EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000043341 (Gene tree)
Gene ID: 472043
Gene Symbol: RAB23
Alias: -
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 35525 bases
Position: chr6:57910363-57945887
Accession: 472043
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000074236	MMR_HSR1	PF01926.23	7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000098563	RAB23-201	4794	XM_016955735	ENSPTRP00000074236	237 (aa)	XP_016811224	H2QT90

Gene Model

Click here to download ENSPTRG00000043341's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000043341's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000043341	RAB23	63	30.921	ENSPTRG00000034469	HRAS	84	35.172
ENSPTRG00000043341	RAB23	70	36.095	ENSPTRG00000048400	-	79	36.095
ENSPTRG00000043341	RAB23	70	36.095	ENSPTRG00000042083	RAB39B	79	36.095
ENSPTRG00000043341	RAB23	65	30.000	ENSPTRG00000011719	DNAJC27	90	30.000
ENSPTRG00000043341	RAB23	80	34.555	ENSPTRG00000044358	-	88	35.714
ENSPTRG00000043341	RAB23	73	33.526	ENSPTRG00000011989	RAB1A	84	33.526
ENSPTRG00000043341	RAB23	65	35.484	ENSPTRG00000046866	RHEB	84	35.484
ENSPTRG00000043341	RAB23	67	38.125	ENSPTRG00000014682	RAB5A	74	38.125
ENSPTRG00000043341	RAB23	79	32.984	ENSPTRG00000003915	RAB1B	95	32.984
ENSPTRG00000043341	RAB23	67	38.125	ENSPTRG00000005071	RAB5B	74	38.125
ENSPTRG00000043341	RAB23	73	32.961	ENSPTRG00000016455	RAB33B	78	32.961
ENSPTRG00000043341	RAB23	80	35.602	ENSPTRG00000010422	RAB11B	88	35.602
ENSPTRG00000043341	RAB23	73	32.967	ENSPTRG00000016058	RASL11B	72	32.967
ENSPTRG00000043341	RAB23	75	35.955	ENSPTRG00000005524	RAB35	90	35.359
ENSPTRG00000043341	RAB23	66	39.375	ENSPTRG00000008931	RAB34	62	39.375
ENSPTRG00000043341	RAB23	69	38.182	ENSPTRG00000001370	RAB13	81	38.182
ENSPTRG00000043341	RAB23	70	34.337	ENSPTRG00000021312	RAB14	77	34.337
ENSPTRG00000043341	RAB23	65	31.210	ENSPTRG00000047231	-	84	31.210
ENSPTRG00000043341	RAB23	70	35.465	ENSPTRG00000015359	RAB7A	83	35.465
ENSPTRG00000043341	RAB23	71	34.911	ENSPTRG00000020284	RAB2A	80	34.911
ENSPTRG00000043341	RAB23	75	34.807	ENSPTRG00000009853	RAB12	73	34.807
ENSPTRG00000043341	RAB23	66	32.919	ENSPTRG00000004731	RERG	79	32.919
ENSPTRG00000043341	RAB23	75	35.870	ENSPTRG00000028227	RAB9B	88	35.870
ENSPTRG00000043341	RAB23	68	34.731	ENSPTRG00000021673	RAB9A	83	34.731
ENSPTRG00000043341	RAB23	66	39.873	ENSPTRG00000044137	RAB6A	76	39.873
ENSPTRG00000043341	RAB23	65	32.468	ENSPTRG00000044969	RAB22A	79	32.468
ENSPTRG00000043341	RAB23	74	38.068	ENSPTRG00000004125	RAB30	87	38.068
ENSPTRG00000043341	RAB23	94	33.628	ENSPTRG00000014136	RAB36	62	33.628
