ENSMGAG00000014837UPF3A9954.975Meleagris_gallopavo
ENSPTRG00000041187-8639.250ENSMAUG00000008705Upf3b8341.542Mesocricetus_auratus
ENSPTRG00000041187-5761.423ENSMOCG00000000550Upf3a7261.654Microtus_ochrogaster
ENSPTRG00000041187-9042.280ENSMMOG00000019751upf3a8545.368Mola_mola
ENSPTRG00000041187-8638.596ENSMODG00000010232UPF3B9239.599Monodelphis_domestica
ENSPTRG00000041187-9155.896ENSMODG00000003159UPF3A9958.726Monodelphis_domestica
ENSPTRG00000041187-8738.346MGP_CAROLIEiJ_G0032999Upf3b8438.575Mus_caroli
ENSPTRG00000041187-8157.418MGP_CAROLIEiJ_G0030848Upf3a8357.835Mus_caroli
ENSPTRG00000041187-8158.242ENSMUSG00000038398Upf3a8458.516Mus_musculus
ENSPTRG00000041187-8737.437ENSMUSG00000036572Upf3b8438.821Mus_musculus
ENSPTRG00000041187-8156.983MGP_PahariEiJ_G0021311Upf3a8457.967Mus_pahari
ENSPTRG00000041187-8837.531MGP_PahariEiJ_G0031543Upf3b8438.575Mus_pahari
ENSPTRG00000041187-8737.437MGP_SPRETEiJ_G0034152Upf3b8438.821Mus_spretus
ENSPTRG00000041187-8157.692MGP_SPRETEiJ_G0031958Upf3a8457.967Mus_spretus
ENSPTRG00000041187-8639.698ENSMPUG00000001531UPF3B8539.196Mustela_putorius_furo
ENSPTRG00000041187-8963.568ENSMPUG00000009139UPF3A8263.819Mustela_putorius_furo
ENSPTRG00000041187-9039.048ENSMLUG00000010821UPF3B8738.810Myotis_lucifugus
ENSPTRG00000041187-9163.183ENSMLUG00000015905UPF3A10063.183Myotis_lucifugus
ENSPTRG00000041187-8656.888ENSNGAG00000019314Upf3a9053.453Nannospalax_galili
ENSPTRG00000041187-8544.935ENSNBRG00000000828upf3a8048.312Neolamprologus_brichardi
ENSPTRG00000041187-9190.933ENSNLEG00000007563UPF3A9484.928Nomascus_leucogenys
ENSPTRG00000041187-5047.107ENSNLEG00000014897UPF3B8339.447Nomascus_leucogenys
ENSPTRG00000041187-8739.196ENSODEG00000002186-8338.442Octodon_degus
ENSPTRG00000041187-8544.444ENSONIG00000006817upf3a8047.804Oreochromis_niloticus
ENSPTRG00000041187-9137.963ENSOANG00000002594-9838.318Ornithorhynchus_anatinus
ENSPTRG00000041187-8162.763ENSOANG00000006985-9566.366Ornithorhynchus_anatinus
ENSPTRG00000041187-9254.342ENSOCUG00000008450UPF3A8554.342Oryctolagus_cuniculus
ENSPTRG00000041187-8746.373ENSORLG00000010911upf3a8147.044Oryzias_latipes
ENSPTRG00000041187-5041.463ENSORLG00000001026upf3b8735.872Oryzias_latipes
ENSPTRG00000041187-5041.463ENSORLG00020003758upf3b8735.396Oryzias_latipes_hni
ENSPTRG00000041187-8646.791ENSORLG00020014317upf3a8046.736Oryzias_latipes_hni
ENSPTRG00000041187-5041.463ENSORLG00015012954upf3b8735.149Oryzias_latipes_hsok
ENSPTRG00000041187-8646.809ENSOMEG00000014425upf3a8146.494Oryzias_melastigma
ENSPTRG00000041187-8639.152ENSOGAG00000033003-8539.152Otolemur_garnettii
