EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000043416 (Gene tree)
Gene ID: 107971246
Gene Symbol: -
Alias: -
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 37742 bases
Position: chrKV421465.1:109885-147626
Accession: 107971246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000070218	TruB_N	PF01509.18	4.3e-21	1	1
ENSPTRP00000070218	PUA	PF01472.20	8.2e-18	1	1
ENSPTRP00000070218	DKCLD	PF08068.12	7.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000078805	-	2590	XM_016947588	ENSPTRP00000070218	591 (aa)	XP_016803077	A0A2I3S0W4

Gene Model

Click here to download ENSPTRG00000043416's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000043416's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000043416	-	85	100.000	ENSPTRG00000022449	DKC1	98	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000043416	-	85	100.000	ENSG00000130826	DKC1	99	100.000	Homo_sapiens
ENSPTRG00000043416	-	74	81.591	ENSAPOG00000007799	dkc1	91	78.556	Acanthochromis_polyacanthus
ENSPTRG00000043416	-	79	94.206	ENSAMEG00000002776	DKC1	97	92.555	Ailuropoda_melanoleuca
ENSPTRG00000043416	-	74	80.726	ENSACIG00000022614	dkc1	90	81.903	Amphilophus_citrinellus
ENSPTRG00000043416	-	86	74.369	ENSAOCG00000013159	dkc1	92	77.612	Amphiprion_ocellaris
ENSPTRG00000043416	-	79	78.344	ENSAPEG00000002284	dkc1	93	78.373	Amphiprion_percula
ENSPTRG00000043416	-	75	77.778	ENSATEG00000013682	dkc1	81	83.535	Anabas_testudineus
ENSPTRG00000043416	-	88	76.836	ENSACAG00000015600	DKC1	89	76.836	Anolis_carolinensis
ENSPTRG00000043416	-	85	97.822	ENSANAG00000022732	DKC1	98	97.822	Aotus_nancymaae
ENSPTRG00000043416	-	67	86.181	ENSACLG00000015605	dkc1	94	77.273	Astatotilapia_calliptera
ENSPTRG00000043416	-	75	81.448	ENSAMXG00000017108	dkc1	87	79.266	Astyanax_mexicanus
ENSPTRG00000043416	-	84	92.354	ENSBTAG00000013045	DKC1	97	92.555	Bos_taurus
ENSPTRG00000043416	-	70	67.312	WBGene00010478	K01G5.5	98	65.068	Caenorhabditis_elegans
ENSPTRG00000043416	-	85	98.814	ENSCJAG00000004210	DKC1	98	98.814	Callithrix_jacchus
ENSPTRG00000043416	-	84	79.200	ENSCAFG00000009311	-	96	79.000	Canis_familiaris
ENSPTRG00000043416	-	84	90.748	ENSCAFG00000019620	-	97	90.711	Canis_familiaris
ENSPTRG00000043416	-	84	79.032	ENSCAFG00020009379	-	92	78.831	Canis_lupus_dingo
ENSPTRG00000043416	-	84	90.748	ENSCAFG00020008918	-	97	90.711	Canis_lupus_dingo
ENSPTRG00000043416	-	84	91.549	ENSCHIG00000017392	DKC1	97	92.354	Capra_hircus
ENSPTRG00000043416	-	84	94.048	ENSTSYG00000007681	DKC1	99	93.064	Carlito_syrichta
ENSPTRG00000043416	-	74	94.253	ENSCAPG00000003342	DKC1	99	94.253	Cavia_aperea
ENSPTRG00000043416	-	84	94.567	ENSCPOG00000008825	DKC1	99	93.725	Cavia_porcellus