ENSPTRG00000043341	RAB23	67	32.298	ENSPTRG00000015445	MRAS	80	34.884
ENSPTRG00000043341	RAB23	73	35.838	ENSPTRG00000009194	RAB5C	80	35.838
ENSPTRG00000043341	RAB23	66	41.139	ENSPTRG00000048374	RAB6B	76	41.139
ENSPTRG00000043341	RAB23	67	30.435	ENSPTRG00000004775	KRAS	90	33.721
ENSPTRG00000043341	RAB23	63	31.579	ENSPTRG00000001140	NRAS	88	35.032
ENSPTRG00000043341	RAB23	72	35.465	ENSPTRG00000002384	RAB18	83	35.465
ENSPTRG00000043341	RAB23	73	34.286	ENSPTRG00000001446	RAB25	82	34.286
ENSPTRG00000043341	RAB23	71	36.095	ENSPTRG00000006125	-	93	36.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000043341	RAB23	100	99.578	ENSG00000112210	RAB23	100	99.578	Homo_sapiens
ENSPTRG00000043341	RAB23	99	85.043	ENSAPOG00000008892	rab23	99	85.043	Acanthochromis_polyacanthus
ENSPTRG00000043341	RAB23	100	98.312	ENSAMEG00000006825	RAB23	100	98.312	Ailuropoda_melanoleuca
ENSPTRG00000043341	RAB23	99	73.305	ENSACIG00000020496	rab23	99	73.305	Amphilophus_citrinellus
ENSPTRG00000043341	RAB23	99	84.746	ENSAOCG00000004234	rab23	99	84.746	Amphiprion_ocellaris
ENSPTRG00000043341	RAB23	99	84.746	ENSAPEG00000019758	rab23	99	84.746	Amphiprion_percula
ENSPTRG00000043341	RAB23	99	83.475	ENSATEG00000020913	rab23	99	83.475	Anabas_testudineus
ENSPTRG00000043341	RAB23	74	93.182	ENSAPLG00000003715	RAB23	99	93.182	Anas_platyrhynchos
ENSPTRG00000043341	RAB23	100	90.336	ENSACAG00000006656	RAB23	100	90.336	Anolis_carolinensis
ENSPTRG00000043341	RAB23	100	99.156	ENSANAG00000027052	-	100	99.156	Aotus_nancymaae
ENSPTRG00000043341	RAB23	99	83.898	ENSACLG00000002819	rab23	99	83.898	Astatotilapia_calliptera
ENSPTRG00000043341	RAB23	99	86.864	ENSAMXG00000014960	rab23	99	86.864	Astyanax_mexicanus
ENSPTRG00000043341	RAB23	100	95.359	ENSBTAG00000005362	RAB23	100	95.359	Bos_taurus
ENSPTRG00000043341	RAB23	100	99.156	ENSCJAG00000010247	RAB23	100	99.156	Callithrix_jacchus
ENSPTRG00000043341	RAB23	100	97.468	ENSCAFG00000002459	RAB23	100	97.468	Canis_familiaris
ENSPTRG00000043341	RAB23	100	97.468	ENSCAFG00020015900	RAB23	100	97.468	Canis_lupus_dingo
ENSPTRG00000043341	RAB23	100	95.359	ENSCHIG00000009815	RAB23	100	95.359	Capra_hircus
ENSPTRG00000043341	RAB23	99	98.305	ENSTSYG00000029126	RAB23	99	98.305	Carlito_syrichta
ENSPTRG00000043341	RAB23	100	92.827	ENSCPOG00000030218	RAB23	100	92.827	Cavia_porcellus
ENSPTRG00000043341	RAB23	100	98.734	ENSCCAG00000020364	RAB23	100	98.734	Cebus_capucinus
ENSPTRG00000043341	RAB23	100	99.578	ENSCATG00000027876	RAB23	100	99.578	Cercocebus_atys
ENSPTRG00000043341	RAB23	100	96.203	ENSCLAG00000000797	RAB23	100	96.203	Chinchilla_lanigera
