EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000047318 (Gene tree)
Gene ID: -
Gene Symbol: CLP1
Alias: -
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 4904 bases
Position: chr11:57419401-57424304
Accession: 451198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000062766	Clp1	PF06807.14	2.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000105522	-	2652	XM_016920911	ENSPTRP00000062766	425 (aa)	XP_016776400	G2HID9

Gene Model

Click here to download ENSPTRG00000047318's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000047318's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000047318	CLP1	100	100.000	ENSG00000172409	CLP1	100	100.000	Homo_sapiens
ENSPTRG00000047318	CLP1	98	77.123	ENSAPOG00000008242	clp1	96	77.123	Acanthochromis_polyacanthus
ENSPTRG00000047318	CLP1	100	99.529	ENSAMEG00000014551	CLP1	98	99.529	Ailuropoda_melanoleuca
ENSPTRG00000047318	CLP1	98	76.415	ENSACIG00000006310	clp1	95	76.415	Amphilophus_citrinellus
ENSPTRG00000047318	CLP1	100	75.751	ENSAOCG00000010681	clp1	100	75.751	Amphiprion_ocellaris
ENSPTRG00000047318	CLP1	98	77.123	ENSAPEG00000012165	clp1	99	77.123	Amphiprion_percula
ENSPTRG00000047318	CLP1	99	76.566	ENSATEG00000012374	clp1	98	76.566	Anabas_testudineus
ENSPTRG00000047318	CLP1	100	94.353	ENSACAG00000007139	CLP1	100	94.353	Anolis_carolinensis
ENSPTRG00000047318	CLP1	100	100.000	ENSANAG00000034935	CLP1	100	100.000	Aotus_nancymaae
ENSPTRG00000047318	CLP1	99	75.638	ENSACLG00000013573	clp1	98	75.638	Astatotilapia_calliptera
ENSPTRG00000047318	CLP1	97	78.860	ENSAMXG00000014194	clp1	98	78.860	Astyanax_mexicanus
ENSPTRG00000047318	CLP1	100	99.529	ENSBTAG00000006493	CLP1	100	99.529	Bos_taurus
ENSPTRG00000047318	CLP1	96	47.962	WBGene00010304	clpf-1	97	47.962	Caenorhabditis_elegans
ENSPTRG00000047318	CLP1	100	100.000	ENSCJAG00000008748	CLP1	100	100.000	Callithrix_jacchus
ENSPTRG00000047318	CLP1	100	99.529	ENSCAFG00000007815	CLP1	100	99.529	Canis_familiaris
ENSPTRG00000047318	CLP1	100	99.529	ENSCAFG00020000903	CLP1	100	99.529	Canis_lupus_dingo
ENSPTRG00000047318	CLP1	100	98.824	ENSCHIG00000023497	CLP1	100	98.824	Capra_hircus
ENSPTRG00000047318	CLP1	100	99.529	ENSTSYG00000006824	CLP1	99	99.529	Carlito_syrichta
ENSPTRG00000047318	CLP1	100	99.294	ENSCAPG00000009703	CLP1	100	99.294	Cavia_aperea
ENSPTRG00000047318	CLP1	98	99.519	ENSCPOG00000012554	CLP1	99	99.519	Cavia_porcellus
ENSPTRG00000047318	CLP1	100	99.529	ENSCCAG00000031957	CLP1	100	99.529	Cebus_capucinus
ENSPTRG00000047318	CLP1	100	100.000	ENSCATG00000044628	CLP1	100	100.000	Cercocebus_atys
ENSPTRG00000047318	CLP1	100	99.765	ENSCLAG00000004094	CLP1	100	99.765	Chinchilla_lanigera
