EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000042791 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 12188 bases
Position: chrY:2046537-2058724
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000090237	RBM1CTR	PF08081.11	1.9e-19	1	1
ENSPTRP00000048388	RBM1CTR	PF08081.11	1.9e-19	1	1
ENSPTRP00000064618	RBM1CTR	PF08081.11	2e-19	1	1
ENSPTRP00000080370	RBM1CTR	PF08081.11	2e-19	1	1
ENSPTRP00000060371	RBM1CTR	PF08081.11	2.1e-19	1	1
ENSPTRP00000080370	RRM_1	PF00076.22	2.1e-21	1	1
ENSPTRP00000090237	RRM_1	PF00076.22	2.1e-21	1	1
ENSPTRP00000048388	RRM_1	PF00076.22	2.1e-21	1	1
ENSPTRP00000064618	RRM_1	PF00076.22	2.3e-21	1	1
ENSPTRP00000060371	RRM_1	PF00076.22	2.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000055811	-	1356	-	ENSPTRP00000048388	451 (aa)	-	H2R5Q9
ENSPTRT00000093892	-	1431	-	ENSPTRP00000080370	476 (aa)	-	A0A2I3SUX2
ENSPTRT00000092843	-	1422	-	ENSPTRP00000064618	473 (aa)	-	A0A2I3RIV2
ENSPTRT00000072634	-	1467	-	ENSPTRP00000060371	488 (aa)	-	H2RFS6
ENSPTRT00000080876	-	1338	-	ENSPTRP00000090237	445 (aa)	-	A0A2I3TLX5

Gene Model

Click here to download ENSPTRG00000042791's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000042791's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000042791	-	100	96.177	ENSPTRG00000046311	-	100	96.177
ENSPTRG00000042791	-	100	93.908	ENSPTRG00000050914	-	100	93.908
ENSPTRG00000042791	-	100	92.857	ENSPTRG00000046270	-	100	92.857
ENSPTRG00000042791	-	73	52.308	ENSPTRG00000052216	-	95	49.000
ENSPTRG00000042791	-	95	57.143	ENSPTRG00000052587	RBMX	92	80.556
ENSPTRG00000042791	-	100	94.600	ENSPTRG00000047385	-	100	94.600
ENSPTRG00000042791	-	100	78.024	ENSPTRG00000049088	-	100	78.024
ENSPTRG00000042791	-	89	48.110	ENSPTRG00000003312	RBMXL2	89	53.817
ENSPTRG00000042791	-	100	98.739	ENSPTRG00000051395	-	100	98.739
ENSPTRG00000042791	-	86	52.778	ENSPTRG00000049750	-	99	55.556
ENSPTRG00000042791	-	100	94.565	ENSPTRG00000043157	-	100	94.565
ENSPTRG00000042791	-	59	55.926	ENSPTRG00000034071	-	98	61.111
ENSPTRG00000042791	-	100	94.565	ENSPTRG00000047951	-	100	94.565
ENSPTRG00000042791	-	100	96.579	ENSPTRG00000051022	-	100	96.579
ENSPTRG00000042791	-	100	90.177	ENSPTRG00000045105	-	100	90.177

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000042791	-	100	91.739	ENSG00000244395	RBMY1D	100	91.739	Homo_sapiens
ENSPTRG00000042791	-	100	92.174	ENSG00000169800	RBMY1F	100	92.174	Homo_sapiens
ENSPTRG00000042791	-	100	91.957	ENSG00000234414	RBMY1A1	100	91.957	Homo_sapiens
ENSPTRG00000042791	-	100	91.522	ENSG00000242389	RBMY1E	100	91.522	Homo_sapiens
ENSPTRG00000042791	-	100	91.751	ENSG00000242875	RBMY1B	100	91.751	Homo_sapiens
ENSPTRG00000042791	-	100	91.952	ENSG00000226941	RBMY1J	100	91.952	Homo_sapiens
ENSPTRG00000042791	-	99	85.388	ENSCSAG00000018304	-	100	67.006	Chlorocebus_sabaeus
ENSPTRG00000042791	-	99	55.761	ENSCSAG00000018310	-	100	55.761	Chlorocebus_sabaeus
ENSPTRG00000042791	-	92	41.369	ENSMUSG00000093987	Gm21704	87	45.594	Mus_musculus
ENSPTRG00000042791	-	92	43.125	ENSMUSG00000096520	Gm3376	87	46.743	Mus_musculus
ENSPTRG00000042791	-	92	41.667	ENSMUSG00000095852	Gm10256	87	45.977	Mus_musculus
ENSPTRG00000042791	-	92	41.369	ENSMUSG00000093918	Gm21677	87	45.594	Mus_musculus
ENSPTRG00000042791	-	92	41.369	ENSMUSG00000094658	Rbmy	87	45.594	Mus_musculus
ENSPTRG00000042791	-	92	41.369	ENSMUSG00000095948	Gm21708	87	45.594	Mus_musculus
ENSPTRG00000042791	-	92	41.667	ENSMUSG00000091987	Gm10352	87	45.977	Mus_musculus
ENSPTRG00000042791	-	92	41.369	ENSMUSG00000102053	Gm4064	87	45.594	Mus_musculus
ENSPTRG00000042791	-	92	41.369	ENSMUSG00000094511	Gm21693	87	45.594	Mus_musculus
ENSPTRG00000042791	-	69	53.333	ENSRNOG00000060963	Rbmy1j	84	48.855	Rattus_norvegicus
ENSPTRG00000042791	-	98	53.047	ENSRBIG00000029066	-	100	62.921	Rhinopithecus_bieti
ENSPTRG00000042791	-	99	81.641	ENSRBIG00000007617	-	99	81.641	Rhinopithecus_bieti
ENSPTRG00000042791	-	99	72.889	ENSRROG00000029740	-	99	73.333	Rhinopithecus_roxellana