ENSPTRG00000043341	RAB23	100	98.734	ENSCSAG00000013438	RAB23	100	98.734	Chlorocebus_sabaeus
ENSPTRG00000043341	RAB23	100	91.139	ENSCPBG00000022640	RAB23	100	91.139	Chrysemys_picta_bellii
ENSPTRG00000043341	RAB23	99	66.116	ENSCING00000001155	-	99	66.529	Ciona_intestinalis
ENSPTRG00000043341	RAB23	99	64.706	ENSCSAVG00000001356	-	99	66.109	Ciona_savignyi
ENSPTRG00000043341	RAB23	100	98.734	ENSCANG00000031065	RAB23	100	98.734	Colobus_angolensis_palliatus
ENSPTRG00000043341	RAB23	100	94.937	ENSCGRG00001008994	Rab23	100	94.937	Cricetulus_griseus_chok1gshd
ENSPTRG00000043341	RAB23	99	94.068	ENSCGRG00000013630	Rab23	100	94.068	Cricetulus_griseus_crigri
ENSPTRG00000043341	RAB23	99	73.729	ENSCSEG00000010565	rab23	99	73.729	Cynoglossus_semilaevis
ENSPTRG00000043341	RAB23	99	84.322	ENSCVAG00000020501	rab23	99	84.322	Cyprinodon_variegatus
ENSPTRG00000043341	RAB23	99	85.169	ENSDARG00000004151	rab23	99	85.169	Danio_rerio
ENSPTRG00000043341	RAB23	100	94.093	ENSDNOG00000015501	RAB23	100	94.093	Dasypus_novemcinctus
ENSPTRG00000043341	RAB23	99	95.339	ENSDORG00000028344	Rab23	99	95.339	Dipodomys_ordii
ENSPTRG00000043341	RAB23	94	59.565	FBgn0037364	Rab23	82	59.565	Drosophila_melanogaster
ENSPTRG00000043341	RAB23	97	65.517	ENSEBUG00000010861	-	92	65.517	Eptatretus_burgeri
ENSPTRG00000043341	RAB23	100	97.046	ENSEASG00005003529	RAB23	100	97.046	Equus_asinus_asinus
ENSPTRG00000043341	RAB23	100	96.624	ENSECAG00000013427	RAB23	100	96.624	Equus_caballus
ENSPTRG00000043341	RAB23	99	95.339	ENSEEUG00000015045	RAB23	99	95.339	Erinaceus_europaeus
ENSPTRG00000043341	RAB23	99	82.627	ENSELUG00000020788	rab23	99	83.898	Esox_lucius
ENSPTRG00000043341	RAB23	100	98.312	ENSFCAG00000044358	RAB23	100	98.312	Felis_catus
ENSPTRG00000043341	RAB23	100	89.873	ENSFALG00000001708	RAB23	100	89.873	Ficedula_albicollis
ENSPTRG00000043341	RAB23	100	94.515	ENSFDAG00000014834	RAB23	100	94.515	Fukomys_damarensis
ENSPTRG00000043341	RAB23	99	83.051	ENSFHEG00000023069	rab23	99	83.475	Fundulus_heteroclitus
ENSPTRG00000043341	RAB23	99	85.169	ENSGMOG00000005102	rab23	99	85.169	Gadus_morhua
ENSPTRG00000043341	RAB23	100	88.186	ENSGALG00000016279	RAB23	100	88.186	Gallus_gallus
ENSPTRG00000043341	RAB23	100	81.857	ENSGAFG00000007684	rab23	99	82.627	Gambusia_affinis
ENSPTRG00000043341	RAB23	99	83.898	ENSGACG00000006151	rab23	99	83.898	Gasterosteus_aculeatus
ENSPTRG00000043341	RAB23	100	91.561	ENSGAGG00000012709	RAB23	100	91.561	Gopherus_agassizii
ENSPTRG00000043341	RAB23	99	74.153	ENSHBUG00000007966	rab23	99	74.153	Haplochromis_burtoni
ENSPTRG00000043341	RAB23	100	79.668	ENSHGLG00000009371	-	100	79.668	Heterocephalus_glaber_female