ENSPTRG00000047318	CLP1	100	100.000	ENSCSAG00000005994	CLP1	100	100.000	Chlorocebus_sabaeus
ENSPTRG00000047318	CLP1	100	94.353	ENSCPBG00000016843	CLP1	100	94.353	Chrysemys_picta_bellii
ENSPTRG00000047318	CLP1	99	63.507	ENSCING00000003779	-	98	63.507	Ciona_intestinalis
ENSPTRG00000047318	CLP1	99	63.270	ENSCSAVG00000003437	-	99	63.270	Ciona_savignyi
ENSPTRG00000047318	CLP1	100	100.000	ENSCANG00000034335	CLP1	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000047318	CLP1	100	98.824	ENSCGRG00001002227	CLP1	100	98.824	Cricetulus_griseus_chok1gshd
ENSPTRG00000047318	CLP1	100	98.824	ENSCGRG00000004328	CLP1	100	98.824	Cricetulus_griseus_crigri
ENSPTRG00000047318	CLP1	99	74.942	ENSCSEG00000008614	clp1	98	74.942	Cynoglossus_semilaevis
ENSPTRG00000047318	CLP1	99	76.102	ENSCVAG00000020101	clp1	98	76.102	Cyprinodon_variegatus
ENSPTRG00000047318	CLP1	97	79.952	ENSDARG00000063663	clp1	95	79.952	Danio_rerio
ENSPTRG00000047318	CLP1	99	99.528	ENSDNOG00000042415	CLP1	90	99.528	Dasypus_novemcinctus
ENSPTRG00000047318	CLP1	100	99.294	ENSDORG00000014685	Clp1	100	99.294	Dipodomys_ordii
ENSPTRG00000047318	CLP1	96	56.553	FBgn0033842	cbc	97	56.553	Drosophila_melanogaster
ENSPTRG00000047318	CLP1	100	99.765	ENSETEG00000003009	CLP1	100	99.765	Echinops_telfairi
ENSPTRG00000047318	CLP1	97	72.155	ENSEBUG00000011648	clp1	97	72.155	Eptatretus_burgeri
ENSPTRG00000047318	CLP1	100	99.765	ENSEASG00005002093	CLP1	100	99.765	Equus_asinus_asinus
ENSPTRG00000047318	CLP1	100	99.765	ENSECAG00000011597	CLP1	100	99.765	Equus_caballus
ENSPTRG00000047318	CLP1	100	98.588	ENSEEUG00000012771	CLP1	100	98.588	Erinaceus_europaeus
ENSPTRG00000047318	CLP1	97	79.810	ENSELUG00000024048	clp1	95	79.810	Esox_lucius
ENSPTRG00000047318	CLP1	100	99.294	ENSFCAG00000006633	CLP1	100	99.294	Felis_catus
ENSPTRG00000047318	CLP1	100	92.706	ENSFALG00000011145	CLP1	100	92.706	Ficedula_albicollis
ENSPTRG00000047318	CLP1	100	99.765	ENSFDAG00000000234	CLP1	100	99.765	Fukomys_damarensis
ENSPTRG00000047318	CLP1	99	75.406	ENSFHEG00000014760	CLP1	98	75.406	Fundulus_heteroclitus
ENSPTRG00000047318	CLP1	97	80.144	ENSGMOG00000019340	clp1	95	80.144	Gadus_morhua
ENSPTRG00000047318	CLP1	100	93.412	ENSGALG00000007370	CLP1	100	93.412	Gallus_gallus
ENSPTRG00000047318	CLP1	99	75.870	ENSGAFG00000003020	clp1	99	75.870	Gambusia_affinis
ENSPTRG00000047318	CLP1	99	77.030	ENSGACG00000017832	clp1	98	77.030	Gasterosteus_aculeatus
ENSPTRG00000047318	CLP1	100	94.353	ENSGAGG00000013279	CLP1	100	94.353	Gopherus_agassizii
ENSPTRG00000047318	CLP1	100	100.000	ENSGGOG00000023006	CLP1	100	100.000	Gorilla_gorilla
ENSPTRG00000047318	CLP1	99	75.638	ENSHBUG00000010436	clp1	98	75.638	Haplochromis_burtoni
