EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTRG00000043963 (Gene tree)
Gene ID
107976468
Gene Symbol
-
Alias
-
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Pan_troglodytes
Status
putative
Strand
Plus strand
Length
13524 bases
Position
chrKV421068.1:32762-46285
Accession
107976468
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTRP00000081650RRM_1PF00076.222.9e-4312
ENSPTRP00000081650RRM_1PF00076.222.9e-4322
ENSPTRP00000063885RRM_1PF00076.223.3e-4312
ENSPTRP00000063885RRM_1PF00076.223.3e-4322
ENSPTRP00000084632RRM_1PF00076.223.5e-4312
ENSPTRP00000084632RRM_1PF00076.223.5e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTRT00000106100-1629XM_003311961ENSPTRP00000081650542 (aa)XP_003312009A0A2I3SXC3
ENSPTRT00000096483-1593-ENSPTRP00000084632530 (aa)-A0A2I3T5Z1
ENSPTRT00000102609-2379-ENSPTRP00000069253127 (aa)-A0A2I3RX07
ENSPTRT00000110891-1680XM_003951361ENSPTRP00000063885559 (aa)XP_003951410A0A2I3RGU7
Gene Model
Click here to download ENSPTRG00000043963's gene model file
Pathways
Pathway IDPathway NameSource
ptr03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000043963's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTRG00000043963-5136.000ENSPTRG00000011523U2AF28337.255
ENSPTRG00000043963-99100.000ENSPTRG00000020670PUF6099100.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTRG00000043963-9999.819ENSG00000179950PUF6010099.806Homo_sapiens
ENSPTRG00000043963-9885.389ENSAPOG00000001713puf60b9985.417Acanthochromis_polyacanthus
ENSPTRG00000043963-9997.278ENSAMEG00000006406PUF609997.278Ailuropoda_melanoleuca
ENSPTRG00000043963-9785.413ENSACIG00000021705puf60b10085.413Amphilophus_citrinellus
ENSPTRG00000043963-9777.159ENSACIG00000003263-9977.586Amphilophus_citrinellus
ENSPTRG00000043963-9980.791ENSAOCG00000015558-9981.749Amphiprion_ocellaris
ENSPTRG00000043963-9885.389ENSAOCG00000005395puf60b10086.180Amphiprion_ocellaris
ENSPTRG00000043963-9772.553ENSAPEG00000001836-9976.471Amphiprion_percula
ENSPTRG00000043963-9879.886ENSAPEG00000011923puf60b9982.583Amphiprion_percula
ENSPTRG00000043963-9980.566ENSATEG00000006303-9981.333Anabas_testudineus
ENSPTRG00000043963-9885.199ENSATEG00000001730puf60b9985.227Anabas_testudineus
ENSPTRG00000043963-9897.893ENSAPLG00000010150PUF6010097.893Anas_platyrhynchos
ENSPTRG00000043963-9995.833ENSACAG00000001645PUF609895.833Anolis_carolinensis
ENSPTRG00000043963-9999.051ENSANAG00000018626PUF6010099.419Aotus_nancymaae
ENSPTRG00000043963-9785.413ENSACLG00000004462puf60b10085.413Astatotilapia_calliptera
ENSPTRG00000043963-9884.299ENSAMXG00000036570puf60a9784.932Astyanax_mexicanus
ENSPTRG00000043963-9776.636ENSAMXG00000041030puf60b10076.923Astyanax_mexicanus
ENSPTRG00000043963-9998.672ENSBTAG00000037493PUF609999.042Bos_taurus
ENSPTRG00000043963-8050.162WBGene00004389rnp-68951.634Caenorhabditis_elegans
ENSPTRG00000043963-9999.241ENSCJAG00000021485PUF609999.241Callithrix_jacchus
ENSPTRG00000043963-10098.750ENSCAFG00000001400PUF6010098.750Canis_familiaris
ENSPTRG00000043963-9999.275ENSCAFG00020018754PUF609999.275Canis_lupus_dingo
ENSPTRG00000043963-10098.748ENSCHIG00000001618PUF609398.748Capra_hircus