ENSPTRG00000043416	-	85	90.495	ENSCCAG00000027418	DKC1	98	90.495	Cebus_capucinus
ENSPTRG00000043416	-	85	99.208	ENSCATG00000033602	DKC1	98	99.208	Cercocebus_atys
ENSPTRG00000043416	-	83	94.898	ENSCLAG00000000720	DKC1	96	94.898	Chinchilla_lanigera
ENSPTRG00000043416	-	85	99.406	ENSCSAG00000006706	DKC1	98	99.406	Chlorocebus_sabaeus
ENSPTRG00000043416	-	76	83.885	ENSCPBG00000005858	DKC1	89	88.333	Chrysemys_picta_bellii
ENSPTRG00000043416	-	73	74.943	ENSCING00000004599	-	85	73.077	Ciona_intestinalis
ENSPTRG00000043416	-	76	72.391	ENSCSAVG00000010047	-	96	74.596	Ciona_savignyi
ENSPTRG00000043416	-	85	99.406	ENSCANG00000027987	DKC1	98	99.406	Colobus_angolensis_palliatus
ENSPTRG00000043416	-	84	92.354	ENSCGRG00001014574	-	97	92.354	Cricetulus_griseus_chok1gshd
ENSPTRG00000043416	-	83	66.126	ENSCGRG00001016789	-	98	65.112	Cricetulus_griseus_chok1gshd
ENSPTRG00000043416	-	84	92.354	ENSCGRG00000016075	-	97	92.354	Cricetulus_griseus_crigri
ENSPTRG00000043416	-	85	65.675	ENSCGRG00000014809	-	96	64.990	Cricetulus_griseus_crigri
ENSPTRG00000043416	-	80	76.409	ENSCSEG00000012633	dkc1	93	80.455	Cynoglossus_semilaevis
ENSPTRG00000043416	-	74	80.137	ENSCVAG00000010155	dkc1	83	80.365	Cyprinodon_variegatus
ENSPTRG00000043416	-	69	85.185	ENSDARG00000016484	dkc1	94	74.538	Danio_rerio
ENSPTRG00000043416	-	84	92.944	ENSDNOG00000004218	DKC1	99	92.157	Dasypus_novemcinctus
ENSPTRG00000043416	-	51	83.000	ENSDORG00000013566	-	100	83.000	Dipodomys_ordii
ENSPTRG00000043416	-	75	69.615	FBgn0259937	Nop60B	91	66.667	Drosophila_melanogaster
ENSPTRG00000043416	-	79	88.009	ENSETEG00000016095	DKC1	99	87.373	Echinops_telfairi
ENSPTRG00000043416	-	57	77.811	ENSEBUG00000015962	dkc1	99	81.911	Eptatretus_burgeri
ENSPTRG00000043416	-	84	92.308	ENSEASG00005007484	DKC1	97	92.110	Equus_asinus_asinus
ENSPTRG00000043416	-	84	92.308	ENSECAG00000023524	DKC1	97	92.110	Equus_caballus
ENSPTRG00000043416	-	72	90.353	ENSEEUG00000003323	DKC1	99	90.353	Erinaceus_europaeus
ENSPTRG00000043416	-	74	81.264	ENSELUG00000014538	dkc1	90	79.596	Esox_lucius
ENSPTRG00000043416	-	84	92.958	ENSFCAG00000006577	DKC1	97	92.757	Felis_catus
ENSPTRG00000043416	-	74	83.521	ENSFALG00000011496	DKC1	85	82.927	Ficedula_albicollis
ENSPTRG00000043416	-	83	93.293	ENSFDAG00000002516	DKC1	97	93.293	Fukomys_damarensis
ENSPTRG00000043416	-	74	80.272	ENSFHEG00000004627	dkc1	89	78.233	Fundulus_heteroclitus
ENSPTRG00000043416	-	66	83.376	ENSGMOG00000017277	dkc1	100	83.376	Gadus_morhua
ENSPTRG00000043416	-	74	86.468	ENSGALG00000005054	DKC1	85	85.586	Gallus_gallus
ENSPTRG00000043416	-	74	80.455	ENSGAFG00000011486	dkc1	74	80.455	Gambusia_affinis
ENSPTRG00000043416	-	67	86.683	ENSGACG00000004373	dkc1	96	88.754	Gasterosteus_aculeatus
