EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTRG00000041835 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Pan_troglodytes
Status
putative
Strand
Minus strand
Length
1887 bases
Position
chr17:37895961-37897847
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTRP00000070767Smg4_UPF3PF03467.152.8e-2512
ENSPTRP00000070767Smg4_UPF3PF03467.152.8e-2522
ENSPTRP00000061197Smg4_UPF3PF03467.153.5e-2511
ENSPTRP00000077946Smg4_UPF3PF03467.153.6e-2511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTRT00000075446-1209-ENSPTRP00000061197402 (aa)-H2RI40
ENSPTRT00000085007-1215-ENSPTRP00000077946404 (aa)-A0A2I3SN51
ENSPTRT00000089812-1143-ENSPTRP00000070767380 (aa)-A0A2I3S1E7
Gene Model
Click here to download ENSPTRG00000041835's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000041835's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTRG00000041835-9587.339ENSPTRG00000051640-9787.792
ENSPTRG00000041835-5146.281ENSPTRG00000022228UPF3B8339.447
ENSPTRG00000041835-9090.400ENSPTRG00000006073UPF3A9582.506
ENSPTRG00000041835-9997.059ENSPTRG00000041187-10097.059
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTRG00000041835-5146.281ENSG00000125351UPF3B7254.140Homo_sapiens
ENSPTRG00000041835-9090.667ENSG00000169062UPF3A9583.255Homo_sapiens
ENSPTRG00000041835-8538.702ENSAPOG00000012775upf3b8739.706Acanthochromis_polyacanthus
ENSPTRG00000041835-9261.244ENSAMEG00000004259UPF3A9262.440Ailuropoda_melanoleuca
ENSPTRG00000041835-9038.095ENSAMEG00000000163UPF3B8739.048Ailuropoda_melanoleuca
ENSPTRG00000041835-8636.993ENSAOCG00000000706upf3b8738.519Amphiprion_ocellaris
ENSPTRG00000041835-8549.468ENSATEG00000005843upf3a8049.202Anabas_testudineus
ENSPTRG00000041835-8637.850ENSATEG00000018742upf3b8638.710Anabas_testudineus
ENSPTRG00000041835-9237.736ENSACAG00000003625UPF3B8439.043Anolis_carolinensis
ENSPTRG00000041835-8855.838ENSACAG00000001540UPF3A9356.186Anolis_carolinensis
ENSPTRG00000041835-9082.133ENSANAG00000021713UPF3A9575.472Aotus_nancymaae
ENSPTRG00000041835-8639.231ENSANAG00000025598-6769.355Aotus_nancymaae
ENSPTRG00000041835-8639.231ENSANAG00000021894-7353.797Aotus_nancymaae
ENSPTRG00000041835-9145.098ENSAMXG00000002608upf3a8946.455Astyanax_mexicanus
ENSPTRG00000041835-9083.733ENSCJAG00000019102UPF3A9575.943Callithrix_jacchus
ENSPTRG00000041835-8639.487ENSCJAG00000004975UPF3B7353.797Callithrix_jacchus
ENSPTRG00000041835-9037.413ENSCAFG00000018426UPF3B8540.452Canis_familiaris
ENSPTRG00000041835-9656.808ENSCAFG00000006504UPF3A8660.553Canis_familiaris
ENSPTRG00000041835-9657.277ENSCAFG00020014268UPF3A8360.804Canis_lupus_dingo
ENSPTRG00000041835-9038.945ENSCAFG00020004074UPF3B7774.242Canis_lupus_dingo
ENSPTRG00000041835-8437.470ENSCHIG00000018011-5154.140Capra_hircus
ENSPTRG00000041835-9258.680ENSCHIG00000008682UPF3A8557.834Capra_hircus
ENSPTRG00000041835-8833.514ENSCHIG00000011454-8633.154Capra_hircus
ENSPTRG00000041835-9038.278ENSTSYG00000014690UPF3B8738.756Carlito_syrichta