ENSPTRG00000043963-9998.861ENSTSYG00000011912PUF6010099.419Carlito_syrichta
ENSPTRG00000043963-9992.819ENSCPOG00000014613PUF609593.446Cavia_porcellus
ENSPTRG00000043963-9999.051ENSCCAG00000007744PUF609999.051Cebus_capucinus
ENSPTRG00000043963-9999.819ENSCATG00000035405PUF609999.819Cercocebus_atys
ENSPTRG00000043963-9998.381ENSCLAG00000009154PUF609998.381Chinchilla_lanigera
ENSPTRG00000043963-9799.806ENSCSAG00000008878PUF6010099.806Chlorocebus_sabaeus
ENSPTRG00000043963-9997.338ENSCPBG00000005595PUF609997.338Chrysemys_picta_bellii
ENSPTRG00000043963-6259.882ENSCING00000002156-8763.043Ciona_intestinalis
ENSPTRG00000043963-9848.423ENSCING00000008436-9849.427Ciona_intestinalis
ENSPTRG00000043963-9555.364ENSCSAVG00000001385-9955.000Ciona_savignyi
ENSPTRG00000043963-9548.911ENSCSAVG00000004765-9750.206Ciona_savignyi
ENSPTRG00000043963-8099.770ENSCANG00000041843PUF6010099.770Colobus_angolensis_palliatus
ENSPTRG00000043963-9997.662ENSCGRG00001017442Puf609997.662Cricetulus_griseus_chok1gshd
ENSPTRG00000043963-9898.467ENSCGRG00000003717Puf609997.148Cricetulus_griseus_crigri
ENSPTRG00000043963-9971.751ENSCSEG00000014845-8977.273Cynoglossus_semilaevis
ENSPTRG00000043963-9884.630ENSCSEG00000019887puf60b9384.440Cynoglossus_semilaevis
ENSPTRG00000043963-8979.789ENSCVAG00000001560-9879.536Cyprinodon_variegatus
ENSPTRG00000043963-9784.645ENSCVAG00000009386puf60b10085.797Cyprinodon_variegatus
ENSPTRG00000043963-9787.146ENSDARG00000032175puf60a9994.043Danio_rerio
ENSPTRG00000043963-9778.571ENSDARG00000001241puf60b9996.032Danio_rerio
ENSPTRG00000043963-10081.172ENSDNOG00000043278PUF6010081.172Dasypus_novemcinctus
ENSPTRG00000043963-9999.093ENSDORG00000004585Puf6010099.093Dipodomys_ordii
ENSPTRG00000043963-9548.969FBgn0028577hfp9947.523Drosophila_melanogaster
ENSPTRG00000043963-9569.841ENSEBUG00000005470-8872.016Eptatretus_burgeri
ENSPTRG00000043963-9860.672ENSEBUG00000014291puf60b8565.739Eptatretus_burgeri
ENSPTRG00000043963-9999.275ENSEASG00005009695PUF609999.275Equus_asinus_asinus
ENSPTRG00000043963-10098.491ENSECAG00000024681PUF609999.096Equus_caballus
ENSPTRG00000043963-9984.428ENSELUG00000018443-9985.602Esox_lucius
ENSPTRG00000043963-9982.830ENSELUG00000006507puf60b9980.220Esox_lucius
ENSPTRG00000043963-9998.672ENSFCAG00000001045PUF6010099.031Felis_catus
ENSPTRG00000043963-9985.115ENSFALG00000001136PUF609986.286Ficedula_albicollis
ENSPTRG00000043963-9998.022ENSFDAG00000017177PUF609998.022Fukomys_damarensis
ENSPTRG00000043963-9884.061ENSFHEG00000020046puf60b10085.988Fundulus_heteroclitus
ENSPTRG00000043963-9379.116ENSFHEG00000021687PUF6010079.959Fundulus_heteroclitus
ENSPTRG00000043963-9871.429ENSGMOG00000006392puf60b10070.677Gadus_morhua
ENSPTRG00000043963-6597.674ENSGALG00000039901PUF609497.674Gallus_gallus
ENSPTRG00000043963-9883.302ENSGAFG00000021040puf60b10085.413Gambusia_affinis
ENSPTRG00000043963-9779.344ENSGAFG00000004334-9978.764Gambusia_affinis
ENSPTRG00000043963-9969.639ENSGACG00000001484-10069.231Gasterosteus_aculeatus
ENSPTRG00000043963-9972.846ENSGACG00000004717puf60b9972.180Gasterosteus_aculeatus