ENSPTRG00000043416	-	76	84.327	ENSGAGG00000011330	DKC1	89	84.946	Gopherus_agassizii
ENSPTRG00000043416	-	85	100.000	ENSGGOG00000001045	DKC1	98	100.000	Gorilla_gorilla
ENSPTRG00000043416	-	82	75.813	ENSHBUG00000012436	dkc1	96	75.813	Haplochromis_burtoni
ENSPTRG00000043416	-	84	93.200	ENSHGLG00000000649	DKC1	97	93.400	Heterocephalus_glaber_female
ENSPTRG00000043416	-	83	93.117	ENSHGLG00100001153	DKC1	97	93.320	Heterocephalus_glaber_male
ENSPTRG00000043416	-	75	79.819	ENSHCOG00000021099	dkc1	86	80.499	Hippocampus_comes
ENSPTRG00000043416	-	78	79.348	ENSIPUG00000010309	dkc1	98	74.219	Ictalurus_punctatus
ENSPTRG00000043416	-	82	95.483	ENSSTOG00000001074	-	100	95.483	Ictidomys_tridecemlineatus
ENSPTRG00000043416	-	84	86.519	ENSSTOG00000020149	-	99	85.490	Ictidomys_tridecemlineatus
ENSPTRG00000043416	-	84	84.569	ENSSTOG00000011904	-	93	84.569	Ictidomys_tridecemlineatus
ENSPTRG00000043416	-	51	84.000	ENSJJAG00000010086	-	100	84.000	Jaculus_jaculus
ENSPTRG00000043416	-	75	78.781	ENSKMAG00000008010	dkc1	93	75.840	Kryptolebias_marmoratus
ENSPTRG00000043416	-	74	80.638	ENSLBEG00000019122	dkc1	92	78.879	Labrus_bergylta
ENSPTRG00000043416	-	76	81.960	ENSLACG00000014025	DKC1	91	88.693	Latimeria_chalumnae
ENSPTRG00000043416	-	75	82.774	ENSLOCG00000013713	dkc1	88	84.174	Lepisosteus_oculatus
ENSPTRG00000043416	-	84	91.751	ENSLAFG00000000221	DKC1	97	91.751	Loxodonta_africana
ENSPTRG00000043416	-	99	97.607	ENSMFAG00000032398	DKC1	98	97.607	Macaca_fascicularis
ENSPTRG00000043416	-	85	99.406	ENSMMUG00000005768	DKC1	98	99.406	Macaca_mulatta
ENSPTRG00000043416	-	85	99.406	ENSMNEG00000034503	DKC1	98	99.406	Macaca_nemestrina
ENSPTRG00000043416	-	85	99.406	ENSMLEG00000034422	DKC1	98	99.406	Mandrillus_leucophaeus
ENSPTRG00000043416	-	69	85.468	ENSMAMG00000005427	dkc1	90	86.070	Mastacembelus_armatus
ENSPTRG00000043416	-	82	76.016	ENSMZEG00005014503	dkc1	96	76.016	Maylandia_zebra
ENSPTRG00000043416	-	67	86.683	ENSMGAG00000009238	DKC1	87	85.504	Meleagris_gallopavo
ENSPTRG00000043416	-	51	83.667	ENSMAUG00000016454	-	100	83.667	Mesocricetus_auratus
ENSPTRG00000043416	-	84	93.014	ENSMICG00000038751	-	97	93.014	Microcebus_murinus
ENSPTRG00000043416	-	74	85.488	ENSMICG00000002818	-	99	83.791	Microcebus_murinus
ENSPTRG00000043416	-	51	80.667	ENSMOCG00000001169	-	100	80.667	Microtus_ochrogaster
ENSPTRG00000043416	-	67	85.930	ENSMMOG00000020348	dkc1	87	85.930	Mola_mola
ENSPTRG00000043416	-	77	85.903	ENSMODG00000009243	DKC1	78	85.903	Monodelphis_domestica
ENSPTRG00000043416	-	75	80.317	ENSMALG00000009454	dkc1	86	79.775	Monopterus_albus
ENSPTRG00000043416	-	84	80.396	MGP_CAROLIEiJ_G0033191	Dkc1	100	92.568	Mus_caroli
ENSPTRG00000043416	-	84	90.946	ENSMUSG00000031403	Dkc1	97	91.147	Mus_musculus
