EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000046274 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 929 bases
Position: chr17:38939437-38940365
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000087341	RRM_1	PF00076.22	3.5e-26	1	2
ENSPTRP00000087341	RRM_1	PF00076.22	3.5e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000093476	-	876	-	ENSPTRP00000087341	291 (aa)	-	A0A2I3TDS5

Gene Model

Click here to download ENSPTRG00000046274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000046274's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000046274	-	55	57.386	ENSPTRG00000006488	SRSF5	86	55.932
ENSPTRG00000046274	-	52	36.970	ENSPTRG00000005535	SRSF9	71	35.838
ENSPTRG00000046274	-	65	38.863	ENSPTRG00000049077	SRSF1	82	38.596
ENSPTRG00000046274	-	100	88.350	ENSPTRG00000044686	-	90	86.084

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000046274	-	100	88.350	ENSG00000124193	SRSF6	90	86.084	Homo_sapiens
ENSPTRG00000046274	-	100	73.248	ENSAMEG00000003710	SRSF6	90	71.028	Ailuropoda_melanoleuca
ENSPTRG00000046274	-	96	56.610	ENSACIG00000023658	-	56	72.626	Amphilophus_citrinellus
ENSPTRG00000046274	-	69	68.161	ENSACIG00000020091	-	95	68.504	Amphilophus_citrinellus
ENSPTRG00000046274	-	57	72.678	ENSAOCG00000004309	-	57	71.111	Amphiprion_ocellaris
ENSPTRG00000046274	-	75	61.250	ENSAPEG00000020746	-	65	67.027	Amphiprion_percula
ENSPTRG00000046274	-	57	73.016	ENSAPEG00000013086	-	53	73.118	Amphiprion_percula
ENSPTRG00000046274	-	56	71.978	ENSATEG00000007255	-	71	67.027	Anabas_testudineus
ENSPTRG00000046274	-	57	79.558	ENSACAG00000002061	SRSF6	89	74.434	Anolis_carolinensis
ENSPTRG00000046274	-	100	87.379	ENSANAG00000024080	SRSF6	90	85.113	Aotus_nancymaae
ENSPTRG00000046274	-	56	70.000	ENSAMXG00000003101	-	50	70.213	Astyanax_mexicanus
ENSPTRG00000046274	-	57	67.742	ENSAMXG00000042692	-	96	69.630	Astyanax_mexicanus
ENSPTRG00000046274	-	100	86.174	ENSBTAG00000008527	SRSF6	90	83.923	Bos_taurus
ENSPTRG00000046274	-	86	88.433	ENSCJAG00000048403	SRSF6	73	81.726	Callithrix_jacchus
ENSPTRG00000046274	-	100	86.174	ENSCAFG00000009289	SRSF6	90	83.923	Canis_familiaris
ENSPTRG00000046274	-	100	86.174	ENSCAFG00020013559	SRSF6	90	83.923	Canis_lupus_dingo
ENSPTRG00000046274	-	100	85.852	ENSCHIG00000009148	-	90	83.601	Capra_hircus
ENSPTRG00000046274	-	100	86.495	ENSCHIG00000015890	-	90	84.244	Capra_hircus
ENSPTRG00000046274	-	100	74.013	ENSTSYG00000026476	SRSF6	88	73.355	Carlito_syrichta
ENSPTRG00000046274	-	96	62.424	ENSCPOG00000011761	SRSF6	58	92.308	Cavia_porcellus
ENSPTRG00000046274	-	100	87.702	ENSCCAG00000026018	-	90	85.437	Cebus_capucinus
ENSPTRG00000046274	-	100	88.026	ENSCATG00000030794	SRSF6	90	85.761	Cercocebus_atys
ENSPTRG00000046274	-	100	86.817	ENSCLAG00000010247	SRSF6	91	84.566	Chinchilla_lanigera
ENSPTRG00000046274	-	100	88.026	ENSCSAG00000014022	SRSF6	90	85.761	Chlorocebus_sabaeus
ENSPTRG00000046274	-	85	94.444	ENSCHOG00000000561	SRSF6	72	94.444	Choloepus_hoffmanni