ENSPTRG00000043963-9997.338ENSGAGG00000013289PUF609397.338Gopherus_agassizii
ENSPTRG00000043963-10099.811ENSGGOG00000004646PUF6010099.811Gorilla_gorilla
ENSPTRG00000043963-9884.630ENSHBUG00000015118puf60b10085.413Haplochromis_burtoni
ENSPTRG00000043963-9981.203ENSHBUG00000009634-10082.540Haplochromis_burtoni
ENSPTRG00000043963-9998.022ENSHGLG00000006111PUF609998.022Heterocephalus_glaber_female
ENSPTRG00000043963-9998.022ENSHGLG00100012362PUF609998.022Heterocephalus_glaber_male
ENSPTRG00000043963-9666.601ENSHCOG00000000378-9964.850Hippocampus_comes
ENSPTRG00000043963-9881.952ENSHCOG00000015541puf60b10081.550Hippocampus_comes
ENSPTRG00000043963-9782.420ENSIPUG00000002453puf60a9982.798Ictalurus_punctatus
ENSPTRG00000043963-9778.383ENSIPUG00000004660puf60b9978.154Ictalurus_punctatus
ENSPTRG00000043963-9999.093ENSSTOG00000025037PUF609999.093Ictidomys_tridecemlineatus
ENSPTRG00000043963-9998.375ENSJJAG00000001076Puf609998.375Jaculus_jaculus
ENSPTRG00000043963-9784.837ENSKMAG00000016745puf60b10085.988Kryptolebias_marmoratus
ENSPTRG00000043963-9778.072ENSKMAG00000010106-10075.560Kryptolebias_marmoratus
ENSPTRG00000043963-9983.117ENSLBEG00000012505puf60b10083.117Labrus_bergylta
ENSPTRG00000043963-6891.460ENSLACG00000005456PUF6010090.984Latimeria_chalumnae
ENSPTRG00000043963-9989.773ENSLOCG00000010106puf60b9988.973Lepisosteus_oculatus
ENSPTRG00000043963-10096.243ENSLAFG00000022929PUF6010096.243Loxodonta_africana
ENSPTRG00000043963-9999.819ENSMFAG00000043373PUF609999.819Macaca_fascicularis
ENSPTRG00000043963-10099.811ENSMMUG00000013558PUF6010099.811Macaca_mulatta
ENSPTRG00000043963-9999.819ENSMNEG00000031099PUF609999.819Macaca_nemestrina
ENSPTRG00000043963-9799.806ENSMLEG00000040009PUF6010099.806Mandrillus_leucophaeus
ENSPTRG00000043963-9981.955ENSMAMG00000019476-9981.973Mastacembelus_armatus
ENSPTRG00000043963-9885.009ENSMAMG00000010394puf60b10083.551Mastacembelus_armatus
ENSPTRG00000043963-9981.391ENSMZEG00005019425-9981.784Maylandia_zebra
ENSPTRG00000043963-9785.413ENSMZEG00005018515puf60b10085.413Maylandia_zebra
ENSPTRG00000043963-9997.714ENSMGAG00000013070PUF609997.714Meleagris_gallopavo
ENSPTRG00000043963-9380.160ENSMAUG00000018549-9583.230Mesocricetus_auratus
ENSPTRG00000043963-7197.250ENSMAUG00000014267-9897.250Mesocricetus_auratus
ENSPTRG00000043963-9999.093ENSMICG00000012226PUF609999.425Microcebus_murinus
ENSPTRG00000043963-9997.842ENSMOCG00000018780Puf609997.842Microtus_ochrogaster
ENSPTRG00000043963-9872.658ENSMMOG00000018059-9976.484Mola_mola
ENSPTRG00000043963-9785.605ENSMMOG00000004217puf60b10085.605Mola_mola
ENSPTRG00000043963-10097.004ENSMODG00000009161PUF609997.566Monodelphis_domestica
ENSPTRG00000043963-9979.887ENSMALG00000000200-9979.057Monopterus_albus
ENSPTRG00000043963-9877.609ENSMALG00000006797puf60b9977.652Monopterus_albus
ENSPTRG00000043963-9997.662MGP_CAROLIEiJ_G0019910Puf609997.662Mus_caroli
ENSPTRG00000043963-9997.662ENSMUSG00000002524Puf609997.662Mus_musculus
ENSPTRG00000043963-9997.662MGP_PahariEiJ_G0019920Puf609997.662Mus_pahari
ENSPTRG00000043963-9997.662MGP_SPRETEiJ_G0020812Puf609997.662Mus_spretus
