EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000046311 (Gene tree)
Gene ID: 100609450
Gene Symbol: -
Alias: -
Full Name: RNA-binding motif protein%2C Y chromosome%2C family 1 member F/J-like
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 14510 bases
Position: chrY:9822926-9837435
Accession: 100609450
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000070639	RBM1CTR	PF08081.11	2e-19	1	1
ENSPTRP00000065125	RBM1CTR	PF08081.11	2.2e-19	1	1
ENSPTRP00000065125	RRM_1	PF00076.22	2e-21	1	1
ENSPTRP00000070639	RRM_1	PF00076.22	2.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000084134	-	1808	XM_016944723	ENSPTRP00000070639	460 (aa)	XP_016800212	A0A2I3S0W7
ENSPTRT00000110082	-	1950	-	ENSPTRP00000065125	497 (aa)	-	A0A2I3RKE5

Gene Model

Click here to download ENSPTRG00000046311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000046311's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000046311	-	86	54.630	ENSPTRG00000049750	-	97	55.556
ENSPTRG00000046311	-	65	56.667	ENSPTRG00000034071	-	98	54.118
ENSPTRG00000046311	-	100	92.441	ENSPTRG00000046270	-	100	92.441
ENSPTRG00000046311	-	100	97.586	ENSPTRG00000051022	-	100	97.586
ENSPTRG00000046311	-	100	96.177	ENSPTRG00000042791	-	100	96.177
ENSPTRG00000046311	-	100	92.141	ENSPTRG00000045105	-	100	92.141
ENSPTRG00000046311	-	100	96.328	ENSPTRG00000047385	-	100	96.328
ENSPTRG00000046311	-	100	93.261	ENSPTRG00000051395	-	100	93.261
ENSPTRG00000046311	-	100	88.016	ENSPTRG00000050914	-	100	88.016
ENSPTRG00000046311	-	75	50.769	ENSPTRG00000052216	-	95	51.000
ENSPTRG00000046311	-	96	57.413	ENSPTRG00000052587	RBMX	92	80.556
ENSPTRG00000046311	-	100	92.927	ENSPTRG00000047951	-	100	92.927
ENSPTRG00000046311	-	100	92.927	ENSPTRG00000043157	-	100	92.927
ENSPTRG00000046311	-	100	79.114	ENSPTRG00000049088	-	100	79.114
ENSPTRG00000046311	-	95	40.899	ENSPTRG00000003312	RBMXL2	93	53.506

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000046311	-	100	94.130	ENSG00000244395	RBMY1D	100	94.130	Homo_sapiens
ENSPTRG00000046311	-	100	94.783	ENSG00000169800	RBMY1F	100	94.783	Homo_sapiens
ENSPTRG00000046311	-	100	93.913	ENSG00000242389	RBMY1E	100	93.913	Homo_sapiens
ENSPTRG00000046311	-	100	94.348	ENSG00000234414	RBMY1A1	100	94.348	Homo_sapiens
ENSPTRG00000046311	-	100	94.130	ENSG00000242875	RBMY1B	100	94.130	Homo_sapiens
ENSPTRG00000046311	-	100	94.366	ENSG00000226941	RBMY1J	100	94.366	Homo_sapiens
ENSPTRG00000046311	-	100	66.667	ENSCSAG00000018304	-	100	67.068	Chlorocebus_sabaeus
ENSPTRG00000046311	-	99	54.037	ENSCSAG00000018310	-	100	54.656	Chlorocebus_sabaeus
ENSPTRG00000046311	-	92	43.403	ENSMUSG00000094658	Rbmy	87	43.403	Mus_musculus
ENSPTRG00000046311	-	92	43.403	ENSMUSG00000095948	Gm21708	87	43.403	Mus_musculus
ENSPTRG00000046311	-	92	43.750	ENSMUSG00000091987	Gm10352	87	43.750	Mus_musculus
ENSPTRG00000046311	-	90	43.403	ENSMUSG00000102053	Gm4064	87	43.403	Mus_musculus
ENSPTRG00000046311	-	92	43.662	ENSMUSG00000094511	Gm21693	87	43.662	Mus_musculus
ENSPTRG00000046311	-	92	43.403	ENSMUSG00000093987	Gm21704	87	43.403	Mus_musculus
ENSPTRG00000046311	-	92	44.444	ENSMUSG00000096520	Gm3376	87	44.444	Mus_musculus
ENSPTRG00000046311	-	92	43.750	ENSMUSG00000095852	Gm10256	87	43.750	Mus_musculus
ENSPTRG00000046311	-	92	43.403	ENSMUSG00000093918	Gm21677	87	43.403	Mus_musculus
ENSPTRG00000046311	-	85	46.021	ENSRNOG00000060963	Rbmy1j	84	46.897	Rattus_norvegicus
ENSPTRG00000046311	-	90	62.921	ENSRBIG00000029066	-	100	62.921	Rhinopithecus_bieti
ENSPTRG00000046311	-	99	73.270	ENSRBIG00000007617	-	99	73.270	Rhinopithecus_bieti
ENSPTRG00000046311	-	99	74.843	ENSRROG00000029740	-	99	74.843	Rhinopithecus_roxellana