ENSPTRG00000043341	RAB23	100	95.359	ENSHGLG00000013030	-	100	95.359	Heterocephalus_glaber_female
ENSPTRG00000043341	RAB23	100	79.668	ENSHGLG00100017177	-	100	79.668	Heterocephalus_glaber_male
ENSPTRG00000043341	RAB23	100	95.359	ENSHGLG00100005945	-	100	95.359	Heterocephalus_glaber_male
ENSPTRG00000043341	RAB23	99	70.763	ENSHCOG00000013919	rab23	99	71.186	Hippocampus_comes
ENSPTRG00000043341	RAB23	99	76.271	ENSIPUG00000016494	rab23	99	76.271	Ictalurus_punctatus
ENSPTRG00000043341	RAB23	100	98.734	ENSSTOG00000010962	RAB23	100	98.734	Ictidomys_tridecemlineatus
ENSPTRG00000043341	RAB23	100	96.203	ENSJJAG00000020094	Rab23	100	96.203	Jaculus_jaculus
ENSPTRG00000043341	RAB23	99	83.475	ENSKMAG00000018270	rab23	99	83.475	Kryptolebias_marmoratus
ENSPTRG00000043341	RAB23	99	83.051	ENSLBEG00000013176	rab23	99	83.051	Labrus_bergylta
ENSPTRG00000043341	RAB23	99	88.983	ENSLACG00000004025	RAB23	99	88.983	Latimeria_chalumnae
ENSPTRG00000043341	RAB23	99	87.448	ENSLOCG00000016999	rab23	99	87.448	Lepisosteus_oculatus
ENSPTRG00000043341	RAB23	100	98.312	ENSLAFG00000007209	RAB23	100	98.312	Loxodonta_africana
ENSPTRG00000043341	RAB23	100	99.578	ENSMFAG00000032369	RAB23	100	99.578	Macaca_fascicularis
ENSPTRG00000043341	RAB23	100	99.578	ENSMMUG00000018003	RAB23	100	99.578	Macaca_mulatta
ENSPTRG00000043341	RAB23	100	99.578	ENSMNEG00000037012	RAB23	100	99.578	Macaca_nemestrina
ENSPTRG00000043341	RAB23	100	99.578	ENSMLEG00000042429	RAB23	100	99.578	Mandrillus_leucophaeus
ENSPTRG00000043341	RAB23	99	85.169	ENSMAMG00000015456	rab23	99	85.169	Mastacembelus_armatus
ENSPTRG00000043341	RAB23	99	83.898	ENSMZEG00005005441	rab23	99	83.898	Maylandia_zebra
ENSPTRG00000043341	RAB23	100	88.186	ENSMGAG00000013882	RAB23	100	88.186	Meleagris_gallopavo
ENSPTRG00000043341	RAB23	100	98.734	ENSMICG00000014037	RAB23	100	98.734	Microcebus_murinus
ENSPTRG00000043341	RAB23	100	94.937	ENSMOCG00000000444	Rab23	100	94.937	Microtus_ochrogaster
ENSPTRG00000043341	RAB23	99	74.153	ENSMMOG00000007703	rab23	99	74.153	Mola_mola
ENSPTRG00000043341	RAB23	100	94.937	ENSMODG00000018720	RAB23	100	94.937	Monodelphis_domestica
ENSPTRG00000043341	RAB23	99	84.322	ENSMALG00000002136	rab23	99	84.322	Monopterus_albus
ENSPTRG00000043341	RAB23	100	94.937	MGP_CAROLIEiJ_G0014015	Rab23	100	94.937	Mus_caroli
ENSPTRG00000043341	RAB23	100	93.671	ENSMUSG00000004768	Rab23	100	93.671	Mus_musculus
ENSPTRG00000043341	RAB23	100	94.093	MGP_PahariEiJ_G0027261	Rab23	100	94.093	Mus_pahari
ENSPTRG00000043341	RAB23	100	94.093	MGP_SPRETEiJ_G0014820	Rab23	100	94.093	Mus_spretus
