EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000043609 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 2878 bases
Position: chr18:46753722-46756599
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000064349	SRP72	PF08492.12	2.3e-16	1	1
ENSPTRP00000074150	SRP72	PF08492.12	6.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000082384	-	1638	-	ENSPTRP00000064349	545 (aa)	-	A0A2I3RI92
ENSPTRT00000088810	-	558	-	ENSPTRP00000074150	185 (aa)	-	A0A2I3SAT2

Gene Model

Click here to download ENSPTRG00000043609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000043609's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000043609	-	94	60.357	ENSPTRG00000048100	-	76	61.822
ENSPTRG00000043609	-	95	75.543	ENSPTRG00000048466	-	82	78.804

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000043609	-	92	76.079	ENSG00000174780	SRP72	80	77.612	Homo_sapiens
ENSPTRG00000043609	-	92	55.450	ENSAPOG00000019438	srp72	78	52.919	Acanthochromis_polyacanthus
ENSPTRG00000043609	-	91	76.199	ENSAMEG00000008469	SRP72	80	77.239	Ailuropoda_melanoleuca
ENSPTRG00000043609	-	96	58.885	ENSACIG00000000488	srp72	80	60.967	Amphilophus_citrinellus
ENSPTRG00000043609	-	91	61.993	ENSAOCG00000011256	srp72	80	62.313	Amphiprion_ocellaris
ENSPTRG00000043609	-	96	60.204	ENSAPEG00000001512	srp72	80	61.940	Amphiprion_percula
ENSPTRG00000043609	-	89	61.682	ENSATEG00000006781	srp72	86	61.582	Anabas_testudineus
ENSPTRG00000043609	-	91	67.219	ENSAPLG00000008751	SRP72	80	68.715	Anas_platyrhynchos
ENSPTRG00000043609	-	92	67.329	ENSACAG00000002381	SRP72	79	69.403	Anolis_carolinensis
ENSPTRG00000043609	-	95	76.243	ENSANAG00000020836	-	81	79.558	Aotus_nancymaae
ENSPTRG00000043609	-	96	59.965	ENSACLG00000014617	srp72	80	62.127	Astatotilapia_calliptera
ENSPTRG00000043609	-	95	59.436	ENSAMXG00000004011	srp72	81	61.754	Astyanax_mexicanus
ENSPTRG00000043609	-	91	75.092	ENSBTAG00000010593	SRP72	80	76.119	Bos_taurus
ENSPTRG00000043609	-	95	75.000	ENSCJAG00000017998	SRP72	82	78.261	Callithrix_jacchus
ENSPTRG00000043609	-	91	76.384	ENSCAFG00000002244	SRP72	80	77.425	Canis_familiaris
ENSPTRG00000043609	-	91	76.384	ENSCAFG00020027338	SRP72	90	77.715	Canis_lupus_dingo
ENSPTRG00000043609	-	91	74.307	ENSCHIG00000021465	SRP72	80	75.140	Capra_hircus
ENSPTRG00000043609	-	95	76.630	ENSTSYG00000010571	-	82	79.891	Carlito_syrichta
ENSPTRG00000043609	-	95	75.543	ENSCAPG00000016668	SRP72	82	78.804	Cavia_aperea
ENSPTRG00000043609	-	92	75.899	ENSCPOG00000000218	SRP72	80	77.612	Cavia_porcellus
ENSPTRG00000043609	-	95	75.543	ENSCCAG00000030683	-	82	78.804	Cebus_capucinus
ENSPTRG00000043609	-	57	73.451	ENSCCAG00000031330	-	93	66.393	Cebus_capucinus
ENSPTRG00000043609	-	94	73.063	ENSCCAG00000030830	-	80	75.985	Cebus_capucinus
ENSPTRG00000043609	-	96	74.087	ENSCATG00000008072	SRP72	82	77.612	Cercocebus_atys