ENSPTRG00000043416	-	84	90.543	MGP_PahariEiJ_G0031735	Dkc1	97	90.543	Mus_pahari
ENSPTRG00000043416	-	84	90.744	MGP_SPRETEiJ_G0034351	Dkc1	97	91.751	Mus_spretus
ENSPTRG00000043416	-	84	89.349	ENSMPUG00000016136	DKC1	93	90.730	Mustela_putorius_furo
ENSPTRG00000043416	-	78	87.636	ENSMLUG00000011918	DKC1	97	84.158	Myotis_lucifugus
ENSPTRG00000043416	-	51	83.667	ENSNGAG00000015724	-	100	83.667	Nannospalax_galili
ENSPTRG00000043416	-	67	87.121	ENSNBRG00000005638	dkc1	80	86.683	Neolamprologus_brichardi
ENSPTRG00000043416	-	85	99.604	ENSNLEG00000014323	DKC1	98	99.604	Nomascus_leucogenys
ENSPTRG00000043416	-	74	83.864	ENSMEUG00000001066	DKC1	96	81.900	Notamacropus_eugenii
ENSPTRG00000043416	-	83	75.813	ENSOPRG00000005248	DKC1	97	75.610	Ochotona_princeps
ENSPTRG00000043416	-	51	85.000	ENSODEG00000000549	-	100	85.000	Octodon_degus
ENSPTRG00000043416	-	74	95.872	ENSODEG00000011816	-	91	93.978	Octodon_degus
ENSPTRG00000043416	-	75	82.127	ENSONIG00000013889	dkc1	86	82.127	Oreochromis_niloticus
ENSPTRG00000043416	-	78	87.420	ENSOANG00000008713	-	96	87.420	Ornithorhynchus_anatinus
ENSPTRG00000043416	-	55	64.223	ENSOANG00000022295	-	95	64.223	Ornithorhynchus_anatinus
ENSPTRG00000043416	-	84	93.964	ENSOCUG00000012646	DKC1	96	93.763	Oryctolagus_cuniculus
ENSPTRG00000043416	-	79	76.609	ENSORLG00000018748	dkc1	89	78.097	Oryzias_latipes
ENSPTRG00000043416	-	68	84.615	ENSOMEG00000005786	dkc1	82	85.356	Oryzias_melastigma
ENSPTRG00000043416	-	84	92.308	ENSOGAG00000003399	DKC1	97	92.110	Otolemur_garnettii
ENSPTRG00000043416	-	84	90.543	ENSOARG00000003047	DKC1	97	91.348	Ovis_aries
ENSPTRG00000043416	-	85	99.604	ENSPPAG00000023820	DKC1	98	99.604	Pan_paniscus
ENSPTRG00000043416	-	79	94.635	ENSPPRG00000009104	DKC1	97	92.757	Panthera_pardus
ENSPTRG00000043416	-	78	91.540	ENSPTIG00000017469	DKC1	96	89.837	Panthera_tigris_altaica
ENSPTRG00000043416	-	85	99.406	ENSPANG00000011978	DKC1	98	99.406	Papio_anubis
ENSPTRG00000043416	-	81	77.917	ENSPKIG00000008443	dkc1	91	81.050	Paramormyrops_kingsleyae
ENSPTRG00000043416	-	62	90.054	ENSPSIG00000013765	DKC1	86	92.737	Pelodiscus_sinensis
ENSPTRG00000043416	-	74	75.615	ENSPMGG00000004097	dkc1	82	75.278	Periophthalmus_magnuspinnatus
ENSPTRG00000043416	-	70	95.897	ENSPEMG00000013348	Dkc1	96	95.897	Peromyscus_maniculatus_bairdii
ENSPTRG00000043416	-	76	87.751	ENSPCIG00000016706	DKC1	77	86.364	Phascolarctos_cinereus
ENSPTRG00000043416	-	74	80.952	ENSPFOG00000018653	dkc1	86	80.952	Poecilia_formosa
ENSPTRG00000043416	-	80	74.494	ENSPLAG00000003272	dkc1	77	80.952	Poecilia_latipinna
ENSPTRG00000043416	-	74	80.952	ENSPMEG00000010413	dkc1	86	80.952	Poecilia_mexicana
ENSPTRG00000043416	-	74	80.952	ENSPREG00000004100	dkc1	84	80.272	Poecilia_reticulata