ENSPTRG00000043341	RAB23	100	86.134	ENSMPUG00000002642	RAB23	100	86.134	Mustela_putorius_furo
ENSPTRG00000043341	RAB23	100	97.046	ENSMLUG00000004058	RAB23	100	97.046	Myotis_lucifugus
ENSPTRG00000043341	RAB23	100	97.468	ENSNGAG00000018038	Rab23	100	97.468	Nannospalax_galili
ENSPTRG00000043341	RAB23	99	83.898	ENSNBRG00000013691	rab23	99	83.898	Neolamprologus_brichardi
ENSPTRG00000043341	RAB23	100	100.000	ENSNLEG00000027830	RAB23	100	100.000	Nomascus_leucogenys
ENSPTRG00000043341	RAB23	100	93.671	ENSODEG00000016056	RAB23	100	93.671	Octodon_degus
ENSPTRG00000043341	RAB23	99	83.122	ENSONIG00000009749	rab23	99	83.122	Oreochromis_niloticus
ENSPTRG00000043341	RAB23	100	94.093	ENSOANG00000001398	RAB23	100	94.093	Ornithorhynchus_anatinus
ENSPTRG00000043341	RAB23	100	97.890	ENSOCUG00000004816	RAB23	100	97.890	Oryctolagus_cuniculus
ENSPTRG00000043341	RAB23	99	82.203	ENSORLG00000010115	rab23	99	82.203	Oryzias_latipes
ENSPTRG00000043341	RAB23	99	82.203	ENSORLG00020020220	rab23	99	82.203	Oryzias_latipes_hni
ENSPTRG00000043341	RAB23	99	81.356	ENSORLG00015004033	rab23	99	81.356	Oryzias_latipes_hsok
ENSPTRG00000043341	RAB23	99	81.780	ENSOMEG00000001706	rab23	99	81.780	Oryzias_melastigma
ENSPTRG00000043341	RAB23	100	97.890	ENSOGAG00000005675	RAB23	100	97.890	Otolemur_garnettii
ENSPTRG00000043341	RAB23	100	95.359	ENSOARG00000005749	RAB23	100	95.359	Ovis_aries
ENSPTRG00000043341	RAB23	100	99.578	ENSPPAG00000010023	RAB23	100	99.578	Pan_paniscus
ENSPTRG00000043341	RAB23	100	97.890	ENSPPRG00000012453	RAB23	100	97.890	Panthera_pardus
ENSPTRG00000043341	RAB23	100	98.312	ENSPTIG00000009435	RAB23	100	98.312	Panthera_tigris_altaica
ENSPTRG00000043341	RAB23	100	99.578	ENSPANG00000017772	RAB23	100	99.578	Papio_anubis
ENSPTRG00000043341	RAB23	81	88.083	ENSPKIG00000024310	rab23	95	88.083	Paramormyrops_kingsleyae
ENSPTRG00000043341	RAB23	100	91.139	ENSPSIG00000015579	RAB23	100	91.139	Pelodiscus_sinensis
ENSPTRG00000043341	RAB23	99	71.610	ENSPMGG00000008577	rab23	99	71.610	Periophthalmus_magnuspinnatus
ENSPTRG00000043341	RAB23	100	94.937	ENSPEMG00000023271	Rab23	100	94.937	Peromyscus_maniculatus_bairdii
ENSPTRG00000043341	RAB23	99	68.220	ENSPMAG00000006835	-	99	68.220	Petromyzon_marinus
ENSPTRG00000043341	RAB23	100	94.937	ENSPCIG00000007267	RAB23	100	94.937	Phascolarctos_cinereus
ENSPTRG00000043341	RAB23	99	82.627	ENSPFOG00000011493	rab23	99	82.627	Poecilia_formosa
ENSPTRG00000043341	RAB23	99	82.203	ENSPLAG00000011697	rab23	99	82.203	Poecilia_latipinna
ENSPTRG00000043341	RAB23	99	82.627	ENSPMEG00000017300	rab23	99	82.627	Poecilia_mexicana
ENSPTRG00000043341	RAB23	99	72.458	ENSPREG00000022509	rab23	99	72.458	Poecilia_reticulata