ENSPTRG00000043609	-	92	69.669	ENSCATG00000045359	-	79	71.906	Cercocebus_atys
ENSPTRG00000043609	-	91	76.015	ENSCLAG00000003571	SRP72	80	77.052	Chinchilla_lanigera
ENSPTRG00000043609	-	92	71.480	ENSCSAG00000005079	SRP72	80	73.408	Chlorocebus_sabaeus
ENSPTRG00000043609	-	95	65.278	ENSCHOG00000013240	SRP72	69	83.333	Choloepus_hoffmanni
ENSPTRG00000043609	-	91	67.897	ENSCPBG00000015015	SRP72	80	68.843	Chrysemys_picta_bellii
ENSPTRG00000043609	-	84	33.523	ENSCING00000002417	-	80	33.094	Ciona_intestinalis
ENSPTRG00000043609	-	91	32.860	ENSCSAVG00000011288	-	88	33.223	Ciona_savignyi
ENSPTRG00000043609	-	92	76.079	ENSCANG00000041709	SRP72	82	77.612	Colobus_angolensis_palliatus
ENSPTRG00000043609	-	93	59.158	ENSCANG00000037920	-	76	60.314	Colobus_angolensis_palliatus
ENSPTRG00000043609	-	91	75.277	ENSCGRG00001013548	Srp72	80	76.306	Cricetulus_griseus_chok1gshd
ENSPTRG00000043609	-	91	75.277	ENSCGRG00000003013	Srp72	84	76.306	Cricetulus_griseus_crigri
ENSPTRG00000043609	-	96	58.997	ENSCSEG00000003616	srp72	82	61.567	Cynoglossus_semilaevis
ENSPTRG00000043609	-	88	61.698	ENSCVAG00000001520	srp72	86	61.977	Cyprinodon_variegatus
ENSPTRG00000043609	-	94	59.187	ENSDARG00000014139	srp72	90	61.007	Danio_rerio
ENSPTRG00000043609	-	92	69.534	ENSDNOG00000039012	SRP72	66	70.818	Dasypus_novemcinctus
ENSPTRG00000043609	-	92	75.000	ENSDORG00000000171	Srp72	80	76.493	Dipodomys_ordii
ENSPTRG00000043609	-	94	32.918	FBgn0038810	Srp72	82	32.961	Drosophila_melanogaster
ENSPTRG00000043609	-	92	73.921	ENSETEG00000005191	SRP72	80	75.560	Echinops_telfairi
ENSPTRG00000043609	-	95	42.534	ENSEBUG00000003696	srp72	89	50.673	Eptatretus_burgeri
ENSPTRG00000043609	-	92	75.719	ENSEASG00005017747	SRP72	80	77.239	Equus_asinus_asinus
ENSPTRG00000043609	-	92	75.719	ENSECAG00000006920	SRP72	80	77.239	Equus_caballus
ENSPTRG00000043609	-	96	58.232	ENSELUG00000022415	srp72	87	62.656	Esox_lucius
ENSPTRG00000043609	-	91	76.015	ENSFCAG00000027600	SRP72	80	77.052	Felis_catus
ENSPTRG00000043609	-	93	66.783	ENSFALG00000006713	SRP72	80	69.646	Ficedula_albicollis
ENSPTRG00000043609	-	90	72.781	ENSFDAG00000012897	-	83	72.781	Fukomys_damarensis
ENSPTRG00000043609	-	92	75.719	ENSFDAG00000002014	-	80	77.239	Fukomys_damarensis
ENSPTRG00000043609	-	91	53.143	ENSFDAG00000009793	-	78	54.382	Fukomys_damarensis
ENSPTRG00000043609	-	91	61.993	ENSFHEG00000017652	srp72	74	62.127	Fundulus_heteroclitus
ENSPTRG00000043609	-	91	57.459	ENSGMOG00000005986	srp72	80	57.542	Gadus_morhua
ENSPTRG00000043609	-	91	68.635	ENSGALG00000011403	SRP72	80	69.590	Gallus_gallus
ENSPTRG00000043609	-	95	59.965	ENSGAFG00000017762	srp72	80	62.127	Gambusia_affinis
ENSPTRG00000043609	-	91	61.142	ENSGACG00000016749	srp72	80	61.825	Gasterosteus_aculeatus
ENSPTRG00000043609	-	95	67.539	ENSGAGG00000024611	SRP72	89	68.843	Gopherus_agassizii
ENSPTRG00000043609	-	95	75.543	ENSGGOG00000013234	-	82	78.804	Gorilla_gorilla