ENSPTRG00000043963-9998.734ENSMPUG00000008137PUF609898.734Mustela_putorius_furo
ENSPTRG00000043963-9991.429ENSMLUG00000013032-9894.851Myotis_lucifugus
ENSPTRG00000043963-10098.211ENSMLUG00000000238-9998.211Myotis_lucifugus
ENSPTRG00000043963-9998.022ENSNGAG00000000712Puf6010098.837Nannospalax_galili
ENSPTRG00000043963-9981.579ENSNBRG00000017223-9981.939Neolamprologus_brichardi
ENSPTRG00000043963-8281.457ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSPTRG00000043963-10099.811ENSNLEG00000002156PUF6010099.811Nomascus_leucogenys
ENSPTRG00000043963-7399.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSPTRG00000043963-9573.767ENSODEG00000015513-9970.998Octodon_degus
ENSPTRG00000043963-73100.000ENSODEG00000014024-98100.000Octodon_degus
ENSPTRG00000043963-9884.630ENSONIG00000006247puf60b9984.659Oreochromis_niloticus
ENSPTRG00000043963-9981.579ENSONIG00000014030-9982.008Oreochromis_niloticus
ENSPTRG00000043963-9678.016ENSOANG00000006962PUF609978.320Ornithorhynchus_anatinus
ENSPTRG00000043963-9778.598ENSORLG00000028655-9978.707Oryzias_latipes
ENSPTRG00000043963-9884.630ENSORLG00000012279puf60b10084.837Oryzias_latipes
ENSPTRG00000043963-9978.131ENSORLG00020018144-9978.236Oryzias_latipes_hni
ENSPTRG00000043963-9884.630ENSORLG00020007333puf6010084.837Oryzias_latipes_hni
ENSPTRG00000043963-9977.944ENSORLG00015016833-9978.049Oryzias_latipes_hsok
ENSPTRG00000043963-9883.743ENSORLG00015007718puf60b10084.704Oryzias_latipes_hsok
ENSPTRG00000043963-9979.135ENSOMEG00000022185-9979.135Oryzias_melastigma
ENSPTRG00000043963-9882.156ENSOMEG00000001643puf60b9983.030Oryzias_melastigma
ENSPTRG00000043963-10098.927ENSOGAG00000006259PUF6010098.927Otolemur_garnettii
ENSPTRG00000043963-9896.552ENSOARG00000016235PUF609996.558Ovis_aries
ENSPTRG00000043963-9999.819ENSPPAG00000029933PUF609999.819Pan_paniscus
ENSPTRG00000043963-9998.672ENSPPRG00000003257PUF6010099.031Panthera_pardus
ENSPTRG00000043963-9998.321ENSPTIG00000009795PUF609996.743Panthera_tigris_altaica
ENSPTRG00000043963-9999.819ENSPANG00000021936PUF609999.819Papio_anubis
ENSPTRG00000043963-9985.338ENSPKIG00000004295puf60a9992.059Paramormyrops_kingsleyae
ENSPTRG00000043963-9986.957ENSPKIG00000012204puf60b10087.885Paramormyrops_kingsleyae
ENSPTRG00000043963-9897.701ENSPSIG00000004679PUF609997.706Pelodiscus_sinensis
ENSPTRG00000043963-9784.351ENSPMGG00000013444puf60b9984.351Periophthalmus_magnuspinnatus
ENSPTRG00000043963-9997.842ENSPEMG00000008820Puf609997.842Peromyscus_maniculatus_bairdii
ENSPTRG00000043963-9998.853ENSPCIG00000020270PUF609999.040Phascolarctos_cinereus
ENSPTRG00000043963-9884.061ENSPFOG00000019217puf60b10084.630Poecilia_formosa
ENSPTRG00000043963-9979.623ENSPFOG00000011118-9979.962Poecilia_formosa
ENSPTRG00000043963-9784.837ENSPLAG00000010754puf60b10085.988Poecilia_latipinna
ENSPTRG00000043963-10079.143ENSPLAG00000017025-9379.104Poecilia_latipinna
ENSPTRG00000043963-9884.061ENSPMEG00000000838puf60b10085.988Poecilia_mexicana
ENSPTRG00000043963-10079.143ENSPMEG00000009767-9379.478Poecilia_mexicana
ENSPTRG00000043963-9881.331ENSPREG00000005440puf60b10083.730Poecilia_reticulata