ENSPTRG00000046274	-	58	79.894	ENSCPBG00000018200	SRSF6	90	73.397	Chrysemys_picta_bellii
ENSPTRG00000046274	-	100	88.350	ENSCANG00000037774	-	90	86.084	Colobus_angolensis_palliatus
ENSPTRG00000046274	-	100	75.497	ENSCANG00000042529	-	88	74.834	Colobus_angolensis_palliatus
ENSPTRG00000046274	-	100	87.055	ENSCGRG00001022339	Srsf6	91	84.790	Cricetulus_griseus_chok1gshd
ENSPTRG00000046274	-	58	88.333	ENSCGRG00000006618	Srsf6	86	88.333	Cricetulus_griseus_crigri
ENSPTRG00000046274	-	57	67.914	ENSDARG00000016783	srsf6b	82	83.333	Danio_rerio
ENSPTRG00000046274	-	100	85.531	ENSDNOG00000008410	SRSF6	90	83.280	Dasypus_novemcinctus
ENSPTRG00000046274	-	100	87.138	ENSDORG00000028378	Srsf6	90	84.887	Dipodomys_ordii
ENSPTRG00000046274	-	100	81.935	ENSETEG00000006221	SRSF6	90	80.645	Echinops_telfairi
ENSPTRG00000046274	-	58	83.957	ENSEASG00005023429	SRSF6	90	64.309	Equus_asinus_asinus
ENSPTRG00000046274	-	58	83.957	ENSECAG00000023932	SRSF6	90	64.309	Equus_caballus
ENSPTRG00000046274	-	59	84.783	ENSEEUG00000002324	SRSF6	84	85.326	Erinaceus_europaeus
ENSPTRG00000046274	-	76	53.875	ENSELUG00000013506	SRSF6	70	80.769	Esox_lucius
ENSPTRG00000046274	-	57	73.118	ENSELUG00000024182	SRSF6	93	67.969	Esox_lucius
ENSPTRG00000046274	-	100	86.174	ENSFCAG00000032814	SRSF6	90	83.923	Felis_catus
ENSPTRG00000046274	-	100	74.013	ENSFDAG00000012191	SRSF6	89	73.355	Fukomys_damarensis
ENSPTRG00000046274	-	97	62.791	ENSFHEG00000023065	srsf6a	55	72.131	Fundulus_heteroclitus
ENSPTRG00000046274	-	56	71.667	ENSGMOG00000014458	srsf6a	52	67.708	Gadus_morhua
ENSPTRG00000046274	-	78	53.719	ENSGMOG00000006105	srsf6a	62	60.465	Gadus_morhua
ENSPTRG00000046274	-	57	77.540	ENSGALG00000000990	SRSF6	90	74.051	Gallus_gallus
ENSPTRG00000046274	-	97	52.976	ENSGACG00000006084	srsf6a	91	56.250	Gasterosteus_aculeatus
ENSPTRG00000046274	-	58	79.894	ENSGAGG00000003238	SRSF6	90	73.397	Gopherus_agassizii
ENSPTRG00000046274	-	100	88.350	ENSGGOG00000009808	SRSF6	90	86.084	Gorilla_gorilla
ENSPTRG00000046274	-	56	95.062	ENSGGOG00000043139	-	89	95.062	Gorilla_gorilla
ENSPTRG00000046274	-	68	64.758	ENSHBUG00000006386	-	58	71.667	Haplochromis_burtoni
ENSPTRG00000046274	-	98	70.034	ENSHGLG00000007701	-	57	65.027	Heterocephalus_glaber_female
ENSPTRG00000046274	-	100	86.817	ENSHGLG00000007348	SRSF6	91	84.566	Heterocephalus_glaber_female
ENSPTRG00000046274	-	100	74.013	ENSHGLG00100005043	SRSF6	89	73.355	Heterocephalus_glaber_male
ENSPTRG00000046274	-	57	73.034	ENSHCOG00000002740	srsf6a	57	70.950	Hippocampus_comes
ENSPTRG00000046274	-	54	70.115	ENSIPUG00000016856	SRSF6	63	62.617	Ictalurus_punctatus
ENSPTRG00000046274	-	97	58.249	ENSIPUG00000004776	-	64	76.111	Ictalurus_punctatus
ENSPTRG00000046274	-	100	88.350	ENSSTOG00000010866	SRSF6	90	86.084	Ictidomys_tridecemlineatus
ENSPTRG00000046274	-	58	86.111	ENSJJAG00000020690	Srsf6	85	86.111	Jaculus_jaculus
ENSPTRG00000046274	-	83	59.259	ENSKMAG00000011934	srsf6a	59	75.706	Kryptolebias_marmoratus