ENSPTRG00000043609	-	96	59.790	ENSHBUG00000020723	srp72	80	61.940	Haplochromis_burtoni
ENSPTRG00000043609	-	92	75.540	ENSHGLG00000009791	SRP72	80	77.052	Heterocephalus_glaber_female
ENSPTRG00000043609	-	94	48.804	ENSHGLG00000003496	-	82	64.948	Heterocephalus_glaber_female
ENSPTRG00000043609	-	95	58.216	ENSHGLG00000003950	-	76	65.035	Heterocephalus_glaber_female
ENSPTRG00000043609	-	92	72.973	ENSHGLG00000005029	-	80	73.134	Heterocephalus_glaber_female
ENSPTRG00000043609	-	95	76.111	ENSHGLG00000010633	-	85	76.536	Heterocephalus_glaber_female
ENSPTRG00000043609	-	92	62.799	ENSHGLG00000018597	-	80	62.715	Heterocephalus_glaber_female
ENSPTRG00000043609	-	92	72.973	ENSHGLG00100011236	-	80	73.134	Heterocephalus_glaber_male
ENSPTRG00000043609	-	92	75.540	ENSHGLG00100009021	SRP72	80	77.052	Heterocephalus_glaber_male
ENSPTRG00000043609	-	95	58.216	ENSHGLG00100017133	-	76	65.035	Heterocephalus_glaber_male
ENSPTRG00000043609	-	89	58.269	ENSHGLG00100009346	-	77	60.735	Heterocephalus_glaber_male
ENSPTRG00000043609	-	64	76.984	ENSHGLG00100006071	-	99	69.919	Heterocephalus_glaber_male
ENSPTRG00000043609	-	94	60.746	ENSHCOG00000013760	srp72	81	61.754	Hippocampus_comes
ENSPTRG00000043609	-	95	58.201	ENSIPUG00000000210	srp72	81	60.448	Ictalurus_punctatus
ENSPTRG00000043609	-	92	75.899	ENSSTOG00000007305	SRP72	80	77.425	Ictidomys_tridecemlineatus
ENSPTRG00000043609	-	92	74.820	ENSJJAG00000018324	Srp72	80	76.493	Jaculus_jaculus
ENSPTRG00000043609	-	96	59.408	ENSKMAG00000003776	srp72	80	61.007	Kryptolebias_marmoratus
ENSPTRG00000043609	-	96	58.596	ENSLOCG00000002628	srp72	80	61.381	Lepisosteus_oculatus
ENSPTRG00000043609	-	92	75.180	ENSLAFG00000018307	SRP72	80	76.679	Loxodonta_africana
ENSPTRG00000043609	-	96	74.087	ENSMFAG00000031065	SRP72	82	77.612	Macaca_fascicularis
ENSPTRG00000043609	-	91	71.186	ENSMFAG00000037164	-	82	71.845	Macaca_fascicularis
ENSPTRG00000043609	-	95	61.429	ENSMMUG00000021262	-	79	70.213	Macaca_mulatta
ENSPTRG00000043609	-	94	74.826	ENSMMUG00000016368	SRP72	80	77.612	Macaca_mulatta
ENSPTRG00000043609	-	94	75.000	ENSMNEG00000038065	-	80	77.612	Macaca_nemestrina
ENSPTRG00000043609	-	94	74.603	ENSMLEG00000030140	-	79	76.360	Mandrillus_leucophaeus
ENSPTRG00000043609	-	96	58.916	ENSMAMG00000014989	srp72	71	60.894	Mastacembelus_armatus
ENSPTRG00000043609	-	96	59.965	ENSMZEG00005003325	srp72	80	62.127	Maylandia_zebra
ENSPTRG00000043609	-	91	64.945	ENSMGAG00000008567	SRP72	89	72.115	Meleagris_gallopavo
ENSPTRG00000043609	-	91	75.830	ENSMAUG00000001237	Srp72	80	76.866	Mesocricetus_auratus
ENSPTRG00000043609	-	95	75.843	ENSMICG00000008507	-	81	79.213	Microcebus_murinus
ENSPTRG00000043609	-	91	75.092	ENSMOCG00000020309	Srp72	80	76.119	Microtus_ochrogaster
ENSPTRG00000043609	-	91	60.701	ENSMMOG00000002627	srp72	80	60.821	Mola_mola
ENSPTRG00000043609	-	91	67.712	ENSMODG00000020697	SRP72	80	68.657	Monodelphis_domestica
