EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000045845 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 1610 bases
Position: chr14:4155252-4156861
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000092282	RRM_1	PF00076.22	5.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000089282	-	549	-	ENSPTRP00000092282	182 (aa)	-	A0A2I3TSU4

Gene Model

Click here to download ENSPTRG00000045845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000045845's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000045845	-	57	42.373	ENSPTRG00000018253	-	52	42.373
ENSPTRG00000045845	-	51	37.234	ENSPTRG00000052587	RBMX	79	41.935
ENSPTRG00000045845	-	70	97.656	ENSPTRG00000013661	RBM38	81	100.000
ENSPTRG00000045845	-	56	31.373	ENSPTRG00000009692	SRSF2	52	31.373
ENSPTRG00000045845	-	54	38.462	ENSPTRG00000052830	-	53	40.000
ENSPTRG00000045845	-	55	42.857	ENSPTRG00000019002	HNRNPA2B1	67	42.857
ENSPTRG00000045845	-	53	35.417	ENSPTRG00000048252	-	51	34.375
ENSPTRG00000045845	-	62	36.842	ENSPTRG00000005531	MSI1	59	36.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000045845	-	70	97.656	ENSG00000132819	RBM38	94	100.000	Homo_sapiens
ENSPTRG00000045845	-	68	84.127	ENSAPOG00000009939	-	57	84.127	Acanthochromis_polyacanthus
ENSPTRG00000045845	-	68	80.000	ENSAPOG00000003301	rbm38	50	80.000	Acanthochromis_polyacanthus
ENSPTRG00000045845	-	77	71.034	ENSACIG00000000010	rbm38	57	71.034	Amphilophus_citrinellus
ENSPTRG00000045845	-	66	87.500	ENSACIG00000012502	-	100	88.889	Amphilophus_citrinellus
ENSPTRG00000045845	-	68	84.127	ENSAOCG00000012559	RBM38	55	84.127	Amphiprion_ocellaris
ENSPTRG00000045845	-	68	80.000	ENSAOCG00000013497	-	50	80.000	Amphiprion_ocellaris
ENSPTRG00000045845	-	68	84.127	ENSAPEG00000023581	-	52	84.127	Amphiprion_percula
ENSPTRG00000045845	-	68	80.000	ENSAPEG00000013137	rbm38	54	80.000	Amphiprion_percula
ENSPTRG00000045845	-	68	84.127	ENSATEG00000016710	-	52	84.127	Anabas_testudineus
ENSPTRG00000045845	-	68	80.000	ENSATEG00000016366	rbm38	54	80.000	Anabas_testudineus
ENSPTRG00000045845	-	68	87.903	ENSACAG00000016238	RBM38	51	87.903	Anolis_carolinensis
ENSPTRG00000045845	-	70	97.656	ENSANAG00000031959	RBM38	81	100.000	Aotus_nancymaae
ENSPTRG00000045845	-	68	85.714	ENSACLG00000019514	-	52	85.714	Astatotilapia_calliptera
ENSPTRG00000045845	-	65	78.814	ENSAMXG00000038120	rbm38	50	78.814	Astyanax_mexicanus
ENSPTRG00000045845	-	68	85.714	ENSAMXG00000015601	-	54	85.714	Astyanax_mexicanus
ENSPTRG00000045845	-	68	97.581	ENSBTAG00000008105	RBM38	52	97.581	Bos_taurus
ENSPTRG00000045845	-	67	68.992	WBGene00006321	sup-12	59	85.393	Caenorhabditis_elegans
ENSPTRG00000045845	-	70	96.875	ENSCJAG00000019139	RBM38	81	100.000	Callithrix_jacchus
ENSPTRG00000045845	-	68	99.194	ENSCAFG00020021943	RBM38	52	99.194	Canis_lupus_dingo
ENSPTRG00000045845	-	68	96.774	ENSCHIG00000002609	RBM38	52	96.774	Capra_hircus