ENSPTRG00000046274	-	56	72.283	ENSLBEG00000007356	srsf6a	52	70.968	Labrus_bergylta
ENSPTRG00000046274	-	99	73.139	ENSLACG00000005466	SRSF6	54	77.174	Latimeria_chalumnae
ENSPTRG00000046274	-	70	83.111	ENSLAFG00000006682	SRSF6	82	85.377	Loxodonta_africana
ENSPTRG00000046274	-	100	88.026	ENSMFAG00000036925	SRSF6	90	85.761	Macaca_fascicularis
ENSPTRG00000046274	-	100	88.026	ENSMMUG00000006742	SRSF6	90	85.761	Macaca_mulatta
ENSPTRG00000046274	-	100	86.731	ENSMNEG00000038270	-	90	84.466	Macaca_nemestrina
ENSPTRG00000046274	-	100	87.379	ENSMNEG00000027392	-	90	85.113	Macaca_nemestrina
ENSPTRG00000046274	-	58	88.889	ENSMLEG00000031524	SRSF6	84	88.889	Mandrillus_leucophaeus
ENSPTRG00000046274	-	57	72.487	ENSMAMG00000017161	srsf6a	64	65.022	Mastacembelus_armatus
ENSPTRG00000046274	-	68	63.043	ENSMZEG00005008032	-	57	71.667	Maylandia_zebra
ENSPTRG00000046274	-	56	74.286	ENSMZEG00005020658	-	60	72.989	Maylandia_zebra
ENSPTRG00000046274	-	100	85.852	ENSMICG00000008537	SRSF6	90	83.923	Microcebus_murinus
ENSPTRG00000046274	-	58	88.333	ENSMOCG00000018738	Srsf6	86	88.333	Microtus_ochrogaster
ENSPTRG00000046274	-	58	82.353	ENSMODG00000003107	SRSF6	91	76.774	Monodelphis_domestica
ENSPTRG00000046274	-	100	86.408	MGP_CAROLIEiJ_G0024606	Srsf6	91	84.142	Mus_caroli
ENSPTRG00000046274	-	100	86.731	ENSMUSG00000016921	Srsf6	91	84.466	Mus_musculus
ENSPTRG00000046274	-	100	86.408	MGP_PahariEiJ_G0026050	Srsf6	91	84.142	Mus_pahari
ENSPTRG00000046274	-	100	86.731	MGP_SPRETEiJ_G0025528	Srsf6	91	84.466	Mus_spretus
ENSPTRG00000046274	-	58	83.957	ENSMPUG00000017692	SRSF6	65	80.108	Mustela_putorius_furo
ENSPTRG00000046274	-	100	71.383	ENSMLUG00000016618	SRSF6	90	67.069	Myotis_lucifugus
ENSPTRG00000046274	-	100	86.408	ENSNGAG00000017560	Srsf6	91	83.819	Nannospalax_galili
ENSPTRG00000046274	-	56	72.727	ENSNBRG00000001846	-	52	72.581	Neolamprologus_brichardi
ENSPTRG00000046274	-	57	71.429	ENSNBRG00000014709	-	58	71.667	Neolamprologus_brichardi
ENSPTRG00000046274	-	100	88.350	ENSNLEG00000006524	SRSF6	90	86.084	Nomascus_leucogenys
ENSPTRG00000046274	-	58	82.353	ENSMEUG00000014615	SRSF6	99	81.311	Notamacropus_eugenii
ENSPTRG00000046274	-	70	84.444	ENSOPRG00000002017	-	82	86.792	Ochotona_princeps
ENSPTRG00000046274	-	57	72.131	ENSONIG00000020247	-	53	70.166	Oreochromis_niloticus
ENSPTRG00000046274	-	56	73.224	ENSONIG00000001925	-	52	73.118	Oreochromis_niloticus
ENSPTRG00000046274	-	58	63.776	ENSOCUG00000009785	-	98	71.525	Oryctolagus_cuniculus
ENSPTRG00000046274	-	58	84.492	ENSOGAG00000014468	SRSF6	90	82.958	Otolemur_garnettii
ENSPTRG00000046274	-	100	82.051	ENSOARG00000003117	SRSF6	90	81.290	Ovis_aries
ENSPTRG00000046274	-	100	100.000	ENSPPAG00000043131	-	100	100.000	Pan_paniscus
ENSPTRG00000046274	-	100	88.026	ENSPPAG00000034327	-	90	85.761	Pan_paniscus
ENSPTRG00000046274	-	100	86.174	ENSPPRG00000008917	SRSF6	90	83.923	Panthera_pardus
ENSPTRG00000046274	-	58	86.813	ENSPTIG00000019153	SRSF6	84	86.813	Panthera_tigris_altaica
ENSPTRG00000046274	-	100	88.026	ENSPANG00000035224	SRSF6	90	85.761	Papio_anubis