ENSPTRG00000041187-8938.810ENSOGAG00000004643-9736.774Otolemur_garnettii
ENSPTRG00000041187-7760.745ENSOGAG00000004788UPF3A8364.756Otolemur_garnettii
ENSPTRG00000041187-9558.042ENSOARG00000009004UPF3A8760.145Ovis_aries
ENSPTRG00000041187-8637.306ENSOARG00000007869-9134.896Ovis_aries
ENSPTRG00000041187-5047.107ENSPPAG00000040390UPF3B8338.442Pan_paniscus
ENSPTRG00000041187-9184.804ENSPPAG00000042267UPF3A9578.889Pan_paniscus
ENSPTRG00000041187-9169.947ENSPPRG00000025062UPF3A8469.947Panthera_pardus
ENSPTRG00000041187-8639.447ENSPPRG00000023536UPF3B8338.693Panthera_pardus
ENSPTRG00000041187-5047.107ENSPTIG00000015264UPF3B8338.107Panthera_tigris_altaica
ENSPTRG00000041187-8639.698ENSPANG00000000900UPF3B7353.797Papio_anubis
ENSPTRG00000041187-9287.569ENSPANG00000004346UPF3A9480.336Papio_anubis
ENSPTRG00000041187-8637.500ENSPKIG00000019226upf3b8738.575Paramormyrops_kingsleyae
ENSPTRG00000041187-9244.091ENSPKIG00000004422upf3a9345.261Paramormyrops_kingsleyae
ENSPTRG00000041187-9254.501ENSPSIG00000007468UPF3A10058.151Pelodiscus_sinensis
ENSPTRG00000041187-8640.786ENSPMGG00000012696upf3a8245.592Periophthalmus_magnuspinnatus
ENSPTRG00000041187-8738.250ENSPEMG00000012352Upf3b8439.216Peromyscus_maniculatus_bairdii
ENSPTRG00000041187-8160.000ENSPEMG00000019968-8459.615Peromyscus_maniculatus_bairdii
ENSPTRG00000041187-8639.695ENSPCIG00000028914UPF3B8239.494Phascolarctos_cinereus
ENSPTRG00000041187-7565.761ENSPCIG00000019590-7771.875Phascolarctos_cinereus
ENSPTRG00000041187-8746.173ENSPFOG00000013222upf3a8249.490Poecilia_formosa
ENSPTRG00000041187-8745.524ENSPLAG00000011960upf3a8348.849Poecilia_latipinna
ENSPTRG00000041187-8743.689ENSPMEG00000000836upf3a8247.087Poecilia_mexicana
ENSPTRG00000041187-9181.618ENSPPYG00000005536UPF3A9578.936Pongo_abelii
ENSPTRG00000041187-6758.537ENSPCAG00000013124UPF3A6460.000Procavia_capensis
ENSPTRG00000041187-9039.762ENSPCOG00000021960UPF3B8738.333Propithecus_coquereli
ENSPTRG00000041187-9132.127ENSPVAG00000014075UPF3B8931.828Pteropus_vampyrus
ENSPTRG00000041187-9159.024ENSPVAG00000005656UPF3A9154.943Pteropus_vampyrus
ENSPTRG00000041187-8543.176ENSPNYG00000011289upf3a8146.402Pundamilia_nyererei
ENSPTRG00000041187-8745.918ENSPNAG00000019532upf3a8349.347Pygocentrus_nattereri
ENSPTRG00000041187-8836.557ENSPNAG00000021528upf3b8936.516Pygocentrus_nattereri
ENSPTRG00000041187-7560.117ENSRNOG00000017397Upf3a8159.824Rattus_norvegicus
ENSPTRG00000041187-9288.089ENSRBIG00000034007UPF3A9685.195Rhinopithecus_bieti
ENSPTRG00000041187-5047.107ENSRROG00000041031UPF3B7353.797Rhinopithecus_roxellana
