EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000043849 (Gene tree)
Gene ID: 740302
Gene Symbol: ZIC3
Alias: -
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 13878 bases
Position: chrX:137425703-137439580
Accession: 740302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000066439	zf-C2H2	PF00096.26	3.1e-21	1	4
ENSPTRP00000066439	zf-C2H2	PF00096.26	3.1e-21	2	4
ENSPTRP00000066439	zf-C2H2	PF00096.26	3.1e-21	3	4
ENSPTRP00000066439	zf-C2H2	PF00096.26	3.1e-21	4	4
ENSPTRP00000085592	zf-C2H2	PF00096.26	3.1e-21	1	4
ENSPTRP00000085592	zf-C2H2	PF00096.26	3.1e-21	2	4
ENSPTRP00000085592	zf-C2H2	PF00096.26	3.1e-21	3	4
ENSPTRP00000085592	zf-C2H2	PF00096.26	3.1e-21	4	4
ENSPTRP00000085130	zf-C2H2	PF00096.26	1.9e-20	1	4
ENSPTRP00000085130	zf-C2H2	PF00096.26	1.9e-20	2	4
ENSPTRP00000085130	zf-C2H2	PF00096.26	1.9e-20	3	4
ENSPTRP00000085130	zf-C2H2	PF00096.26	1.9e-20	4	4
ENSPTRP00000085130	zf-met	PF12874.7	0.00074	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000085982	ZIC3-203	1371	XM_009439705	ENSPTRP00000085130	456 (aa)	XP_009437980	A0A2I3T7A6
ENSPTRT00000106555	ZIC3-201	4029	XM_016944281	ENSPTRP00000085592	466 (aa)	XP_016799770	A0A2I3RP19
ENSPTRT00000081956	ZIC3-202	4039	XM_024353117	ENSPTRP00000066439	466 (aa)	XP_024208885	A0A2I3RP19

Gene Model

Click here to download ENSPTRG00000043849's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000043849's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000043849	ZIC3	100	99.572	ENSG00000156925	ZIC3	100	99.572	Homo_sapiens
ENSPTRG00000043849	ZIC3	100	98.929	ENSANAG00000019614	ZIC3	100	98.929	Aotus_nancymaae
ENSPTRG00000043849	ZIC3	100	98.501	ENSCJAG00000013792	ZIC3	100	98.501	Callithrix_jacchus
ENSPTRG00000043849	ZIC3	100	98.498	ENSCAFG00000018979	ZIC3	100	98.498	Canis_familiaris
ENSPTRG00000043849	ZIC3	100	95.503	ENSTSYG00000003356	ZIC3	100	95.717	Carlito_syrichta
ENSPTRG00000043849	ZIC3	53	98.780	ENSCPOG00000002374	ZIC3	100	98.780	Cavia_porcellus
ENSPTRG00000043849	ZIC3	100	98.715	ENSCCAG00000025983	ZIC3	100	98.715	Cebus_capucinus
ENSPTRG00000043849	ZIC3	100	99.142	ENSCATG00000036569	ZIC3	100	99.142	Cercocebus_atys
ENSPTRG00000043849	ZIC3	100	98.501	ENSCLAG00000001934	ZIC3	100	98.501	Chinchilla_lanigera
ENSPTRG00000043849	ZIC3	93	86.437	ENSCPBG00000026115	ZIC3	100	86.437	Chrysemys_picta_bellii
ENSPTRG00000043849	ZIC3	100	98.927	ENSCANG00000017505	ZIC3	100	98.927	Colobus_angolensis_palliatus
ENSPTRG00000043849	ZIC3	100	98.287	ENSCGRG00001024527	Zic3	100	98.287	Cricetulus_griseus_chok1gshd
ENSPTRG00000043849	ZIC3	100	97.430	ENSDORG00000025481	Zic3	100	97.430	Dipodomys_ordii
ENSPTRG00000043849	ZIC3	100	98.498	ENSFCAG00000025684	ZIC3	100	98.498	Felis_catus
ENSPTRG00000043849	ZIC3	80	98.383	ENSFDAG00000014929	ZIC3	100	99.593	Fukomys_damarensis
ENSPTRG00000043849	ZIC3	94	80.638	ENSGAGG00000004149	ZIC3	92	80.638	Gopherus_agassizii
ENSPTRG00000043849	ZIC3	100	100.000	ENSGGOG00000011914	ZIC3	100	100.000	Gorilla_gorilla
ENSPTRG00000043849	ZIC3	100	97.430	ENSHGLG00000006298	ZIC3	100	97.430	Heterocephalus_glaber_female
