EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000042880 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 1238 bases
Position: chr1:111476131-111477368
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000079176	RRM_3	PF08777.11	1.5e-24	1	1
ENSPTRP00000079176	La	PF05383.17	1.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000093964	-	1074	-	ENSPTRP00000079176	357 (aa)	-	A0A2I3SQE3

Gene Model

Click here to download ENSPTRG00000042880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000042880's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000042880	-	100	76.225	ENSPTRG00000012620	SSB	100	76.225

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000042880	-	100	76.225	ENSG00000138385	SSB	100	76.225	Homo_sapiens
ENSPTRG00000042880	-	99	44.089	ENSAPOG00000003448	ssb	100	44.335	Acanthochromis_polyacanthus
ENSPTRG00000042880	-	100	70.714	ENSAMEG00000010507	SSB	100	70.714	Ailuropoda_melanoleuca
ENSPTRG00000042880	-	91	47.326	ENSACIG00000001738	ssb	97	47.200	Amphilophus_citrinellus
ENSPTRG00000042880	-	99	44.581	ENSAOCG00000020398	ssb	100	44.581	Amphiprion_ocellaris
ENSPTRG00000042880	-	99	45.074	ENSAPEG00000020395	ssb	100	45.074	Amphiprion_percula
ENSPTRG00000042880	-	99	47.044	ENSATEG00000016884	ssb	100	47.044	Anabas_testudineus
ENSPTRG00000042880	-	100	53.538	ENSAPLG00000006109	SSB	100	55.869	Anas_platyrhynchos
ENSPTRG00000042880	-	99	52.323	ENSACAG00000017008	SSB	99	53.056	Anolis_carolinensis
ENSPTRG00000042880	-	100	67.654	ENSANAG00000027195	-	100	67.654	Aotus_nancymaae
ENSPTRG00000042880	-	99	45.545	ENSACLG00000010798	ssb	100	45.567	Astatotilapia_calliptera
ENSPTRG00000042880	-	99	44.794	ENSAMXG00000012606	ssb	100	46.024	Astyanax_mexicanus
ENSPTRG00000042880	-	100	73.333	ENSBTAG00000008716	SSB	100	73.333	Bos_taurus
ENSPTRG00000042880	-	100	75.556	ENSCJAG00000045073	SSB	100	75.556	Callithrix_jacchus
ENSPTRG00000042880	-	100	73.892	ENSCAFG00000012418	SSB	100	73.892	Canis_familiaris
ENSPTRG00000042880	-	100	73.892	ENSCAFG00020002900	SSB	100	73.892	Canis_lupus_dingo
ENSPTRG00000042880	-	100	70.398	ENSCHIG00000022196	-	100	70.398	Capra_hircus
ENSPTRG00000042880	-	100	73.333	ENSCHIG00000022624	-	100	73.333	Capra_hircus
ENSPTRG00000042880	-	100	74.550	ENSTSYG00000000097	SSB	100	74.550	Carlito_syrichta
ENSPTRG00000042880	-	100	74.074	ENSCPOG00000003338	SSB	100	74.074	Cavia_porcellus
ENSPTRG00000042880	-	100	76.296	ENSCCAG00000035147	SSB	100	76.296	Cebus_capucinus
ENSPTRG00000042880	-	100	63.049	ENSCATG00000036701	SSB	100	63.049	Cercocebus_atys
ENSPTRG00000042880	-	100	66.667	ENSCATG00000042909	-	100	66.667	Cercocebus_atys
ENSPTRG00000042880	-	100	73.333	ENSCLAG00000015617	-	100	73.333	Chinchilla_lanigera
ENSPTRG00000042880	-	98	75.888	ENSCSAG00000018390	-	100	75.888	Chlorocebus_sabaeus
ENSPTRG00000042880	-	100	76.543	ENSCSAG00000015200	SSB	89	76.543	Chlorocebus_sabaeus
ENSPTRG00000042880	-	100	73.333	ENSCHOG00000007763	SSB	100	73.333	Choloepus_hoffmanni
ENSPTRG00000042880	-	100	58.394	ENSCPBG00000006519	SSB	100	61.614	Chrysemys_picta_bellii