ENSPTRG00000041835-8158.651ENSTSYG00000001918UPF3A10060.465Carlito_syrichta
ENSPTRG00000041835-7557.184ENSCPOG00000006824UPF3A7956.977Cavia_porcellus
ENSPTRG00000041835-8432.410ENSCCAG00000029813-8232.964Cebus_capucinus
ENSPTRG00000041835-9084.267ENSCCAG00000018406UPF3A9576.651Cebus_capucinus
ENSPTRG00000041835-8439.196ENSCATG00000017506UPF3B7353.797Cercocebus_atys
ENSPTRG00000041835-9288.674ENSCATG00000029733UPF3A9578.910Cercocebus_atys
ENSPTRG00000041835-8837.046ENSCLAG00000003260UPF3B8737.981Chinchilla_lanigera
ENSPTRG00000041835-9276.382ENSCSAG00000017388UPF3A9571.179Chlorocebus_sabaeus
ENSPTRG00000041835-8936.650ENSCPBG00000020685UPF3B8838.177Chrysemys_picta_bellii
ENSPTRG00000041835-5743.525ENSCGRG00001013643-6347.845Cricetulus_griseus_chok1gshd
ENSPTRG00000041835-8157.746ENSCGRG00001017387Upf3a8457.465Cricetulus_griseus_chok1gshd
ENSPTRG00000041835-8157.746ENSCGRG00000001468Upf3a8457.465Cricetulus_griseus_crigri
ENSPTRG00000041835-8537.871ENSCSEG00000002046upf3b8638.756Cynoglossus_semilaevis
ENSPTRG00000041835-8744.386ENSCVAG00000022333upf3a8247.258Cyprinodon_variegatus
ENSPTRG00000041835-5240.400ENSDARG00000000489upf3b8937.443Danio_rerio
ENSPTRG00000041835-7962.674ENSDNOG00000034391UPF3A8063.944Dasypus_novemcinctus
ENSPTRG00000041835-8640.458ENSDORG00000006077Upf3b8341.519Dipodomys_ordii
ENSPTRG00000041835-8183.333ENSETEG00000010110UPF3A8452.323Echinops_telfairi
ENSPTRG00000041835-9039.130ENSEASG00005012919UPF3B7670.968Equus_asinus_asinus
ENSPTRG00000041835-10055.150ENSEASG00005021884UPF3A9654.936Equus_asinus_asinus
ENSPTRG00000041835-9039.130ENSECAG00000016947UPF3B7861.905Equus_caballus
ENSPTRG00000041835-10054.936ENSECAG00000017141UPF3A9654.721Equus_caballus
ENSPTRG00000041835-9266.223ENSFCAG00000014602UPF3A8468.085Felis_catus
ENSPTRG00000041835-5145.868ENSFCAG00000004388UPF3B8339.552Felis_catus
ENSPTRG00000041835-6649.738ENSFALG00000001569UPF3B6855.128Ficedula_albicollis
ENSPTRG00000041835-9237.381ENSFDAG00000018869UPF3B8339.098Fukomys_damarensis
ENSPTRG00000041835-7247.095ENSGMOG00000019615upf3a10045.833Gadus_morhua
ENSPTRG00000041835-8536.207ENSGMOG00000001621upf3b8836.730Gadus_morhua
ENSPTRG00000041835-8336.709ENSGACG00000017435upf3b8738.916Gasterosteus_aculeatus
ENSPTRG00000041835-9235.514ENSGAGG00000001219UPF3B8540.150Gopherus_agassizii
ENSPTRG00000041835-9985.749ENSGGOG00000043074-9885.500Gorilla_gorilla
ENSPTRG00000041835-5146.281ENSGGOG00000023995UPF3B8339.447Gorilla_gorilla
ENSPTRG00000041835-9993.284ENSGGOG00000041219-10093.284Gorilla_gorilla
ENSPTRG00000041835-9090.667ENSGGOG00000015428UPF3A9583.255Gorilla_gorilla
ENSPTRG00000041835-9236.782ENSHGLG00000019582-9337.162Heterocephalus_glaber_female
ENSPTRG00000041835-5437.681ENSHGLG00000011189-9133.246Heterocephalus_glaber_female
ENSPTRG00000041835-6955.728ENSHGLG00000001544UPF3A7459.443Heterocephalus_glaber_female
ENSPTRG00000041835-6955.728ENSHGLG00100013244UPF3A7459.443Heterocephalus_glaber_male
