EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000044192 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 7644 bases
Position: chr20:46595648-46603291
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000072083	PABP	PF00658.18	2.8e-28	1	1
ENSPTRP00000083028	PABP	PF00658.18	5.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000105251	-	1590	XM_016937982	ENSPTRP00000072083	168 (aa)	-	A0A2I3S5G7
ENSPTRT00000091348	-	1515	XM_016937981	ENSPTRP00000083028	171 (aa)	-	A0A2I3T2B8

Gene Model

Click here to download ENSPTRG00000044192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000044192's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000044192	-	93	48.837	ENSPTRG00000045319	-	52	51.592
ENSPTRG00000044192	-	93	47.059	ENSPTRG00000047501	-	53	50.968
ENSPTRG00000044192	-	93	58.824	ENSPTRG00000047939	PABPC1	52	59.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000044192	-	100	100.000	ENSG00000101104	PABPC1L	100	100.000	Homo_sapiens
ENSPTRG00000044192	-	100	94.737	ENSANAG00000026826	PABPC1L	93	95.597	Aotus_nancymaae
ENSPTRG00000044192	-	96	75.155	ENSBTAG00000050862	-	80	78.231	Bos_taurus
ENSPTRG00000044192	-	100	95.238	ENSCJAG00000017628	PABPC1L	93	94.969	Callithrix_jacchus
ENSPTRG00000044192	-	100	82.143	ENSTSYG00000006645	PABPC1L	89	88.636	Carlito_syrichta
ENSPTRG00000044192	-	100	93.452	ENSCCAG00000023338	PABPC1L	91	94.853	Cebus_capucinus
ENSPTRG00000044192	-	100	96.429	ENSCATG00000034065	PABPC1L	93	95.597	Cercocebus_atys
ENSPTRG00000044192	-	89	57.333	ENSCPBG00000017765	-	78	59.420	Chrysemys_picta_bellii
ENSPTRG00000044192	-	93	77.576	ENSCANG00000037530	PABPC1L	91	75.472	Colobus_angolensis_palliatus
ENSPTRG00000044192	-	89	76.667	ENSEASG00005023406	-	85	77.536	Equus_asinus_asinus
ENSPTRG00000044192	-	100	75.595	ENSECAG00000022681	PABPC1L	93	76.282	Equus_caballus
ENSPTRG00000044192	-	100	98.830	ENSGGOG00000004584	PABPC1L	100	98.830	Gorilla_gorilla
ENSPTRG00000044192	-	100	97.024	ENSMFAG00000040365	PABPC1L	98	97.436	Macaca_fascicularis
ENSPTRG00000044192	-	91	97.436	ENSMMUG00000013209	-	99	96.622	Macaca_mulatta
ENSPTRG00000044192	-	93	86.164	ENSMNEG00000032298	PABPC1L	90	84.028	Macaca_nemestrina
ENSPTRG00000044192	-	100	96.429	ENSMLEG00000043139	PABPC1L	93	96.226	Mandrillus_leucophaeus
ENSPTRG00000044192	-	96	85.093	ENSMICG00000000974	-	91	86.577	Microcebus_murinus
ENSPTRG00000044192	-	93	96.855	ENSNLEG00000006653	-	93	96.855	Nomascus_leucogenys
ENSPTRG00000044192	-	100	100.000	ENSPPAG00000039677	PABPC1L	100	100.000	Pan_paniscus
ENSPTRG00000044192	-	87	80.822	ENSPPRG00000020242	-	90	82.090	Panthera_pardus
ENSPTRG00000044192	-	100	96.429	ENSPANG00000018788	PABPC1L	93	96.226	Papio_anubis
ENSPTRG00000044192	-	54	80.000	ENSPREG00000015197	-	73	80.000	Poecilia_reticulata
ENSPTRG00000044192	-	89	84.564	ENSPCOG00000020630	PABPC1L	91	83.824	Propithecus_coquereli
ENSPTRG00000044192	-	100	97.024	ENSRBIG00000035381	PABPC1L	100	96.491	Rhinopithecus_bieti
ENSPTRG00000044192	-	100	97.619	ENSRROG00000044498	PABPC1L	100	97.076	Rhinopithecus_roxellana
ENSPTRG00000044192	-	100	76.190	ENSSBOG00000020828	-	92	77.564	Saimiri_boliviensis_boliviensis
ENSPTRG00000044192	-	100	94.152	ENSSBOG00000009532	-	93	94.969	Saimiri_boliviensis_boliviensis
ENSPTRG00000044192	-	89	80.000	ENSUAMG00000017682	PABPC1L	90	80.435	Ursus_americanus