ENSPTRG00000042880	-	98	62.051	ENSCANG00000028838	-	95	62.051	Colobus_angolensis_palliatus
ENSPTRG00000042880	-	99	77.083	ENSCANG00000033240	-	99	77.083	Colobus_angolensis_palliatus
ENSPTRG00000042880	-	100	76.543	ENSCANG00000027695	SSB	100	76.543	Colobus_angolensis_palliatus
ENSPTRG00000042880	-	99	62.990	ENSCGRG00001024831	Ssb	99	63.971	Cricetulus_griseus_chok1gshd
ENSPTRG00000042880	-	99	62.990	ENSCGRG00000005387	Ssb	99	63.971	Cricetulus_griseus_crigri
ENSPTRG00000042880	-	97	46.250	ENSCSEG00000011599	ssb	99	46.250	Cynoglossus_semilaevis
ENSPTRG00000042880	-	99	47.420	ENSCVAG00000021558	ssb	100	47.420	Cyprinodon_variegatus
ENSPTRG00000042880	-	98	45.274	ENSDARG00000029252	ssb	99	46.898	Danio_rerio
ENSPTRG00000042880	-	100	72.840	ENSDNOG00000013450	SSB	100	72.840	Dasypus_novemcinctus
ENSPTRG00000042880	-	100	69.479	ENSDORG00000005543	Ssb	100	69.479	Dipodomys_ordii
ENSPTRG00000042880	-	79	32.012	FBgn0011638	La	83	32.219	Drosophila_melanogaster
ENSPTRG00000042880	-	56	69.036	ENSETEG00000004614	-	60	69.036	Echinops_telfairi
ENSPTRG00000042880	-	96	37.887	ENSEBUG00000001237	ssb	96	37.887	Eptatretus_burgeri
ENSPTRG00000042880	-	100	74.321	ENSEASG00005022835	SSB	100	74.321	Equus_asinus_asinus
ENSPTRG00000042880	-	100	74.568	ENSECAG00000018495	SSB	100	74.568	Equus_caballus
ENSPTRG00000042880	-	72	60.690	ENSEEUG00000008077	SSB	78	60.690	Erinaceus_europaeus
ENSPTRG00000042880	-	99	49.261	ENSELUG00000020929	ssb	100	49.877	Esox_lucius
ENSPTRG00000042880	-	100	74.138	ENSFCAG00000011601	SSB	100	74.138	Felis_catus
ENSPTRG00000042880	-	100	56.098	ENSFALG00000000930	SSB	100	58.293	Ficedula_albicollis
ENSPTRG00000042880	-	100	73.333	ENSFDAG00000000598	SSB	100	73.333	Fukomys_damarensis
ENSPTRG00000042880	-	58	43.777	ENSFHEG00000003268	ssb	95	42.157	Fundulus_heteroclitus
ENSPTRG00000042880	-	97	44.913	ENSGMOG00000002664	ssb	99	45.161	Gadus_morhua
ENSPTRG00000042880	-	99	56.511	ENSGALG00000009677	SSB	99	58.231	Gallus_gallus
ENSPTRG00000042880	-	99	44.581	ENSGAFG00000002749	ssb	100	45.074	Gambusia_affinis
ENSPTRG00000042880	-	99	43.932	ENSGACG00000005107	ssb	100	44.417	Gasterosteus_aculeatus
ENSPTRG00000042880	-	100	57.908	ENSGAGG00000007807	SSB	100	60.391	Gopherus_agassizii
ENSPTRG00000042880	-	55	79.724	ENSGGOG00000023471	-	89	79.724	Gorilla_gorilla
ENSPTRG00000042880	-	100	84.840	ENSGGOG00000024891	-	100	84.840	Gorilla_gorilla
ENSPTRG00000042880	-	99	45.297	ENSHBUG00000006584	ssb	100	45.320	Haplochromis_burtoni
ENSPTRG00000042880	-	100	68.262	ENSHGLG00000005832	-	100	68.262	Heterocephalus_glaber_female
ENSPTRG00000042880	-	100	72.330	ENSHGLG00000017580	-	100	72.330	Heterocephalus_glaber_female
ENSPTRG00000042880	-	100	69.424	ENSHGLG00000004478	-	100	69.424	Heterocephalus_glaber_female
ENSPTRG00000042880	-	59	75.188	ENSHGLG00000011331	-	98	75.188	Heterocephalus_glaber_female
ENSPTRG00000042880	-	100	72.330	ENSHGLG00100003084	-	100	72.330	Heterocephalus_glaber_male
ENSPTRG00000042880	-	100	66.080	ENSHGLG00100008767	-	100	66.080	Heterocephalus_glaber_male