ENSPTRG00000046274	-	55	65.746	ENSPKIG00000015703	-	89	63.478	Paramormyrops_kingsleyae
ENSPTRG00000046274	-	98	62.662	ENSPKIG00000018463	-	77	84.615	Paramormyrops_kingsleyae
ENSPTRG00000046274	-	98	60.714	ENSPMGG00000014963	srsf6a	55	72.826	Periophthalmus_magnuspinnatus
ENSPTRG00000046274	-	58	82.353	ENSPCIG00000003820	SRSF6	91	76.452	Phascolarctos_cinereus
ENSPTRG00000046274	-	57	74.302	ENSPFOG00000006437	srsf6a	50	70.526	Poecilia_formosa
ENSPTRG00000046274	-	57	69.892	ENSPLAG00000009243	srsf6a	80	69.291	Poecilia_latipinna
ENSPTRG00000046274	-	57	71.196	ENSPMEG00000006042	SRSF6	54	71.351	Poecilia_mexicana
ENSPTRG00000046274	-	100	88.350	ENSPPYG00000011019	SRSF6	90	86.084	Pongo_abelii
ENSPTRG00000046274	-	58	83.333	ENSPCAG00000010954	SRSF6	92	82.792	Procavia_capensis
ENSPTRG00000046274	-	100	86.174	ENSPCOG00000026364	SRSF6	90	83.923	Propithecus_coquereli
ENSPTRG00000046274	-	100	85.113	ENSPVAG00000015232	SRSF6	90	82.848	Pteropus_vampyrus
ENSPTRG00000046274	-	57	71.429	ENSPNYG00000004944	-	58	71.667	Pundamilia_nyererei
ENSPTRG00000046274	-	56	72.727	ENSPNYG00000011272	-	51	72.581	Pundamilia_nyererei
ENSPTRG00000046274	-	100	86.731	ENSRNOG00000006380	Srsf6	91	84.466	Rattus_norvegicus
ENSPTRG00000046274	-	100	86.842	ENSRBIG00000041414	SRSF6	90	86.513	Rhinopithecus_bieti
ENSPTRG00000046274	-	100	88.026	ENSRROG00000029989	SRSF6	90	85.761	Rhinopithecus_roxellana
ENSPTRG00000046274	-	100	63.576	ENSSBOG00000034078	-	54	65.363	Saimiri_boliviensis_boliviensis
ENSPTRG00000046274	-	100	87.702	ENSSBOG00000033708	-	90	85.437	Saimiri_boliviensis_boliviensis
ENSPTRG00000046274	-	58	82.353	ENSSHAG00000012805	SRSF6	91	76.774	Sarcophilus_harrisii
ENSPTRG00000046274	-	98	56.845	ENSSFOG00015019681	-	72	53.558	Scleropages_formosus
ENSPTRG00000046274	-	56	69.444	ENSSMAG00000017447	-	55	69.231	Scophthalmus_maximus
ENSPTRG00000046274	-	57	72.487	ENSSDUG00000016097	srsf6a	68	62.869	Seriola_dumerili
ENSPTRG00000046274	-	57	72.487	ENSSLDG00000022841	srsf6a	68	62.869	Seriola_lalandi_dorsalis
ENSPTRG00000046274	-	57	80.663	ENSSPUG00000004967	SRSF6	90	79.739	Sphenodon_punctatus
ENSPTRG00000046274	-	95	55.482	ENSSPAG00000002362	srsf6a	67	70.899	Stegastes_partitus
ENSPTRG00000046274	-	100	85.852	ENSSSCG00000007362	SRSF6	96	83.391	Sus_scrofa
ENSPTRG00000046274	-	57	79.891	ENSTGUG00000003455	SRSF6	90	74.441	Taeniopygia_guttata
ENSPTRG00000046274	-	97	63.123	ENSTNIG00000001692	srsf6a	57	72.581	Tetraodon_nigroviridis
ENSPTRG00000046274	-	89	82.971	ENSTBEG00000013448	SRSF6	88	80.435	Tupaia_belangeri
ENSPTRG00000046274	-	70	85.333	ENSTTRG00000015410	SRSF6	82	87.736	Tursiops_truncatus
ENSPTRG00000046274	-	100	86.174	ENSUAMG00000003559	SRSF6	90	83.923	Ursus_americanus
ENSPTRG00000046274	-	58	86.813	ENSUMAG00000001154	SRSF6	84	86.813	Ursus_maritimus
ENSPTRG00000046274	-	81	92.593	ENSVPAG00000003016	SRSF6	69	92.593	Vicugna_pacos
ENSPTRG00000046274	-	57	72.376	ENSXMAG00000021849	srsf6a	55	73.077	Xiphophorus_maculatus