ENSPTRG00000043416	-	85	99.800	ENSPPYG00000020892	DKC1	98	99.800	Pongo_abelii
ENSPTRG00000043416	-	63	94.370	ENSPCAG00000015034	DKC1	73	94.370	Procavia_capensis
ENSPTRG00000043416	-	84	95.363	ENSPCOG00000026874	DKC1	96	95.363	Propithecus_coquereli
ENSPTRG00000043416	-	84	90.543	ENSPVAG00000009222	DKC1	97	90.342	Pteropus_vampyrus
ENSPTRG00000043416	-	74	80.000	ENSPNYG00000020063	dkc1	88	79.642	Pundamilia_nyererei
ENSPTRG00000043416	-	85	73.684	ENSPNAG00000005780	dkc1	97	76.163	Pygocentrus_nattereri
ENSPTRG00000043416	-	84	82.258	ENSRNOG00000055562	Dkc1	97	82.294	Rattus_norvegicus
ENSPTRG00000043416	-	99	97.607	ENSRBIG00000028457	DKC1	98	97.607	Rhinopithecus_bieti
ENSPTRG00000043416	-	85	99.406	ENSRROG00000044780	DKC1	98	99.406	Rhinopithecus_roxellana
ENSPTRG00000043416	-	65	71.615	YLR175W	-	88	66.509	Saccharomyces_cerevisiae
ENSPTRG00000043416	-	86	98.039	ENSSBOG00000033746	DKC1	99	98.039	Saimiri_boliviensis_boliviensis
ENSPTRG00000043416	-	77	87.061	ENSSHAG00000002463	DKC1	97	86.207	Sarcophilus_harrisii
ENSPTRG00000043416	-	78	79.957	ENSSFOG00015009585	dkc1	89	79.957	Scleropages_formosus
ENSPTRG00000043416	-	75	80.769	ENSSMAG00000002552	dkc1	88	80.778	Scophthalmus_maximus
ENSPTRG00000043416	-	81	77.618	ENSSDUG00000009963	dkc1	96	76.923	Seriola_dumerili
ENSPTRG00000043416	-	80	77.167	ENSSLDG00000019342	dkc1	92	80.813	Seriola_lalandi_dorsalis
ENSPTRG00000043416	-	83	83.197	ENSSARG00000001822	DKC1	96	83.607	Sorex_araneus
ENSPTRG00000043416	-	73	86.270	ENSSPUG00000018907	DKC1	86	84.615	Sphenodon_punctatus
ENSPTRG00000043416	-	79	77.167	ENSSPAG00000002585	dkc1	88	76.582	Stegastes_partitus
ENSPTRG00000043416	-	84	90.748	ENSSSCG00000012823	DKC1	97	91.535	Sus_scrofa
ENSPTRG00000043416	-	68	85.750	ENSTGUG00000006781	DKC1	89	85.250	Taeniopygia_guttata
ENSPTRG00000043416	-	74	80.952	ENSTRUG00000004413	dkc1	86	80.952	Takifugu_rubripes
ENSPTRG00000043416	-	75	65.324	ENSTNIG00000002582	dkc1	87	65.324	Tetraodon_nigroviridis
ENSPTRG00000043416	-	59	93.372	ENSTBEG00000011262	DKC1	95	93.084	Tupaia_belangeri
ENSPTRG00000043416	-	65	91.803	ENSTTRG00000008089	DKC1	74	91.803	Tursiops_truncatus
ENSPTRG00000043416	-	82	92.555	ENSUAMG00000022721	DKC1	95	94.678	Ursus_americanus
ENSPTRG00000043416	-	82	92.153	ENSUMAG00000016899	DKC1	92	98.413	Ursus_maritimus
ENSPTRG00000043416	-	84	73.896	ENSVVUG00000021671	-	91	74.498	Vulpes_vulpes
ENSPTRG00000043416	-	84	88.760	ENSVVUG00000020734	-	88	88.521	Vulpes_vulpes
ENSPTRG00000043416	-	78	80.043	ENSXETG00000032517	DKC1	85	82.727	Xenopus_tropicalis
ENSPTRG00000043416	-	74	79.638	ENSXCOG00000005498	dkc1	92	79.638	Xiphophorus_couchianus
ENSPTRG00000043416	-	74	80.499	ENSXMAG00000004919	dkc1	86	80.499	Xiphophorus_maculatus