ENSPTRG00000042880	-	97	45.340	ENSHCOG00000019011	ssb	99	45.592	Hippocampus_comes
ENSPTRG00000042880	-	97	46.517	ENSIPUG00000003681	SSB	99	47.030	Ictalurus_punctatus
ENSPTRG00000042880	-	100	74.074	ENSSTOG00000008416	SSB	100	74.074	Ictidomys_tridecemlineatus
ENSPTRG00000042880	-	99	62.233	ENSJJAG00000023158	-	99	62.233	Jaculus_jaculus
ENSPTRG00000042880	-	99	53.435	ENSJJAG00000016250	-	99	53.435	Jaculus_jaculus
ENSPTRG00000042880	-	99	46.059	ENSKMAG00000017317	ssb	100	46.059	Kryptolebias_marmoratus
ENSPTRG00000042880	-	99	44.828	ENSLBEG00000017345	ssb	100	44.828	Labrus_bergylta
ENSPTRG00000042880	-	100	51.961	ENSLACG00000014056	SSB	99	54.768	Latimeria_chalumnae
ENSPTRG00000042880	-	98	52.854	ENSLOCG00000007933	ssb	99	53.350	Lepisosteus_oculatus
ENSPTRG00000042880	-	71	55.068	ENSLAFG00000026721	-	99	55.068	Loxodonta_africana
ENSPTRG00000042880	-	100	66.588	ENSLAFG00000000867	-	100	68.720	Loxodonta_africana
ENSPTRG00000042880	-	100	60.247	ENSLAFG00000028909	-	100	60.247	Loxodonta_africana
ENSPTRG00000042880	-	87	73.591	ENSMFAG00000041478	-	100	73.591	Macaca_fascicularis
ENSPTRG00000042880	-	100	76.790	ENSMFAG00000039066	SSB	100	76.790	Macaca_fascicularis
ENSPTRG00000042880	-	100	76.790	ENSMMUG00000023051	SSB	100	76.790	Macaca_mulatta
ENSPTRG00000042880	-	99	66.759	ENSMMUG00000039889	-	100	67.036	Macaca_mulatta
ENSPTRG00000042880	-	100	75.711	ENSMMUG00000011724	-	97	75.711	Macaca_mulatta
ENSPTRG00000042880	-	87	73.591	ENSMNEG00000034698	-	100	73.591	Macaca_nemestrina
ENSPTRG00000042880	-	100	70.558	ENSMNEG00000028321	SSB	84	88.596	Macaca_nemestrina
ENSPTRG00000042880	-	100	63.636	ENSMLEG00000042644	-	100	63.636	Mandrillus_leucophaeus
ENSPTRG00000042880	-	100	76.790	ENSMLEG00000035717	SSB	100	76.790	Mandrillus_leucophaeus
ENSPTRG00000042880	-	99	48.276	ENSMAMG00000004800	ssb	100	48.276	Mastacembelus_armatus
ENSPTRG00000042880	-	99	45.545	ENSMZEG00005005749	ssb	100	45.567	Maylandia_zebra
ENSPTRG00000042880	-	99	56.757	ENSMGAG00000010328	SSB	99	58.477	Meleagris_gallopavo
ENSPTRG00000042880	-	99	72.194	ENSMICG00000033304	-	98	73.980	Microcebus_murinus
ENSPTRG00000042880	-	99	73.945	ENSMICG00000028252	-	99	75.682	Microcebus_murinus
ENSPTRG00000042880	-	100	60.212	ENSMODG00000019271	-	100	60.212	Monodelphis_domestica
ENSPTRG00000042880	-	100	63.081	ENSMODG00000008227	-	100	63.570	Monodelphis_domestica
ENSPTRG00000042880	-	100	57.029	ENSMODG00000007027	-	100	57.029	Monodelphis_domestica
ENSPTRG00000042880	-	89	49.575	ENSMALG00000008045	ssb	90	49.311	Monopterus_albus
ENSPTRG00000042880	-	99	62.053	MGP_CAROLIEiJ_G0023629	-	98	70.513	Mus_caroli
ENSPTRG00000042880	-	99	61.575	ENSMUSG00000068882	Ssb	98	70.513	Mus_musculus
ENSPTRG00000042880	-	99	61.575	MGP_PahariEiJ_G0025081	-	98	70.513	Mus_pahari
ENSPTRG00000042880	-	99	61.575	MGP_SPRETEiJ_G0024551	Ssb	98	70.513	Mus_spretus
ENSPTRG00000042880	-	100	74.321	ENSMPUG00000000785	SSB	100	74.321	Mustela_putorius_furo
ENSPTRG00000042880	-	100	68.810	ENSMLUG00000016316	SSB	100	68.810	Myotis_lucifugus