ENSPTRG00000047318	CLP1	100	99.765	ENSHGLG00000009914	CLP1	100	99.765	Heterocephalus_glaber_female
ENSPTRG00000047318	CLP1	100	99.765	ENSHGLG00100006105	CLP1	100	99.765	Heterocephalus_glaber_male
ENSPTRG00000047318	CLP1	99	77.011	ENSHCOG00000010072	clp1	99	77.011	Hippocampus_comes
ENSPTRG00000047318	CLP1	97	79.286	ENSIPUG00000016238	clp1	94	79.097	Ictalurus_punctatus
ENSPTRG00000047318	CLP1	100	99.765	ENSSTOG00000029257	CLP1	100	99.765	Ictidomys_tridecemlineatus
ENSPTRG00000047318	CLP1	100	99.059	ENSJJAG00000023691	Clp1	100	99.059	Jaculus_jaculus
ENSPTRG00000047318	CLP1	99	75.406	ENSKMAG00000011990	clp1	98	75.406	Kryptolebias_marmoratus
ENSPTRG00000047318	CLP1	99	76.798	ENSLBEG00000010201	clp1	98	76.798	Labrus_bergylta
ENSPTRG00000047318	CLP1	100	85.647	ENSLACG00000003160	CLP1	100	85.647	Latimeria_chalumnae
ENSPTRG00000047318	CLP1	73	76.708	ENSLOCG00000008074	clp1	100	77.640	Lepisosteus_oculatus
ENSPTRG00000047318	CLP1	100	99.529	ENSLAFG00000014907	CLP1	100	99.529	Loxodonta_africana
ENSPTRG00000047318	CLP1	100	100.000	ENSMFAG00000046074	CLP1	100	100.000	Macaca_fascicularis
ENSPTRG00000047318	CLP1	100	100.000	ENSMMUG00000038007	CLP1	99	100.000	Macaca_mulatta
ENSPTRG00000047318	CLP1	100	100.000	ENSMNEG00000000259	CLP1	100	100.000	Macaca_nemestrina
ENSPTRG00000047318	CLP1	100	100.000	ENSMLEG00000043556	CLP1	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000047318	CLP1	100	75.982	ENSMAMG00000002149	clp1	98	75.982	Mastacembelus_armatus
ENSPTRG00000047318	CLP1	99	75.638	ENSMZEG00005002850	clp1	98	75.638	Maylandia_zebra
ENSPTRG00000047318	CLP1	100	93.412	ENSMGAG00000009643	CLP1	100	93.412	Meleagris_gallopavo
ENSPTRG00000047318	CLP1	100	98.118	ENSMAUG00000016261	Clp1	100	98.118	Mesocricetus_auratus
ENSPTRG00000047318	CLP1	100	99.529	ENSMICG00000004895	CLP1	100	99.529	Microcebus_murinus
ENSPTRG00000047318	CLP1	100	99.059	ENSMOCG00000005498	Clp1	100	99.059	Microtus_ochrogaster
ENSPTRG00000047318	CLP1	98	78.538	ENSMMOG00000003229	clp1	96	78.538	Mola_mola
ENSPTRG00000047318	CLP1	100	97.412	ENSMODG00000024148	-	100	97.412	Monodelphis_domestica
ENSPTRG00000047318	CLP1	100	97.412	ENSMODG00000020107	-	100	97.412	Monodelphis_domestica
ENSPTRG00000047318	CLP1	99	75.172	ENSMALG00000014239	clp1	99	75.172	Monopterus_albus
ENSPTRG00000047318	CLP1	100	98.588	MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	Mus_caroli
ENSPTRG00000047318	CLP1	100	98.588	ENSMUSG00000027079	Clp1	100	98.588	Mus_musculus
ENSPTRG00000047318	CLP1	100	98.353	MGP_PahariEiJ_G0025177	Clp1	100	98.353	Mus_pahari
ENSPTRG00000047318	CLP1	100	98.588	MGP_SPRETEiJ_G0024646	Clp1	100	98.588	Mus_spretus
ENSPTRG00000047318	CLP1	100	99.529	ENSMPUG00000000268	CLP1	100	99.529	Mustela_putorius_furo