ENSPTRG00000043341	RAB23	100	100.000	ENSPPYG00000016739	RAB23	100	100.000	Pongo_abelii
ENSPTRG00000043341	RAB23	100	98.312	ENSPCOG00000028471	RAB23	100	98.312	Propithecus_coquereli
ENSPTRG00000043341	RAB23	100	86.498	ENSPVAG00000017693	RAB23	100	86.498	Pteropus_vampyrus
ENSPTRG00000043341	RAB23	99	83.898	ENSPNYG00000019639	rab23	99	83.898	Pundamilia_nyererei
ENSPTRG00000043341	RAB23	99	87.712	ENSPNAG00000024728	rab23	99	87.712	Pygocentrus_nattereri
ENSPTRG00000043341	RAB23	100	94.093	ENSRNOG00000012629	Rab23	100	94.093	Rattus_norvegicus
ENSPTRG00000043341	RAB23	100	94.215	ENSRBIG00000030547	RAB23	100	94.215	Rhinopithecus_bieti
ENSPTRG00000043341	RAB23	100	99.156	ENSRROG00000035920	RAB23	100	99.156	Rhinopithecus_roxellana
ENSPTRG00000043341	RAB23	100	97.890	ENSSBOG00000033237	RAB23	100	97.890	Saimiri_boliviensis_boliviensis
ENSPTRG00000043341	RAB23	100	94.515	ENSSHAG00000006379	RAB23	100	94.515	Sarcophilus_harrisii
ENSPTRG00000043341	RAB23	99	86.017	ENSSFOG00015012604	rab23	99	86.017	Scleropages_formosus
ENSPTRG00000043341	RAB23	99	83.475	ENSSMAG00000006341	rab23	99	83.475	Scophthalmus_maximus
ENSPTRG00000043341	RAB23	99	84.322	ENSSDUG00000023508	rab23	99	84.322	Seriola_dumerili
ENSPTRG00000043341	RAB23	99	84.322	ENSSLDG00000000287	rab23	99	84.322	Seriola_lalandi_dorsalis
ENSPTRG00000043341	RAB23	100	95.781	ENSSARG00000013689	RAB23	100	95.781	Sorex_araneus
ENSPTRG00000043341	RAB23	100	93.249	ENSSPUG00000006274	RAB23	100	93.249	Sphenodon_punctatus
ENSPTRG00000043341	RAB23	99	84.746	ENSSPAG00000010373	rab23	99	84.746	Stegastes_partitus
ENSPTRG00000043341	RAB23	100	94.937	ENSSSCG00000029539	RAB23	100	94.937	Sus_scrofa
ENSPTRG00000043341	RAB23	100	89.873	ENSTGUG00000012794	RAB23	100	89.873	Taeniopygia_guttata
ENSPTRG00000043341	RAB23	99	82.203	ENSTRUG00000015697	rab23	99	82.203	Takifugu_rubripes
ENSPTRG00000043341	RAB23	99	83.898	ENSTNIG00000016575	rab23	99	83.898	Tetraodon_nigroviridis
ENSPTRG00000043341	RAB23	100	97.890	ENSUAMG00000013367	RAB23	100	97.890	Ursus_americanus
ENSPTRG00000043341	RAB23	100	97.890	ENSUMAG00000018629	RAB23	100	97.890	Ursus_maritimus
ENSPTRG00000043341	RAB23	81	67.539	ENSVPAG00000006805	RAB23	100	67.539	Vicugna_pacos
ENSPTRG00000043341	RAB23	100	97.046	ENSVVUG00000008535	RAB23	100	97.046	Vulpes_vulpes
ENSPTRG00000043341	RAB23	99	81.435	ENSXETG00000004449	rab23	99	81.435	Xenopus_tropicalis
ENSPTRG00000043341	RAB23	99	82.203	ENSXCOG00000011864	rab23	99	82.203	Xiphophorus_couchianus
ENSPTRG00000043341	RAB23	99	82.627	ENSXMAG00000009387	rab23	99	82.627	Xiphophorus_maculatus