ENSPTRG00000042880	-	99	45.545	ENSNBRG00000012661	ssb	100	45.567	Neolamprologus_brichardi
ENSPTRG00000042880	-	100	65.405	ENSNLEG00000028754	-	100	65.676	Nomascus_leucogenys
ENSPTRG00000042880	-	100	76.790	ENSNLEG00000004958	SSB	100	76.790	Nomascus_leucogenys
ENSPTRG00000042880	-	56	63.306	ENSMEUG00000001650	-	100	63.306	Notamacropus_eugenii
ENSPTRG00000042880	-	72	53.846	ENSOPRG00000008475	-	99	54.545	Ochotona_princeps
ENSPTRG00000042880	-	92	68.519	ENSODEG00000004202	-	100	68.519	Octodon_degus
ENSPTRG00000042880	-	99	45.297	ENSONIG00000008776	ssb	100	45.320	Oreochromis_niloticus
ENSPTRG00000042880	-	99	65.099	ENSOANG00000008543	SSB	99	65.099	Ornithorhynchus_anatinus
ENSPTRG00000042880	-	100	73.827	ENSOCUG00000010396	SSB	100	73.827	Oryctolagus_cuniculus
ENSPTRG00000042880	-	99	48.522	ENSORLG00000017208	ssb	100	48.522	Oryzias_latipes
ENSPTRG00000042880	-	99	47.537	ENSORLG00020022574	ssb	100	48.276	Oryzias_latipes_hni
ENSPTRG00000042880	-	99	47.783	ENSORLG00015016592	ssb	100	48.030	Oryzias_latipes_hsok
ENSPTRG00000042880	-	99	47.901	ENSOMEG00000003193	ssb	100	48.642	Oryzias_melastigma
ENSPTRG00000042880	-	100	70.142	ENSOGAG00000029768	SSB	100	70.142	Otolemur_garnettii
ENSPTRG00000042880	-	100	71.358	ENSOARG00000002906	SSB	100	73.333	Ovis_aries
ENSPTRG00000042880	-	96	60.622	ENSPPAG00000006189	-	96	61.140	Pan_paniscus
ENSPTRG00000042880	-	100	76.225	ENSPPAG00000042673	SSB	100	76.225	Pan_paniscus
ENSPTRG00000042880	-	100	93.298	ENSPPAG00000032427	-	100	93.298	Pan_paniscus
ENSPTRG00000042880	-	100	74.138	ENSPPRG00000006599	SSB	100	74.138	Panthera_pardus
ENSPTRG00000042880	-	100	74.138	ENSPTIG00000011021	SSB	97	74.138	Panthera_tigris_altaica
ENSPTRG00000042880	-	100	76.790	ENSPANG00000007440	SSB	100	76.790	Papio_anubis
ENSPTRG00000042880	-	95	61.905	ENSPANG00000031877	-	92	61.905	Papio_anubis
ENSPTRG00000042880	-	100	62.400	ENSPANG00000034126	-	100	63.467	Papio_anubis
ENSPTRG00000042880	-	99	50.370	ENSPKIG00000019325	ssb	99	50.370	Paramormyrops_kingsleyae
ENSPTRG00000042880	-	100	56.691	ENSPSIG00000002265	SSB	93	59.413	Pelodiscus_sinensis
ENSPTRG00000042880	-	83	42.857	ENSPMGG00000020075	ssb	91	44.058	Periophthalmus_magnuspinnatus
ENSPTRG00000042880	-	78	39.815	ENSPMAG00000002982	ssb	89	38.684	Petromyzon_marinus
ENSPTRG00000042880	-	100	62.069	ENSPCIG00000028591	-	100	64.286	Phascolarctos_cinereus
ENSPTRG00000042880	-	99	46.305	ENSPFOG00000009650	ssb	100	46.305	Poecilia_formosa
ENSPTRG00000042880	-	99	46.059	ENSPLAG00000020498	ssb	100	46.059	Poecilia_latipinna
ENSPTRG00000042880	-	99	46.305	ENSPMEG00000001051	ssb	100	46.059	Poecilia_mexicana
ENSPTRG00000042880	-	93	45.312	ENSPREG00000003708	ssb	99	45.833	Poecilia_reticulata
ENSPTRG00000042880	-	100	76.790	ENSPPYG00000012919	SSB	100	76.790	Pongo_abelii
ENSPTRG00000042880	-	94	71.733	ENSPCAG00000010276	SSB	100	71.733	Procavia_capensis
ENSPTRG00000042880	-	100	67.939	ENSPCOG00000023189	-	100	69.720	Propithecus_coquereli
ENSPTRG00000042880	-	100	70.647	ENSPCOG00000015741	-	97	78.689	Propithecus_coquereli