ENSPTRG00000041835-8935.748ENSHGLG00100002042-9237.415Heterocephalus_glaber_male
ENSPTRG00000041835-5437.681ENSHGLG00100001889-9133.158Heterocephalus_glaber_male
ENSPTRG00000041835-8536.935ENSHCOG00000017004upf3b8638.596Hippocampus_comes
ENSPTRG00000041835-8744.503ENSIPUG00000023450upf3a8348.168Ictalurus_punctatus
ENSPTRG00000041835-8639.031ENSSTOG00000001101UPF3B8340.201Ictidomys_tridecemlineatus
ENSPTRG00000041835-6141.611ENSJJAG00000000053Upf3b8339.798Jaculus_jaculus
ENSPTRG00000041835-8743.717ENSKMAG00000004381upf3a8247.382Kryptolebias_marmoratus
ENSPTRG00000041835-8445.989ENSLBEG00000021570upf3a8149.863Labrus_bergylta
ENSPTRG00000041835-6846.026ENSLACG00000006645UPF3A9142.593Latimeria_chalumnae
ENSPTRG00000041835-8537.530ENSLACG00000008691UPF3B8740.580Latimeria_chalumnae
ENSPTRG00000041835-9248.894ENSLOCG00000002665upf3a8848.894Lepisosteus_oculatus
ENSPTRG00000041835-9251.606ENSLAFG00000023358UPF3A9951.954Loxodonta_africana
ENSPTRG00000041835-8638.191ENSLAFG00000001267UPF3B8338.734Loxodonta_africana
ENSPTRG00000041835-9775.962ENSMFAG00000045016UPF3A9078.795Macaca_fascicularis
ENSPTRG00000041835-8439.196ENSMFAG00000045414UPF3B7353.797Macaca_fascicularis
ENSPTRG00000041835-9980.929ENSMMUG00000007449UPF3A9682.707Macaca_mulatta
ENSPTRG00000041835-8439.196ENSMMUG00000020222UPF3B7353.797Macaca_mulatta
ENSPTRG00000041835-9986.410ENSMNEG00000036402UPF3A8688.654Macaca_nemestrina
ENSPTRG00000041835-8439.196ENSMNEG00000039794UPF3B7353.797Macaca_nemestrina
ENSPTRG00000041835-9288.089ENSMLEG00000014726UPF3A10088.643Mandrillus_leucophaeus
ENSPTRG00000041835-8439.196ENSMLEG00000010999UPF3B7353.797Mandrillus_leucophaeus
ENSPTRG00000041835-8543.367ENSMAMG00000018364upf3a8146.429Mastacembelus_armatus
ENSPTRG00000041835-8753.865ENSMGAG00000014837UPF3A9953.980Meleagris_gallopavo
ENSPTRG00000041835-9436.018ENSMAUG00000008705Upf3b8341.791Mesocricetus_auratus
ENSPTRG00000041835-5561.089ENSMOCG00000000550Upf3a7261.089Microtus_ochrogaster
ENSPTRG00000041835-9254.245ENSMODG00000003159UPF3A9957.547Monodelphis_domestica
ENSPTRG00000041835-8538.596ENSMODG00000010232UPF3B9240.500Monodelphis_domestica
ENSPTRG00000041835-8737.940MGP_CAROLIEiJ_G0032999Upf3b8438.765Mus_caroli
ENSPTRG00000041835-8158.120MGP_CAROLIEiJ_G0030848Upf3a8358.120Mus_caroli
ENSPTRG00000041835-8636.683ENSMUSG00000036572Upf3b8439.312Mus_musculus
ENSPTRG00000041835-8157.183ENSMUSG00000038398Upf3a8457.465Mus_musculus
ENSPTRG00000041835-8157.746MGP_PahariEiJ_G0021311Upf3a8457.746Mus_pahari
ENSPTRG00000041835-8737.037MGP_PahariEiJ_G0031543Upf3b8439.066Mus_pahari
ENSPTRG00000041835-8156.901MGP_SPRETEiJ_G0031958Upf3a8456.901Mus_spretus
ENSPTRG00000041835-8636.683MGP_SPRETEiJ_G0034152Upf3b8439.312Mus_spretus
ENSPTRG00000041835-8638.442ENSMPUG00000001531UPF3B8539.950Mustela_putorius_furo
ENSPTRG00000041835-8961.772ENSMPUG00000009139UPF3A8262.563Mustela_putorius_furo
ENSPTRG00000041835-9037.589ENSMLUG00000010821UPF3B8737.767Myotis_lucifugus