ENSPTRG00000043609	-	96	59.441	ENSMALG00000003747	srp72	89	61.567	Monopterus_albus
ENSPTRG00000043609	-	91	74.354	MGP_CAROLIEiJ_G0027323	Srp72	80	75.373	Mus_caroli
ENSPTRG00000043609	-	91	74.354	ENSMUSG00000036323	Srp72	80	75.373	Mus_musculus
ENSPTRG00000043609	-	91	74.908	MGP_PahariEiJ_G0017103	Srp72	80	75.933	Mus_pahari
ENSPTRG00000043609	-	91	74.354	MGP_SPRETEiJ_G0028317	Srp72	80	75.373	Mus_spretus
ENSPTRG00000043609	-	91	76.199	ENSMPUG00000004828	SRP72	80	77.239	Mustela_putorius_furo
ENSPTRG00000043609	-	91	75.691	ENSMLUG00000007344	SRP72	80	76.723	Myotis_lucifugus
ENSPTRG00000043609	-	92	74.460	ENSNGAG00000012595	Srp72	80	76.119	Nannospalax_galili
ENSPTRG00000043609	-	96	56.591	ENSNBRG00000014492	srp72	80	58.537	Neolamprologus_brichardi
ENSPTRG00000043609	-	95	76.087	ENSNLEG00000008806	-	82	79.348	Nomascus_leucogenys
ENSPTRG00000043609	-	76	85.366	ENSMEUG00000005164	SRP72	70	81.356	Notamacropus_eugenii
ENSPTRG00000043609	-	92	73.381	ENSOPRG00000012521	SRP72	80	75.187	Ochotona_princeps
ENSPTRG00000043609	-	91	75.646	ENSODEG00000012214	SRP72	81	76.679	Octodon_degus
ENSPTRG00000043609	-	96	59.965	ENSONIG00000001446	srp72	80	62.127	Oreochromis_niloticus
ENSPTRG00000043609	-	95	52.456	ENSOANG00000008562	SRP72	80	55.515	Ornithorhynchus_anatinus
ENSPTRG00000043609	-	91	75.830	ENSOCUG00000012226	SRP72	80	76.866	Oryctolagus_cuniculus
ENSPTRG00000043609	-	95	57.544	ENSORLG00000020418	srp72	80	59.701	Oryzias_latipes
ENSPTRG00000043609	-	95	57.193	ENSORLG00020009138	srp72	79	58.724	Oryzias_latipes_hni
ENSPTRG00000043609	-	95	57.018	ENSORLG00015018251	srp72	80	59.142	Oryzias_latipes_hsok
ENSPTRG00000043609	-	91	58.745	ENSOMEG00000022008	srp72	80	59.615	Oryzias_melastigma
ENSPTRG00000043609	-	91	75.830	ENSOGAG00000003578	SRP72	80	76.866	Otolemur_garnettii
ENSPTRG00000043609	-	91	75.461	ENSOARG00000004329	SRP72	80	76.493	Ovis_aries
ENSPTRG00000043609	-	100	97.431	ENSPPAG00000032490	-	100	97.431	Pan_paniscus
ENSPTRG00000043609	-	94	58.664	ENSPPAG00000011428	-	75	60.000	Pan_paniscus
ENSPTRG00000043609	-	95	75.543	ENSPPAG00000042265	SRP72	82	78.804	Pan_paniscus
ENSPTRG00000043609	-	91	76.015	ENSPPRG00000015991	SRP72	80	77.052	Panthera_pardus
ENSPTRG00000043609	-	91	76.015	ENSPTIG00000018786	SRP72	80	77.052	Panthera_tigris_altaica
ENSPTRG00000043609	-	96	74.087	ENSPANG00000005495	SRP72	82	77.612	Papio_anubis
ENSPTRG00000043609	-	93	68.364	ENSPANG00000030230	-	84	70.097	Papio_anubis
ENSPTRG00000043609	-	92	67.864	ENSPSIG00000003003	SRP72	83	69.963	Pelodiscus_sinensis
ENSPTRG00000043609	-	91	74.723	ENSPEMG00000012828	-	80	75.746	Peromyscus_maniculatus_bairdii
ENSPTRG00000043609	-	95	50.000	ENSPMAG00000008885	-	83	50.000	Petromyzon_marinus
ENSPTRG00000043609	-	91	71.033	ENSPCIG00000000732	SRP72	79	72.015	Phascolarctos_cinereus
ENSPTRG00000043609	-	95	60.315	ENSPFOG00000003480	srp72	80	62.500	Poecilia_formosa
