EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000043157 (Gene tree)
Gene ID: 736145
Gene Symbol: -
Alias: -
Full Name: RNA-binding motif protein%2C Y chromosome%2C family 1 member F/J-like
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 12197 bases
Position: chrY:9088089-9100285
Accession: 736145
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000077131	RBM1CTR	PF08081.11	2e-19	1	1
ENSPTRP00000063209	RBM1CTR	PF08081.11	2.2e-19	1	1
ENSPTRP00000077131	RRM_1	PF00076.22	2.2e-21	1	1
ENSPTRP00000063209	RRM_1	PF00076.22	2.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000079144	-	1515	XM_009445034	ENSPTRP00000063209	504 (aa)	XP_009443309	A0A2I3RE87
ENSPTRT00000087924	-	1383	-	ENSPTRP00000077131	460 (aa)	-	A0A2I3TF85

Gene Model

Click here to download ENSPTRG00000043157's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000043157's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000043157	-	100	92.225	ENSPTRG00000046270	-	100	92.225
ENSPTRG00000043157	-	100	100.000	ENSPTRG00000047951	-	100	100.000
ENSPTRG00000043157	-	82	55.000	ENSPTRG00000049750	-	97	56.250
ENSPTRG00000043157	-	100	93.254	ENSPTRG00000050914	-	100	93.254
ENSPTRG00000043157	-	57	56.667	ENSPTRG00000034071	-	98	61.111
ENSPTRG00000043157	-	100	90.430	ENSPTRG00000047385	-	100	90.430
ENSPTRG00000043157	-	85	50.763	ENSPTRG00000003312	RBMXL2	93	54.231
ENSPTRG00000043157	-	100	91.356	ENSPTRG00000051022	-	100	91.356
ENSPTRG00000043157	-	100	94.565	ENSPTRG00000042791	-	100	94.565
ENSPTRG00000043157	-	100	99.348	ENSPTRG00000051395	-	100	99.348
ENSPTRG00000043157	-	100	92.927	ENSPTRG00000046311	-	100	92.927
ENSPTRG00000043157	-	100	73.387	ENSPTRG00000049088	-	100	71.984
ENSPTRG00000043157	-	93	59.184	ENSPTRG00000052587	RBMX	92	80.556
ENSPTRG00000043157	-	67	53.448	ENSPTRG00000052216	-	95	47.440
ENSPTRG00000043157	-	100	98.413	ENSPTRG00000045105	-	100	98.413

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000043157	-	100	89.587	ENSG00000226941	RBMY1J	100	89.587	Homo_sapiens
ENSPTRG00000043157	-	100	88.998	ENSG00000244395	RBMY1D	100	88.998	Homo_sapiens
ENSPTRG00000043157	-	100	88.802	ENSG00000242389	RBMY1E	100	88.802	Homo_sapiens
ENSPTRG00000043157	-	100	89.194	ENSG00000242875	RBMY1B	100	89.194	Homo_sapiens
ENSPTRG00000043157	-	100	89.587	ENSG00000169800	RBMY1F	100	89.587	Homo_sapiens
ENSPTRG00000043157	-	100	89.194	ENSG00000234414	RBMY1A1	100	89.194	Homo_sapiens
ENSPTRG00000043157	-	99	54.865	ENSCSAG00000018310	-	100	54.865	Chlorocebus_sabaeus
ENSPTRG00000043157	-	87	84.475	ENSCSAG00000018304	-	100	64.128	Chlorocebus_sabaeus
ENSPTRG00000043157	-	90	43.000	ENSMUSG00000093987	Gm21704	93	40.365	Mus_musculus
ENSPTRG00000043157	-	90	43.000	ENSMUSG00000095948	Gm21708	93	40.365	Mus_musculus
ENSPTRG00000043157	-	92	40.104	ENSMUSG00000094511	Gm21693	93	40.104	Mus_musculus
ENSPTRG00000043157	-	90	43.000	ENSMUSG00000102053	Gm4064	93	40.260	Mus_musculus
ENSPTRG00000043157	-	92	41.370	ENSMUSG00000095852	Gm10256	89	41.370	Mus_musculus
ENSPTRG00000043157	-	92	41.370	ENSMUSG00000091987	Gm10352	89	41.370	Mus_musculus
ENSPTRG00000043157	-	90	43.000	ENSMUSG00000094658	Rbmy	93	40.365	Mus_musculus
ENSPTRG00000043157	-	90	43.000	ENSMUSG00000093918	Gm21677	93	40.365	Mus_musculus
ENSPTRG00000043157	-	90	44.000	ENSMUSG00000096520	Gm3376	93	41.146	Mus_musculus
ENSPTRG00000043157	-	72	55.000	ENSRNOG00000060963	Rbmy1j	83	46.875	Rattus_norvegicus
ENSPTRG00000043157	-	99	77.133	ENSRBIG00000007617	-	99	76.512	Rhinopithecus_bieti
ENSPTRG00000043157	-	87	62.921	ENSRBIG00000029066	-	100	50.773	Rhinopithecus_bieti
ENSPTRG00000043157	-	99	78.840	ENSRROG00000029740	-	99	70.806	Rhinopithecus_roxellana