ENSPTRG00000042880	-	86	71.751	ENSPVAG00000006615	SSB	100	71.751	Pteropus_vampyrus
ENSPTRG00000042880	-	99	45.545	ENSPNYG00000006444	ssb	100	45.567	Pundamilia_nyererei
ENSPTRG00000042880	-	99	45.012	ENSPNAG00000011708	ssb	100	45.874	Pygocentrus_nattereri
ENSPTRG00000042880	-	99	62.562	ENSRNOG00000011606	AABR07061825.1	99	62.562	Rattus_norvegicus
ENSPTRG00000042880	-	99	61.337	ENSRNOG00000007998	Ssb	99	61.337	Rattus_norvegicus
ENSPTRG00000042880	-	84	69.341	ENSRBIG00000041608	-	95	69.341	Rhinopithecus_bieti
ENSPTRG00000042880	-	100	63.636	ENSRBIG00000029918	-	100	63.636	Rhinopithecus_bieti
ENSPTRG00000042880	-	92	75.419	ENSRBIG00000041232	-	98	75.419	Rhinopithecus_bieti
ENSPTRG00000042880	-	100	72.559	ENSRBIG00000041972	SSB	87	88.596	Rhinopithecus_bieti
ENSPTRG00000042880	-	100	64.987	ENSRROG00000007149	-	100	64.987	Rhinopithecus_roxellana
ENSPTRG00000042880	-	97	76.533	ENSRROG00000031684	-	99	76.533	Rhinopithecus_roxellana
ENSPTRG00000042880	-	100	76.543	ENSRROG00000040346	SSB	100	76.543	Rhinopithecus_roxellana
ENSPTRG00000042880	-	84	73.352	ENSRROG00000034102	-	98	66.420	Rhinopithecus_roxellana
ENSPTRG00000042880	-	100	76.790	ENSSBOG00000027204	SSB	100	76.790	Saimiri_boliviensis_boliviensis
ENSPTRG00000042880	-	100	61.823	ENSSHAG00000018062	SSB	100	64.039	Sarcophilus_harrisii
ENSPTRG00000042880	-	99	48.662	ENSSFOG00015000550	ssb	100	51.100	Scleropages_formosus
ENSPTRG00000042880	-	97	44.474	ENSSMAG00000013885	ssb	100	45.478	Scophthalmus_maximus
ENSPTRG00000042880	-	99	45.813	ENSSDUG00000020117	ssb	100	46.059	Seriola_dumerili
ENSPTRG00000042880	-	99	46.770	ENSSLDG00000002525	ssb	100	46.770	Seriola_lalandi_dorsalis
ENSPTRG00000042880	-	94	64.230	ENSSARG00000007747	SSB	100	64.230	Sorex_araneus
ENSPTRG00000042880	-	100	58.824	ENSSPUG00000012112	SSB	100	58.824	Sphenodon_punctatus
ENSPTRG00000042880	-	92	46.702	ENSSPAG00000005696	ssb	98	46.702	Stegastes_partitus
ENSPTRG00000042880	-	99	58.354	ENSSSCG00000015938	SSB	99	58.354	Sus_scrofa
ENSPTRG00000042880	-	100	56.098	ENSTGUG00000007942	SSB	100	58.191	Taeniopygia_guttata
ENSPTRG00000042880	-	99	46.287	ENSTRUG00000017839	ssb	100	46.173	Takifugu_rubripes
ENSPTRG00000042880	-	89	48.361	ENSTNIG00000000915	ssb	99	48.361	Tetraodon_nigroviridis
ENSPTRG00000042880	-	86	88.596	ENSTBEG00000009056	SSB	80	88.596	Tupaia_belangeri
ENSPTRG00000042880	-	100	73.153	ENSTTRG00000002152	SSB	100	73.153	Tursiops_truncatus
ENSPTRG00000042880	-	92	74.271	ENSUAMG00000027833	SSB	99	74.271	Ursus_americanus
ENSPTRG00000042880	-	100	73.645	ENSUMAG00000013907	SSB	100	73.645	Ursus_maritimus
ENSPTRG00000042880	-	100	72.840	ENSVPAG00000007183	SSB	100	72.840	Vicugna_pacos
ENSPTRG00000042880	-	100	73.892	ENSVVUG00000016573	SSB	78	73.892	Vulpes_vulpes
ENSPTRG00000042880	-	96	47.826	ENSXETG00000025402	ssb	99	48.235	Xenopus_tropicalis
ENSPTRG00000042880	-	93	45.383	ENSXCOG00000019109	ssb	99	45.646	Xiphophorus_couchianus
ENSPTRG00000042880	-	99	44.581	ENSXMAG00000004888	ssb	100	44.828	Xiphophorus_maculatus