ENSPTRG00000043609	-	93	61.331	ENSPLAG00000020122	srp72	80	62.500	Poecilia_latipinna
ENSPTRG00000043609	-	95	60.140	ENSPMEG00000019988	srp72	91	61.143	Poecilia_mexicana
ENSPTRG00000043609	-	95	59.965	ENSPREG00000006218	srp72	80	61.940	Poecilia_reticulata
ENSPTRG00000043609	-	92	76.259	ENSPPYG00000014752	-	62	77.799	Pongo_abelii
ENSPTRG00000043609	-	94	74.419	ENSPPYG00000009152	-	87	89.489	Pongo_abelii
ENSPTRG00000043609	-	91	72.998	ENSPVAG00000005590	SRP72	80	74.627	Pteropus_vampyrus
ENSPTRG00000043609	-	96	59.965	ENSPNYG00000001916	srp72	80	62.127	Pundamilia_nyererei
ENSPTRG00000043609	-	95	58.730	ENSPNAG00000022424	srp72	81	61.007	Pygocentrus_nattereri
ENSPTRG00000043609	-	95	75.956	ENSRNOG00000002100	LOC108348180	82	79.235	Rattus_norvegicus
ENSPTRG00000043609	-	96	73.868	ENSRBIG00000042069	SRP72	82	77.009	Rhinopithecus_bieti
ENSPTRG00000043609	-	93	67.216	ENSRBIG00000029328	-	85	68.803	Rhinopithecus_bieti
ENSPTRG00000043609	-	96	74.087	ENSRROG00000035704	SRP72	82	77.612	Rhinopithecus_roxellana
ENSPTRG00000043609	-	74	62.428	ENSRROG00000042114	-	93	71.660	Rhinopithecus_roxellana
ENSPTRG00000043609	-	91	71.218	ENSSHAG00000000614	SRP72	80	72.201	Sarcophilus_harrisii
ENSPTRG00000043609	-	95	59.788	ENSSFOG00015002026	srp72	81	62.500	Scleropages_formosus
ENSPTRG00000043609	-	91	59.594	ENSSMAG00000007639	srp72	80	59.888	Scophthalmus_maximus
ENSPTRG00000043609	-	91	61.993	ENSSDUG00000007345	srp72	79	62.127	Seriola_dumerili
ENSPTRG00000043609	-	91	61.808	ENSSLDG00000021819	srp72	80	61.567	Seriola_lalandi_dorsalis
ENSPTRG00000043609	-	95	65.438	ENSSARG00000005804	SRP72	56	80.000	Sorex_araneus
ENSPTRG00000043609	-	94	66.903	ENSSPUG00000009740	SRP72	80	69.590	Sphenodon_punctatus
ENSPTRG00000043609	-	91	61.808	ENSSPAG00000011565	srp72	80	62.127	Stegastes_partitus
ENSPTRG00000043609	-	96	72.426	ENSSSCG00000008900	SRP72	79	76.200	Sus_scrofa
ENSPTRG00000043609	-	93	66.841	ENSTGUG00000004767	SRP72	80	69.703	Taeniopygia_guttata
ENSPTRG00000043609	-	96	57.719	ENSTRUG00000009831	srp72	80	60.075	Takifugu_rubripes
ENSPTRG00000043609	-	93	60.360	ENSTNIG00000013073	srp72	80	61.381	Tetraodon_nigroviridis
ENSPTRG00000043609	-	91	75.092	ENSTTRG00000010945	SRP72	85	76.119	Tursiops_truncatus
ENSPTRG00000043609	-	94	65.581	ENSUAMG00000001701	SRP72	88	78.510	Ursus_americanus
ENSPTRG00000043609	-	91	75.830	ENSUMAG00000008151	SRP72	80	76.866	Ursus_maritimus
ENSPTRG00000043609	-	91	73.665	ENSVPAG00000000458	SRP72	80	74.813	Vicugna_pacos
ENSPTRG00000043609	-	91	76.199	ENSVVUG00000006020	SRP72	80	77.239	Vulpes_vulpes
ENSPTRG00000043609	-	91	63.704	ENSXETG00000010205	srp72	84	64.045	Xenopus_tropicalis
ENSPTRG00000043609	-	95	62.431	ENSXCOG00000015488	srp72	82	64.088	Xiphophorus_couchianus
ENSPTRG00000043609	-	95	59.615	ENSXMAG00000018000	srp72	80	61.567	Xiphophorus_maculatus