ENSPTRG00000043963-7998.082ENSPPYG00000018951-9598.082Pongo_abelii
ENSPTRG00000043963-7999.041ENSPCAG00000014837PUF6010099.041Procavia_capensis
ENSPTRG00000043963-9998.915ENSPCOG00000027981PUF609999.234Propithecus_coquereli
ENSPTRG00000043963-97100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSPTRG00000043963-9785.413ENSPNYG00000002556puf60b10085.413Pundamilia_nyererei
ENSPTRG00000043963-9981.391ENSPNYG00000004273-9981.784Pundamilia_nyererei
ENSPTRG00000043963-9877.290ENSPNAG00000019415puf60b9178.599Pygocentrus_nattereri
ENSPTRG00000043963-9882.386ENSPNAG00000019909puf60a9984.766Pygocentrus_nattereri
ENSPTRG00000043963-9997.588ENSRNOG00000009960Puf609997.658Rattus_norvegicus
ENSPTRG00000043963-10099.811ENSRBIG00000035274PUF6010099.811Rhinopithecus_bieti
ENSPTRG00000043963-9999.819ENSRROG00000029360PUF609999.819Rhinopithecus_roxellana
ENSPTRG00000043963-10097.358ENSSBOG00000027089PUF609997.358Saimiri_boliviensis_boliviensis
ENSPTRG00000043963-9096.680ENSSHAG00000006668PUF609596.794Sarcophilus_harrisii
ENSPTRG00000043963-9386.032ENSSFOG00015019619puf60b9986.032Scleropages_formosus
ENSPTRG00000043963-9980.901ENSSFOG00015019371puf60a9886.922Scleropages_formosus
ENSPTRG00000043963-7391.638ENSSMAG00000016381puf60b7491.638Scophthalmus_maximus
ENSPTRG00000043963-9883.271ENSSDUG00000009935puf60b9984.242Seriola_dumerili
ENSPTRG00000043963-9979.584ENSSDUG00000007048-9979.962Seriola_dumerili
ENSPTRG00000043963-9780.228ENSSLDG00000007366-9980.645Seriola_lalandi_dorsalis
ENSPTRG00000043963-9985.038ENSSLDG00000024011puf60b10083.738Seriola_lalandi_dorsalis
ENSPTRG00000043963-6485.841ENSSPUG00000013518PUF609485.163Sphenodon_punctatus
ENSPTRG00000043963-9882.625ENSSPAG00000012144puf60b10083.925Stegastes_partitus
ENSPTRG00000043963-9781.870ENSSPAG00000020285-10082.443Stegastes_partitus
ENSPTRG00000043963-9998.551ENSSSCG00000038800PUF609898.614Sus_scrofa
ENSPTRG00000043963-9894.636ENSTGUG00000012797-10094.636Taeniopygia_guttata
ENSPTRG00000043963-9884.061ENSTRUG00000005420puf60b10082.617Takifugu_rubripes
ENSPTRG00000043963-9777.519ENSTRUG00000008843-10080.160Takifugu_rubripes
ENSPTRG00000043963-9877.778ENSTNIG00000003069-10077.820Tetraodon_nigroviridis
ENSPTRG00000043963-9884.061ENSTNIG00000013675puf60b10083.902Tetraodon_nigroviridis
ENSPTRG00000043963-6095.270ENSTBEG00000002751-9995.254Tupaia_belangeri
ENSPTRG00000043963-7981.214ENSTBEG00000001899-10081.503Tupaia_belangeri
ENSPTRG00000043963-9798.450ENSTTRG00000017088PUF6010098.450Tursiops_truncatus
ENSPTRG00000043963-9999.274ENSUAMG00000024917PUF609999.274Ursus_americanus
ENSPTRG00000043963-10094.275ENSUMAG00000000272PUF6010094.097Ursus_maritimus
ENSPTRG00000043963-9999.274ENSVVUG00000022527PUF6010099.419Vulpes_vulpes
ENSPTRG00000043963-9894.434ENSXETG00000012469puf609994.444Xenopus_tropicalis
ENSPTRG00000043963-9781.574ENSXCOG00000012355puf60b10085.516Xiphophorus_couchianus
ENSPTRG00000043963-9877.672ENSXMAG00000010507-9979.528Xiphophorus_maculatus
ENSPTRG00000043963-9884.061ENSXMAG00000001862puf60b10085.988Xiphophorus_maculatus

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