ENSPTRG00000043849	ZIC3	67	69.737	ENSHGLG00100002829	ZIC3	100	77.070	Heterocephalus_glaber_male
ENSPTRG00000043849	ZIC3	100	98.287	ENSJJAG00000022714	Zic3	100	98.287	Jaculus_jaculus
ENSPTRG00000043849	ZIC3	100	76.445	ENSLACG00000014597	ZIC3	100	76.445	Latimeria_chalumnae
ENSPTRG00000043849	ZIC3	88	94.161	ENSLAFG00000007048	ZIC3	99	94.161	Loxodonta_africana
ENSPTRG00000043849	ZIC3	100	99.142	ENSMFAG00000027018	ZIC3	100	99.142	Macaca_fascicularis
ENSPTRG00000043849	ZIC3	100	99.123	ENSMMUG00000002023	ZIC3	100	99.123	Macaca_mulatta
ENSPTRG00000043849	ZIC3	100	99.142	ENSMNEG00000040682	ZIC3	100	99.142	Macaca_nemestrina
ENSPTRG00000043849	ZIC3	100	99.142	ENSMLEG00000004378	ZIC3	100	99.142	Mandrillus_leucophaeus
ENSPTRG00000043849	ZIC3	100	98.073	ENSMAUG00000009402	Zic3	100	98.073	Mesocricetus_auratus
ENSPTRG00000043849	ZIC3	100	98.501	ENSMICG00000042529	ZIC3	100	98.501	Microcebus_murinus
ENSPTRG00000043849	ZIC3	100	97.859	ENSMOCG00000020544	Zic3	100	97.859	Microtus_ochrogaster
ENSPTRG00000043849	ZIC3	100	98.287	MGP_CAROLIEiJ_G0033101	Zic3	100	99.593	Mus_caroli
ENSPTRG00000043849	ZIC3	100	98.287	ENSMUSG00000067860	Zic3	100	99.593	Mus_musculus
ENSPTRG00000043849	ZIC3	100	98.287	MGP_PahariEiJ_G0031644	Zic3	100	99.593	Mus_pahari
ENSPTRG00000043849	ZIC3	100	98.287	MGP_SPRETEiJ_G0034256	Zic3	100	99.593	Mus_spretus
ENSPTRG00000043849	ZIC3	100	97.430	ENSNGAG00000023346	Zic3	100	97.430	Nannospalax_galili
ENSPTRG00000043849	ZIC3	78	99.262	ENSNLEG00000003005	-	100	99.262	Nomascus_leucogenys
ENSPTRG00000043849	ZIC3	100	98.287	ENSODEG00000005556	ZIC3	100	98.287	Octodon_degus
ENSPTRG00000043849	ZIC3	100	100.000	ENSPPAG00000030013	ZIC3	100	100.000	Pan_paniscus
ENSPTRG00000043849	ZIC3	100	98.073	ENSPPRG00000010839	ZIC3	100	98.073	Panthera_pardus
ENSPTRG00000043849	ZIC3	100	99.142	ENSPANG00000011357	ZIC3	100	99.142	Papio_anubis
ENSPTRG00000043849	ZIC3	100	73.504	ENSPKIG00000017705	zic3	100	73.504	Paramormyrops_kingsleyae
ENSPTRG00000043849	ZIC3	62	90.068	ENSPSIG00000011896	ZIC3	99	90.068	Pelodiscus_sinensis
ENSPTRG00000043849	ZIC3	100	98.073	ENSPEMG00000022168	Zic3	100	98.073	Peromyscus_maniculatus_bairdii
ENSPTRG00000043849	ZIC3	100	98.498	ENSPCOG00000021557	ZIC3	100	98.498	Propithecus_coquereli
ENSPTRG00000043849	ZIC3	100	97.859	ENSRNOG00000000861	Zic3	100	97.859	Rattus_norvegicus
ENSPTRG00000043849	ZIC3	100	98.927	ENSRBIG00000030660	ZIC3	100	98.927	Rhinopithecus_bieti
ENSPTRG00000043849	ZIC3	100	98.927	ENSRROG00000028410	ZIC3	100	98.927	Rhinopithecus_roxellana
ENSPTRG00000043849	ZIC3	100	98.715	ENSSBOG00000024684	ZIC3	100	98.715	Saimiri_boliviensis_boliviensis
ENSPTRG00000043849	ZIC3	99	74.678	ENSSFOG00015011731	zic3	100	74.678	Scleropages_formosus
ENSPTRG00000043849	ZIC3	99	68.670	ENSSFOG00015008079	zic3	100	68.670	Scleropages_formosus
ENSPTRG00000043849	ZIC3	84	83.291	ENSTGUG00000002155	ZIC3	100	83.291	Taeniopygia_guttata
ENSPTRG00000043849	ZIC3	100	98.498	ENSVVUG00000021378	ZIC3	100	98.498	Vulpes_vulpes
ENSPTRG00000043849	ZIC3	100	76.759	ENSXETG00000024458	zic3	100	76.759	Xenopus_tropicalis