EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000043439 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 1563 bases
Position: chr10:22428831-22430393
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000092481	RRM_1	PF00076.22	6.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000089470	-	1227	-	ENSPTRP00000092481	408 (aa)	-	A0A2I3TTC2

Gene Model

Click here to download ENSPTRG00000043439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000043439's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000043439	-	84	36.842	ENSPTRG00000051084	-	77	32.944
ENSPTRG00000043439	-	59	59.155	ENSPTRG00000018393	SYNCRIP	100	53.878
ENSPTRG00000043439	-	52	37.891	ENSPTRG00000016006	RBM47	66	38.168
ENSPTRG00000043439	-	52	39.453	ENSPTRG00000016538	RBM46	54	39.453
ENSPTRG00000043439	-	99	61.336	ENSPTRG00000000324	HNRNPR	83	64.777

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000043439	-	88	60.403	ENSCHIG00000025862	-	78	44.398	Capra_hircus
ENSPTRG00000043439	-	60	36.391	FBgn0038826	Syp	62	36.391	Drosophila_melanogaster
ENSPTRG00000043439	-	75	80.328	ENSGMOG00000002822	-	65	67.901	Gadus_morhua
ENSPTRG00000043439	-	99	90.488	ENSGGOG00000036671	-	97	92.457	Gorilla_gorilla
ENSPTRG00000043439	-	99	50.731	ENSODEG00000005445	-	90	47.908	Octodon_degus
ENSPTRG00000043439	-	99	52.632	ENSODEG00000004900	-	86	55.081	Octodon_degus
ENSPTRG00000043439	-	99	54.175	ENSPCOG00000014665	-	81	57.637	Propithecus_coquereli
ENSPTRG00000043439	-	82	52.332	ENSTGUG00000012478	-	77	53.264	Taeniopygia_guttata
ENSPTRG00000043439	-	99	56.636	ENSTBEG00000002251	-	84	59.813	Tupaia_belangeri
ENSPTRG00000043439	-	83	71.429	ENSTTRG00000007752	-	84	53.532	Tursiops_truncatus
ENSPTRG00000043439	-	75	94.231	ENSVPAG00000006411	-	61	94.231	Vicugna_pacos