ENSPTRG00000045845	-	68	99.194	ENSCPOG00000012781	RBM38	52	99.194	Cavia_porcellus
ENSPTRG00000045845	-	70	96.875	ENSCCAG00000036872	RBM38	81	100.000	Cebus_capucinus
ENSPTRG00000045845	-	70	97.656	ENSCATG00000032133	RBM38	81	100.000	Cercocebus_atys
ENSPTRG00000045845	-	68	99.194	ENSCLAG00000005906	RBM38	54	99.194	Chinchilla_lanigera
ENSPTRG00000045845	-	70	97.656	ENSCSAG00000015503	RBM38	54	97.656	Chlorocebus_sabaeus
ENSPTRG00000045845	-	68	92.742	ENSCPBG00000024059	RBM38	58	92.742	Chrysemys_picta_bellii
ENSPTRG00000045845	-	70	96.094	ENSCGRG00001012928	Rbm38	54	96.094	Cricetulus_griseus_chok1gshd
ENSPTRG00000045845	-	66	87.500	ENSCSEG00000004701	-	53	87.500	Cynoglossus_semilaevis
ENSPTRG00000045845	-	80	77.852	ENSCVAG00000005472	-	58	77.852	Cyprinodon_variegatus
ENSPTRG00000045845	-	80	74.324	ENSDARG00000058818	rbm38	63	74.324	Danio_rerio
ENSPTRG00000045845	-	70	92.188	ENSDNOG00000032004	RBM38	61	92.188	Dasypus_novemcinctus
ENSPTRG00000045845	-	68	73.387	ENSEBUG00000015164	rbm38	75	73.387	Eptatretus_burgeri
ENSPTRG00000045845	-	68	97.581	ENSECAG00000007700	RBM38	52	97.581	Equus_caballus
ENSPTRG00000045845	-	68	96.774	ENSEEUG00000013489	RBM38	52	96.774	Erinaceus_europaeus
ENSPTRG00000045845	-	68	84.000	ENSELUG00000000585	-	56	84.000	Esox_lucius
ENSPTRG00000045845	-	68	80.153	ENSELUG00000005849	-	54	80.153	Esox_lucius
ENSPTRG00000045845	-	68	99.194	ENSFCAG00000042916	RBM38	81	98.980	Felis_catus
ENSPTRG00000045845	-	68	91.129	ENSFALG00000010805	RBM38	65	91.129	Ficedula_albicollis
ENSPTRG00000045845	-	75	79.286	ENSFHEG00000006160	-	63	79.286	Fundulus_heteroclitus
ENSPTRG00000045845	-	66	85.833	ENSGMOG00000016655	-	65	85.833	Gadus_morhua
ENSPTRG00000045845	-	70	89.062	ENSGALG00000026081	RBM38	60	89.062	Gallus_gallus
ENSPTRG00000045845	-	68	82.540	ENSGACG00000009873	-	58	82.540	Gasterosteus_aculeatus
ENSPTRG00000045845	-	82	68.627	ENSGACG00000015224	rbm38	74	68.627	Gasterosteus_aculeatus
ENSPTRG00000045845	-	68	92.742	ENSGAGG00000001187	RBM38	58	92.742	Gopherus_agassizii
ENSPTRG00000045845	-	66	88.333	ENSHBUG00000011778	-	55	85.714	Haplochromis_burtoni
ENSPTRG00000045845	-	77	71.724	ENSHBUG00000012058	rbm38	61	71.724	Haplochromis_burtoni
ENSPTRG00000045845	-	68	98.387	ENSHGLG00000015077	RBM38	52	98.387	Heterocephalus_glaber_female
ENSPTRG00000045845	-	68	74.797	ENSHCOG00000019040	rbm38	53	74.797	Hippocampus_comes
ENSPTRG00000045845	-	68	85.714	ENSIPUG00000019349	-	53	85.714	Ictalurus_punctatus
ENSPTRG00000045845	-	65	73.554	ENSKMAG00000012402	rbm38	51	73.554	Kryptolebias_marmoratus
ENSPTRG00000045845	-	70	78.295	ENSLBEG00000018878	rbm38	52	78.295	Labrus_bergylta
ENSPTRG00000045845	-	66	85.833	ENSLBEG00000016163	RBM38	52	85.833	Labrus_bergylta
ENSPTRG00000045845	-	68	87.200	ENSLOCG00000003456	rbm38	55	87.200	Lepisosteus_oculatus