ENSPTRG00000047318	CLP1	100	99.059	ENSMLUG00000007904	CLP1	100	99.059	Myotis_lucifugus
ENSPTRG00000047318	CLP1	100	99.294	ENSNGAG00000006165	Clp1	100	99.294	Nannospalax_galili
ENSPTRG00000047318	CLP1	99	75.638	ENSNBRG00000005225	clp1	98	75.638	Neolamprologus_brichardi
ENSPTRG00000047318	CLP1	82	97.980	ENSNLEG00000012809	-	100	97.980	Nomascus_leucogenys
ENSPTRG00000047318	CLP1	100	97.412	ENSMEUG00000010949	CLP1	99	97.412	Notamacropus_eugenii
ENSPTRG00000047318	CLP1	70	99.329	ENSOPRG00000007329	CLP1	100	99.329	Ochotona_princeps
ENSPTRG00000047318	CLP1	100	99.765	ENSODEG00000011410	CLP1	100	99.765	Octodon_degus
ENSPTRG00000047318	CLP1	99	75.406	ENSONIG00000005089	clp1	98	75.406	Oreochromis_niloticus
ENSPTRG00000047318	CLP1	100	99.529	ENSOCUG00000007045	CLP1	100	99.529	Oryctolagus_cuniculus
ENSPTRG00000047318	CLP1	99	74.710	ENSORLG00000003647	clp1	98	74.710	Oryzias_latipes
ENSPTRG00000047318	CLP1	99	74.478	ENSORLG00020016676	clp1	98	74.478	Oryzias_latipes_hni
ENSPTRG00000047318	CLP1	99	74.710	ENSORLG00015019484	clp1	98	74.710	Oryzias_latipes_hsok
ENSPTRG00000047318	CLP1	99	75.406	ENSOMEG00000021303	clp1	98	75.406	Oryzias_melastigma
ENSPTRG00000047318	CLP1	100	99.294	ENSOGAG00000004508	CLP1	100	99.294	Otolemur_garnettii
ENSPTRG00000047318	CLP1	100	97.882	ENSOARG00000010145	CLP1	98	97.882	Ovis_aries
ENSPTRG00000047318	CLP1	100	100.000	ENSPPAG00000041519	CLP1	100	100.000	Pan_paniscus
ENSPTRG00000047318	CLP1	100	99.294	ENSPPRG00000006135	CLP1	100	99.294	Panthera_pardus
ENSPTRG00000047318	CLP1	100	99.294	ENSPTIG00000015866	CLP1	100	99.294	Panthera_tigris_altaica
ENSPTRG00000047318	CLP1	100	100.000	ENSPANG00000017078	CLP1	97	100.000	Papio_anubis
ENSPTRG00000047318	CLP1	97	80.630	ENSPKIG00000007697	clp1	94	80.630	Paramormyrops_kingsleyae
ENSPTRG00000047318	CLP1	95	92.289	ENSPSIG00000005468	CLP1	100	92.289	Pelodiscus_sinensis
ENSPTRG00000047318	CLP1	99	76.267	ENSPMGG00000012171	clp1	99	76.267	Periophthalmus_magnuspinnatus
ENSPTRG00000047318	CLP1	100	99.059	ENSPEMG00000011213	-	100	99.059	Peromyscus_maniculatus_bairdii
ENSPTRG00000047318	CLP1	100	76.291	ENSPMAG00000006707	clp1	100	76.291	Petromyzon_marinus
ENSPTRG00000047318	CLP1	100	96.941	ENSPCIG00000011899	CLP1	99	96.941	Phascolarctos_cinereus
ENSPTRG00000047318	CLP1	99	75.406	ENSPFOG00000008169	clp1	98	75.406	Poecilia_formosa
ENSPTRG00000047318	CLP1	99	75.406	ENSPLAG00000022388	clp1	99	75.406	Poecilia_latipinna
ENSPTRG00000047318	CLP1	99	75.406	ENSPMEG00000021088	clp1	99	75.406	Poecilia_mexicana
ENSPTRG00000047318	CLP1	99	75.638	ENSPREG00000017802	clp1	98	75.638	Poecilia_reticulata
