EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000046270 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 12184 bases
Position: chrY:15040667-15052850
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000083595	RBM1CTR	PF08081.11	1.8e-19	1	1
ENSPTRP00000073171	RBM1CTR	PF08081.11	1.9e-19	1	1
ENSPTRP00000083440	RBM1CTR	PF08081.11	1.9e-19	1	1
ENSPTRP00000064207	RBM1CTR	PF08081.11	2e-19	1	1
ENSPTRP00000083595	RRM_1	PF00076.22	9.6e-21	1	1
ENSPTRP00000073171	RRM_1	PF00076.22	9.9e-21	1	1
ENSPTRP00000083440	RRM_1	PF00076.22	1e-20	1	1
ENSPTRP00000064207	RRM_1	PF00076.22	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000107488	-	1287	-	ENSPTRP00000083595	428 (aa)	-	A0A2I3T3Z2
ENSPTRT00000076938	-	1398	-	ENSPTRP00000064207	465 (aa)	-	A0A2I3RHP5
ENSPTRT00000091871	-	1332	-	ENSPTRP00000083440	443 (aa)	-	A0A2I3T3I6
ENSPTRT00000094071	-	1332	-	ENSPTRP00000073171	443 (aa)	-	A0A2I3S8K9

Gene Model

Click here to download ENSPTRG00000046270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000046270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000046270	-	100	88.800	ENSPTRG00000051022	-	100	88.800
ENSPTRG00000046270	-	100	94.805	ENSPTRG00000047385	-	100	94.805
ENSPTRG00000046270	-	100	92.441	ENSPTRG00000046311	-	100	92.441
ENSPTRG00000046270	-	78	36.599	ENSPTRG00000052216	-	95	45.338
ENSPTRG00000046270	-	94	42.067	ENSPTRG00000003312	RBMXL2	93	44.471
ENSPTRG00000046270	-	100	83.008	ENSPTRG00000045105	-	100	83.008
ENSPTRG00000046270	-	66	51.903	ENSPTRG00000034071	-	98	58.246
ENSPTRG00000046270	-	100	75.752	ENSPTRG00000049088	-	100	75.752
ENSPTRG00000046270	-	87	45.385	ENSPTRG00000049750	-	97	46.043
ENSPTRG00000046270	-	100	92.873	ENSPTRG00000051395	-	100	92.873
ENSPTRG00000046270	-	93	54.140	ENSPTRG00000052587	RBMX	92	79.167
ENSPTRG00000046270	-	100	92.225	ENSPTRG00000047951	-	100	92.225
ENSPTRG00000046270	-	100	92.857	ENSPTRG00000042791	-	100	92.857
ENSPTRG00000046270	-	100	87.905	ENSPTRG00000050914	-	100	87.905
ENSPTRG00000046270	-	100	92.225	ENSPTRG00000043157	-	100	92.225

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000046270	-	100	88.985	ENSG00000242389	RBMY1E	100	88.985	Homo_sapiens
ENSPTRG00000046270	-	100	89.417	ENSG00000234414	RBMY1A1	100	86.000	Homo_sapiens
ENSPTRG00000046270	-	100	86.400	ENSG00000226941	RBMY1J	100	86.400	Homo_sapiens
ENSPTRG00000046270	-	100	89.201	ENSG00000242875	RBMY1B	100	86.000	Homo_sapiens
ENSPTRG00000046270	-	100	89.201	ENSG00000244395	RBMY1D	90	95.890	Homo_sapiens
ENSPTRG00000046270	-	100	89.849	ENSG00000169800	RBMY1F	100	86.400	Homo_sapiens
ENSPTRG00000046270	-	87	84.475	ENSCSAG00000018304	-	81	84.475	Chlorocebus_sabaeus
ENSPTRG00000046270	-	88	69.469	ENSCSAG00000018310	-	100	54.262	Chlorocebus_sabaeus
ENSPTRG00000046270	-	89	41.606	ENSMUSG00000094511	Gm21693	87	41.606	Mus_musculus
ENSPTRG00000046270	-	91	41.197	ENSMUSG00000095948	Gm21708	87	41.197	Mus_musculus
ENSPTRG00000046270	-	91	41.549	ENSMUSG00000102053	Gm4064	87	41.549	Mus_musculus
ENSPTRG00000046270	-	91	41.549	ENSMUSG00000095852	Gm10256	87	41.549	Mus_musculus
ENSPTRG00000046270	-	91	41.197	ENSMUSG00000093987	Gm21704	87	41.197	Mus_musculus
ENSPTRG00000046270	-	91	41.549	ENSMUSG00000091987	Gm10352	87	41.549	Mus_musculus
ENSPTRG00000046270	-	91	41.197	ENSMUSG00000094658	Rbmy	87	41.197	Mus_musculus
ENSPTRG00000046270	-	91	41.197	ENSMUSG00000093918	Gm21677	87	41.197	Mus_musculus
ENSPTRG00000046270	-	91	42.254	ENSMUSG00000096520	Gm3376	87	42.254	Mus_musculus
ENSPTRG00000046270	-	79	41.228	ENSRNOG00000060963	Rbmy1j	95	39.765	Rattus_norvegicus
ENSPTRG00000046270	-	99	72.851	ENSRBIG00000007617	-	99	73.303	Rhinopithecus_bieti
ENSPTRG00000046270	-	98	54.023	ENSRBIG00000029066	-	100	54.023	Rhinopithecus_bieti
ENSPTRG00000046270	-	99	73.303	ENSRROG00000029740	-	99	73.756	Rhinopithecus_roxellana