ENSPTRG00000041835-9260.570ENSMLUG00000015905UPF3A10061.283Myotis_lucifugus
ENSPTRG00000041835-8155.710ENSNGAG00000019314Upf3a9055.243Nannospalax_galili
ENSPTRG00000041835-5146.281ENSNLEG00000014897UPF3B8340.201Nomascus_leucogenys
ENSPTRG00000041835-9089.867ENSNLEG00000007563UPF3A9582.311Nomascus_leucogenys
ENSPTRG00000041835-9236.993ENSODEG00000002186-8339.196Octodon_degus
ENSPTRG00000041835-9037.644ENSOANG00000002594-9837.705Ornithorhynchus_anatinus
ENSPTRG00000041835-7961.261ENSOANG00000006985-9564.865Ornithorhynchus_anatinus
ENSPTRG00000041835-9249.386ENSOCUG00000008450UPF3A8552.709Oryctolagus_cuniculus
ENSPTRG00000041835-8745.855ENSORLG00000010911upf3a8146.316Oryzias_latipes
ENSPTRG00000041835-5141.463ENSORLG00000001026upf3b8736.634Oryzias_latipes
ENSPTRG00000041835-5141.057ENSORLG00020003758upf3b8736.139Oryzias_latipes_hni
ENSPTRG00000041835-8745.526ENSORLG00020014317upf3a8045.989Oryzias_latipes_hni
ENSPTRG00000041835-5141.463ENSORLG00015012954upf3b8736.386Oryzias_latipes_hsok
ENSPTRG00000041835-8542.819ENSOMEG00000014425upf3a8146.011Oryzias_melastigma
ENSPTRG00000041835-8838.095ENSOGAG00000004643-8739.762Otolemur_garnettii
ENSPTRG00000041835-7563.037ENSOGAG00000004788UPF3A8362.899Otolemur_garnettii
ENSPTRG00000041835-8639.000ENSOGAG00000033003-8539.750Otolemur_garnettii
ENSPTRG00000041835-9457.576ENSOARG00000009004UPF3A8759.420Ovis_aries
ENSPTRG00000041835-8635.156ENSOARG00000007869-9135.389Ovis_aries
ENSPTRG00000041835-5146.281ENSPPAG00000040390UPF3B8339.447Pan_paniscus
ENSPTRG00000041835-9083.578ENSPPAG00000042267UPF3A9676.974Pan_paniscus
ENSPTRG00000041835-8638.191ENSPPRG00000023536UPF3B8339.447Panthera_pardus
ENSPTRG00000041835-9265.691ENSPPRG00000025062UPF3A8467.553Panthera_pardus
ENSPTRG00000041835-5145.868ENSPTIG00000015264UPF3B6954.487Panthera_tigris_altaica
ENSPTRG00000041835-8439.196ENSPANG00000000900UPF3B7353.797Papio_anubis
ENSPTRG00000041835-9287.569ENSPANG00000004346UPF3A9577.962Papio_anubis
ENSPTRG00000041835-8637.531ENSPKIG00000019226upf3b8739.706Paramormyrops_kingsleyae
ENSPTRG00000041835-8544.416ENSPKIG00000004422upf3a9344.076Paramormyrops_kingsleyae
ENSPTRG00000041835-9254.015ENSPSIG00000007468UPF3A10056.934Pelodiscus_sinensis
ENSPTRG00000041835-8159.155ENSPEMG00000019968-8459.155Peromyscus_maniculatus_bairdii
ENSPTRG00000041835-8737.000ENSPEMG00000012352Upf3b8440.196Peromyscus_maniculatus_bairdii
ENSPTRG00000041835-7765.217ENSPCIG00000019590-7771.250Phascolarctos_cinereus
ENSPTRG00000041835-8539.440ENSPCIG00000028914UPF3B8239.796Phascolarctos_cinereus
ENSPTRG00000041835-8741.787ENSPFOG00000013222upf3a8248.691Poecilia_formosa
ENSPTRG00000041835-8745.144ENSPLAG00000011960upf3a8348.031Poecilia_latipinna
ENSPTRG00000041835-9080.147ENSPPYG00000005536UPF3A9676.586Pongo_abelii
ENSPTRG00000041835-6560.000ENSPCAG00000013124UPF3A7560.000Procavia_capensis
ENSPTRG00000041835-8639.659ENSPCAG00000009464UPF3B8337.470Procavia_capensis