ENSPTRG00000041187-9288.089ENSRROG00000012212UPF3A8489.474Rhinopithecus_roxellana
ENSPTRG00000041187-8285.503ENSSBOG00000029989UPF3A8385.207Saimiri_boliviensis_boliviensis
ENSPTRG00000041187-8639.744ENSSBOG00000019740UPF3B7454.487Saimiri_boliviensis_boliviensis
ENSPTRG00000041187-8541.353ENSSHAG00000008634UPF3B8839.202Sarcophilus_harrisii
ENSPTRG00000041187-9157.178ENSSHAG00000009895UPF3A9860.097Sarcophilus_harrisii
ENSPTRG00000041187-5643.333ENSSFOG00015005614upf3b8738.889Scleropages_formosus
ENSPTRG00000041187-9245.038ENSSFOG00015021851upf3a8847.619Scleropages_formosus
ENSPTRG00000041187-5042.520ENSSMAG00000012913upf3b8835.646Scophthalmus_maximus
ENSPTRG00000041187-8942.584ENSSDUG00000009680upf3a8545.694Seriola_dumerili
ENSPTRG00000041187-8944.279ENSSLDG00000009700upf3a8447.512Seriola_lalandi_dorsalis
ENSPTRG00000041187-8191.429ENSSARG00000007262UPF3A9753.731Sorex_araneus
ENSPTRG00000041187-8637.659ENSSPUG00000013082UPF3B8237.688Sphenodon_punctatus
ENSPTRG00000041187-8545.692ENSSPAG00000007938upf3a8258.989Stegastes_partitus
ENSPTRG00000041187-9038.480ENSSSCG00000012617UPF3B8737.381Sus_scrofa
ENSPTRG00000041187-9164.062ENSSSCG00000024679UPF3A8864.477Sus_scrofa
ENSPTRG00000041187-8555.497ENSTGUG00000009493UPF3A9758.639Taeniopygia_guttata
ENSPTRG00000041187-9036.993ENSTGUG00000003413UPF3B9538.221Taeniopygia_guttata
ENSPTRG00000041187-8639.753ENSTRUG00000010645upf3b8738.119Takifugu_rubripes
ENSPTRG00000041187-8644.652ENSTRUG00000012730upf3a8148.128Takifugu_rubripes
ENSPTRG00000041187-8645.238ENSTNIG00000014973upf3a9644.845Tetraodon_nigroviridis
ENSPTRG00000041187-7246.933ENSTBEG00000017186-9946.626Tupaia_belangeri
ENSPTRG00000041187-8260.322ENSTTRG00000015414UPF3A7860.054Tursiops_truncatus
ENSPTRG00000041187-9037.500ENSUAMG00000024565UPF3B7669.355Ursus_americanus
ENSPTRG00000041187-9036.077ENSUMAG00000002150UPF3B8837.740Ursus_maritimus
ENSPTRG00000041187-9162.347ENSVPAG00000003525UPF3A10062.103Vicugna_pacos
ENSPTRG00000041187-8959.799ENSVVUG00000013538UPF3A8060.050Vulpes_vulpes
ENSPTRG00000041187-9037.981ENSVVUG00000011594UPF3B7674.242Vulpes_vulpes
ENSPTRG00000041187-8639.646ENSXETG00000007440upf3b8739.086Xenopus_tropicalis
ENSPTRG00000041187-9149.010ENSXETG00000002572upf3a8850.802Xenopus_tropicalis
ENSPTRG00000041187-6155.333ENSXCOG00000018591upf3a6455.333Xiphophorus_couchianus
ENSPTRG00000041187-8635.162ENSXMAG00000013680upf3b8737.376Xiphophorus_maculatus
ENSPTRG00000041187-8745.408ENSXMAG00000013452upf3a8248.724Xiphophorus_maculatus

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