ENSPTRG00000045845	-	70	97.656	ENSMFAG00000043808	RBM38	81	100.000	Macaca_fascicularis
ENSPTRG00000045845	-	70	97.656	ENSMMUG00000031391	RBM38	81	100.000	Macaca_mulatta
ENSPTRG00000045845	-	70	97.656	ENSMNEG00000034683	RBM38	81	100.000	Macaca_nemestrina
ENSPTRG00000045845	-	60	84.404	ENSMLEG00000043261	-	88	84.404	Mandrillus_leucophaeus
ENSPTRG00000045845	-	68	84.921	ENSMAMG00000020499	RBM38	52	84.921	Mastacembelus_armatus
ENSPTRG00000045845	-	68	79.200	ENSMAMG00000024135	rbm38	50	79.200	Mastacembelus_armatus
ENSPTRG00000045845	-	66	88.333	ENSMZEG00005000849	-	55	85.714	Maylandia_zebra
ENSPTRG00000045845	-	77	71.724	ENSMZEG00005026036	rbm38	58	71.724	Maylandia_zebra
ENSPTRG00000045845	-	70	95.312	ENSMAUG00000021211	Rbm38	54	95.312	Mesocricetus_auratus
ENSPTRG00000045845	-	68	100.000	ENSMICG00000038011	RBM38	57	100.000	Microcebus_murinus
ENSPTRG00000045845	-	70	96.094	ENSMOCG00000008715	Rbm38	54	96.094	Microtus_ochrogaster
ENSPTRG00000045845	-	66	86.667	ENSMMOG00000020051	-	56	84.127	Mola_mola
ENSPTRG00000045845	-	68	92.742	ENSMODG00000016458	RBM38	53	92.742	Monodelphis_domestica
ENSPTRG00000045845	-	68	77.419	ENSMALG00000022327	rbm38	53	77.419	Monopterus_albus
ENSPTRG00000045845	-	70	95.312	MGP_CAROLIEiJ_G0024745	Rbm38	63	100.000	Mus_caroli
ENSPTRG00000045845	-	70	96.094	ENSMUSG00000027510	Rbm38	63	100.000	Mus_musculus
ENSPTRG00000045845	-	70	95.312	MGP_PahariEiJ_G0026186	Rbm38	63	100.000	Mus_pahari
ENSPTRG00000045845	-	70	96.094	MGP_SPRETEiJ_G0025665	Rbm38	63	100.000	Mus_spretus
ENSPTRG00000045845	-	68	99.194	ENSMPUG00000006518	RBM38	61	99.194	Mustela_putorius_furo
ENSPTRG00000045845	-	68	96.774	ENSMLUG00000011140	RBM38	57	96.774	Myotis_lucifugus
ENSPTRG00000045845	-	77	72.414	ENSNBRG00000022685	rbm38	60	72.414	Neolamprologus_brichardi
ENSPTRG00000045845	-	68	85.714	ENSNBRG00000022545	-	52	85.714	Neolamprologus_brichardi
ENSPTRG00000045845	-	63	85.217	ENSMEUG00000005475	-	86	85.217	Notamacropus_eugenii
ENSPTRG00000045845	-	68	98.387	ENSODEG00000007980	RBM38	52	98.387	Octodon_degus
ENSPTRG00000045845	-	68	85.714	ENSONIG00000020324	-	52	85.714	Oreochromis_niloticus
ENSPTRG00000045845	-	77	71.724	ENSONIG00000017073	rbm38	59	71.724	Oreochromis_niloticus
ENSPTRG00000045845	-	66	86.667	ENSORLG00000027180	-	51	84.127	Oryzias_latipes
ENSPTRG00000045845	-	68	78.400	ENSORLG00000012154	rbm38	50	78.400	Oryzias_latipes
ENSPTRG00000045845	-	66	86.667	ENSORLG00020020751	-	51	84.127	Oryzias_latipes_hni
ENSPTRG00000045845	-	68	79.200	ENSORLG00020017871	rbm38	50	79.200	Oryzias_latipes_hni
ENSPTRG00000045845	-	68	79.200	ENSORLG00015012606	rbm38	51	79.508	Oryzias_latipes_hsok
ENSPTRG00000045845	-	66	86.667	ENSORLG00015017040	-	51	84.127	Oryzias_latipes_hsok
ENSPTRG00000045845	-	68	78.400	ENSOMEG00000006805	rbm38	50	78.400	Oryzias_melastigma
ENSPTRG00000045845	-	68	84.127	ENSOMEG00000023912	-	52	84.127	Oryzias_melastigma