ENSPTRG00000041835-9039.286ENSPCOG00000021960UPF3B8339.447Propithecus_coquereli
ENSPTRG00000041835-9256.341ENSPVAG00000005656UPF3A9155.172Pteropus_vampyrus
ENSPTRG00000041835-9032.579ENSPVAG00000014075UPF3B8931.724Pteropus_vampyrus
ENSPTRG00000041835-8737.055ENSPNAG00000021528upf3b8937.947Pygocentrus_nattereri
ENSPTRG00000041835-8744.909ENSPNAG00000019532upf3a8348.564Pygocentrus_nattereri
ENSPTRG00000041835-6042.960ENSRNOG00000039994Upf3b8537.619Rattus_norvegicus
ENSPTRG00000041835-7459.517ENSRNOG00000017397Upf3a8159.517Rattus_norvegicus
ENSPTRG00000041835-9288.089ENSRBIG00000034007UPF3A9684.416Rhinopithecus_bieti
ENSPTRG00000041835-5146.281ENSRROG00000041031UPF3B7353.797Rhinopithecus_roxellana
ENSPTRG00000041835-9288.089ENSRROG00000012212UPF3A8488.643Rhinopithecus_roxellana
ENSPTRG00000041835-8183.432ENSSBOG00000029989UPF3A8383.136Saimiri_boliviensis_boliviensis
ENSPTRG00000041835-8639.231ENSSBOG00000019740UPF3B7454.487Saimiri_boliviensis_boliviensis
ENSPTRG00000041835-9255.474ENSSHAG00000009895UPF3A9858.881Sarcophilus_harrisii
ENSPTRG00000041835-8540.150ENSSHAG00000008634UPF3B8839.953Sarcophilus_harrisii
ENSPTRG00000041835-9243.325ENSSFOG00015021851upf3a8845.906Scleropages_formosus
ENSPTRG00000041835-5144.490ENSSFOG00015005614upf3b8739.899Scleropages_formosus
ENSPTRG00000041835-8536.058ENSSMAG00000012913upf3b8637.717Scophthalmus_maximus
ENSPTRG00000041835-8843.188ENSSDUG00000009680upf3a8544.498Seriola_dumerili
ENSPTRG00000041835-8091.429ENSSARG00000007262UPF3A9752.985Sorex_araneus
ENSPTRG00000041835-8537.913ENSSPUG00000013082UPF3B8238.677Sphenodon_punctatus
ENSPTRG00000041835-9955.257ENSSSCG00000024679UPF3A8863.017Sus_scrofa
ENSPTRG00000041835-9037.767ENSSSCG00000012617UPF3B8738.095Sus_scrofa
ENSPTRG00000041835-8554.450ENSTGUG00000009493UPF3A9757.592Taeniopygia_guttata
ENSPTRG00000041835-8538.765ENSTRUG00000010645upf3b9434.467Takifugu_rubripes
ENSPTRG00000041835-8543.850ENSTRUG00000012730upf3a8147.326Takifugu_rubripes
ENSPTRG00000041835-8545.040ENSTNIG00000014973upf3a9645.600Tetraodon_nigroviridis
ENSPTRG00000041835-7145.399ENSTBEG00000017186-9947.095Tupaia_belangeri
ENSPTRG00000041835-8159.249ENSTTRG00000015414UPF3A7859.249Tursiops_truncatus
ENSPTRG00000041835-9037.740ENSUAMG00000024565UPF3B7669.355Ursus_americanus
ENSPTRG00000041835-9035.351ENSUMAG00000002150UPF3B8836.451Ursus_maritimus
ENSPTRG00000041835-9260.147ENSVPAG00000003525UPF3A10061.369Vicugna_pacos
ENSPTRG00000041835-9037.260ENSVVUG00000011594UPF3B7774.242Vulpes_vulpes
ENSPTRG00000041835-8957.286ENSVVUG00000013538UPF3A8058.291Vulpes_vulpes
ENSPTRG00000041835-9148.872ENSXETG00000002572upf3a8850.535Xenopus_tropicalis
ENSPTRG00000041835-8540.657ENSXETG00000007440upf3b8740.355Xenopus_tropicalis
ENSPTRG00000041835-6655.333ENSXCOG00000018591upf3a8141.463Xiphophorus_couchianus
ENSPTRG00000041835-8534.644ENSXMAG00000013680upf3b8738.539Xiphophorus_maculatus

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