EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000046602 (Gene tree)
Gene ID: 463398
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 8-like
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 882 bases
Position: chr7:46474186-46475067
Accession: 463398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000071876	RRM_1	PF00076.22	3.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000098187	-	882	XM_519086	ENSPTRP00000071876	293 (aa)	XP_519086	A0A2I3S4C8

Gene Model

Click here to download ENSPTRG00000046602's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03040	Spliceosome	KEGG
ptr05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000046602's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000046602	-	67	82.234	ENSPTRG00000043643	-	71	82.028

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000046602	-	61	67.213	ENSANAG00000031642	SRSF8	67	80.328	Aotus_nancymaae
ENSPTRG00000046602	-	58	67.241	ENSCCAG00000022864	SRSF8	71	73.272	Cebus_capucinus
ENSPTRG00000046602	-	94	79.286	ENSCATG00000020182	-	83	81.900	Cercocebus_atys
ENSPTRG00000046602	-	94	76.786	ENSCANG00000028971	-	83	78.281	Colobus_angolensis_palliatus
ENSPTRG00000046602	-	62	83.333	ENSCANG00000022047	SRSF8	72	80.198	Colobus_angolensis_palliatus
ENSPTRG00000046602	-	94	78.571	ENSMFAG00000040102	-	83	80.543	Macaca_fascicularis
ENSPTRG00000046602	-	77	82.684	ENSMMUG00000041575	-	79	82.432	Macaca_mulatta
ENSPTRG00000046602	-	94	78.571	ENSMNEG00000035040	-	83	80.543	Macaca_nemestrina
ENSPTRG00000046602	-	94	78.929	ENSMLEG00000032341	-	83	80.995	Mandrillus_leucophaeus
ENSPTRG00000046602	-	100	81.570	ENSNLEG00000031658	-	100	83.959	Nomascus_leucogenys
ENSPTRG00000046602	-	94	77.500	ENSPANG00000033434	-	83	79.186	Papio_anubis
ENSPTRG00000046602	-	94	78.214	ENSRROG00000043277	-	83	79.186	Rhinopithecus_roxellana