ENSPTRG00000045845	-	68	100.000	ENSOGAG00000029136	RBM38	52	100.000	Otolemur_garnettii
ENSPTRG00000045845	-	68	99.194	ENSPPRG00000009507	RBM38	81	98.980	Panthera_pardus
ENSPTRG00000045845	-	68	70.968	ENSPANG00000033127	-	50	69.048	Papio_anubis
ENSPTRG00000045845	-	70	97.656	ENSPANG00000020919	-	81	100.000	Papio_anubis
ENSPTRG00000045845	-	68	81.250	ENSPKIG00000025417	rbm38	56	79.104	Paramormyrops_kingsleyae
ENSPTRG00000045845	-	66	88.333	ENSPKIG00000018122	-	100	88.034	Paramormyrops_kingsleyae
ENSPTRG00000045845	-	68	92.742	ENSPSIG00000011649	RBM38	53	92.742	Pelodiscus_sinensis
ENSPTRG00000045845	-	68	80.952	ENSPMGG00000017094	-	51	80.952	Periophthalmus_magnuspinnatus
ENSPTRG00000045845	-	69	78.740	ENSPMGG00000011343	rbm38	52	77.519	Periophthalmus_magnuspinnatus
ENSPTRG00000045845	-	68	91.935	ENSPCIG00000013648	RBM38	53	91.935	Phascolarctos_cinereus
ENSPTRG00000045845	-	74	81.884	ENSPLAG00000002500	-	56	81.884	Poecilia_latipinna
ENSPTRG00000045845	-	68	99.194	ENSPCOG00000026201	RBM38	80	100.000	Propithecus_coquereli
ENSPTRG00000045845	-	64	89.744	ENSPNYG00000019727	-	100	89.744	Pundamilia_nyererei
ENSPTRG00000045845	-	77	71.034	ENSPNYG00000021373	rbm38	61	71.034	Pundamilia_nyererei
ENSPTRG00000045845	-	68	85.714	ENSPNAG00000015123	-	88	88.496	Pygocentrus_nattereri
ENSPTRG00000045845	-	69	84.127	ENSPNAG00000010596	rbm38	54	84.127	Pygocentrus_nattereri
ENSPTRG00000045845	-	70	96.094	ENSRNOG00000006420	Rbm38	54	96.094	Rattus_norvegicus
ENSPTRG00000045845	-	70	73.438	ENSRROG00000036388	-	74	70.000	Rhinopithecus_roxellana
ENSPTRG00000045845	-	70	96.875	ENSSBOG00000031053	RBM38	92	100.000	Saimiri_boliviensis_boliviensis
ENSPTRG00000045845	-	66	87.500	ENSSFOG00015004453	rbm38	51	87.500	Scleropages_formosus
ENSPTRG00000045845	-	68	84.127	ENSSDUG00000021082	RBM38	52	84.127	Seriola_dumerili
ENSPTRG00000045845	-	68	80.000	ENSSDUG00000022611	rbm38	50	80.000	Seriola_dumerili
ENSPTRG00000045845	-	68	80.000	ENSSLDG00000010845	rbm38	55	80.000	Seriola_lalandi_dorsalis
ENSPTRG00000045845	-	68	84.127	ENSSLDG00000011778	RBM38	52	84.127	Seriola_lalandi_dorsalis
ENSPTRG00000045845	-	68	83.333	ENSSPAG00000020989	RBM38	57	83.333	Stegastes_partitus
ENSPTRG00000045845	-	68	80.000	ENSSPAG00000011113	rbm38	50	80.000	Stegastes_partitus
ENSPTRG00000045845	-	68	99.194	ENSSSCG00000007504	RBM38	52	99.194	Sus_scrofa
ENSPTRG00000045845	-	70	77.519	ENSTRUG00000024954	rbm38	52	77.519	Takifugu_rubripes
ENSPTRG00000045845	-	68	84.921	ENSTNIG00000007093	-	57	84.921	Tetraodon_nigroviridis
ENSPTRG00000045845	-	68	99.194	ENSUAMG00000019780	RBM38	52	99.194	Ursus_americanus
ENSPTRG00000045845	-	68	99.194	ENSVVUG00000017246	RBM38	52	99.194	Vulpes_vulpes
ENSPTRG00000045845	-	70	86.719	ENSXETG00000011268	rbm38	58	86.719	Xenopus_tropicalis
ENSPTRG00000045845	-	62	87.179	ENSXCOG00000017324	-	53	87.179	Xiphophorus_couchianus