ENSPTRG00000047318	CLP1	53	99.554	ENSPPYG00000003266	-	100	99.554	Pongo_abelii
ENSPTRG00000047318	CLP1	100	99.529	ENSPCOG00000000360	CLP1	98	99.529	Propithecus_coquereli
ENSPTRG00000047318	CLP1	100	99.529	ENSPVAG00000016270	CLP1	100	99.529	Pteropus_vampyrus
ENSPTRG00000047318	CLP1	99	75.638	ENSPNYG00000017274	clp1	97	75.638	Pundamilia_nyererei
ENSPTRG00000047318	CLP1	97	80.000	ENSPNAG00000026460	clp1	95	80.048	Pygocentrus_nattereri
ENSPTRG00000047318	CLP1	100	98.588	ENSRNOG00000007416	Clp1	100	98.588	Rattus_norvegicus
ENSPTRG00000047318	CLP1	100	100.000	ENSRBIG00000018191	CLP1	100	100.000	Rhinopithecus_bieti
ENSPTRG00000047318	CLP1	100	100.000	ENSRROG00000039265	CLP1	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000047318	CLP1	96	79.803	ENSSBOG00000010558	-	93	79.803	Saimiri_boliviensis_boliviensis
ENSPTRG00000047318	CLP1	100	100.000	ENSSBOG00000032517	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSPTRG00000047318	CLP1	100	97.647	ENSSHAG00000015695	CLP1	100	97.647	Sarcophilus_harrisii
ENSPTRG00000047318	CLP1	97	79.294	ENSSFOG00015000628	clp1	96	79.294	Scleropages_formosus
ENSPTRG00000047318	CLP1	99	75.638	ENSSMAG00000019423	clp1	97	75.638	Scophthalmus_maximus
ENSPTRG00000047318	CLP1	98	77.830	ENSSDUG00000014495	clp1	96	77.830	Seriola_dumerili
ENSPTRG00000047318	CLP1	98	77.594	ENSSLDG00000000937	clp1	96	77.594	Seriola_lalandi_dorsalis
ENSPTRG00000047318	CLP1	52	99.103	ENSSARG00000002459	CLP1	100	99.103	Sorex_araneus
ENSPTRG00000047318	CLP1	100	93.647	ENSSPUG00000016811	CLP1	100	93.647	Sphenodon_punctatus
ENSPTRG00000047318	CLP1	98	76.651	ENSSPAG00000016052	clp1	96	76.651	Stegastes_partitus
ENSPTRG00000047318	CLP1	100	99.529	ENSSSCG00000031442	CLP1	100	99.529	Sus_scrofa
ENSPTRG00000047318	CLP1	100	92.471	ENSTGUG00000007002	CLP1	100	92.471	Taeniopygia_guttata
ENSPTRG00000047318	CLP1	99	77.049	ENSTRUG00000012602	clp1	98	77.049	Takifugu_rubripes
ENSPTRG00000047318	CLP1	99	76.581	ENSTNIG00000013125	clp1	98	76.581	Tetraodon_nigroviridis
ENSPTRG00000047318	CLP1	100	98.353	ENSTBEG00000009975	CLP1	100	98.353	Tupaia_belangeri
ENSPTRG00000047318	CLP1	100	99.059	ENSTTRG00000002096	CLP1	100	99.059	Tursiops_truncatus
ENSPTRG00000047318	CLP1	100	99.529	ENSUAMG00000011388	CLP1	100	99.529	Ursus_americanus
ENSPTRG00000047318	CLP1	100	99.529	ENSUMAG00000018317	CLP1	100	99.529	Ursus_maritimus
ENSPTRG00000047318	CLP1	100	99.529	ENSVVUG00000017138	CLP1	97	99.529	Vulpes_vulpes
ENSPTRG00000047318	CLP1	98	77.938	ENSXETG00000007088	clp1	95	78.657	Xenopus_tropicalis
ENSPTRG00000047318	CLP1	99	75.638	ENSXCOG00000002287	clp1	98	75.638	Xiphophorus_couchianus
ENSPTRG00000047318	CLP1	99	75.638	ENSXMAG00000009783	clp1	98	75.638	Xiphophorus_maculatus