EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000047385 (Gene tree)
Gene ID: 740282
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 12170 bases
Position: chrY:16482089-16494258
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000081005	RBM1CTR	PF08081.11	2e-19	1	1
ENSPTRP00000070297	RBM1CTR	PF08081.11	2.2e-19	1	1
ENSPTRP00000081005	RRM_1	PF00076.22	2.4e-21	1	1
ENSPTRP00000070297	RRM_1	PF00076.22	2.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000104377	-	1389	-	ENSPTRP00000081005	462 (aa)	-	A0A2I3SVL2
ENSPTRT00000098176	-	1500	-	ENSPTRP00000070297	499 (aa)	-	A0A2I3S026

Gene Model

Click here to download ENSPTRG00000047385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000047385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000047385	-	100	90.430	ENSPTRG00000047951	-	100	90.430
ENSPTRG00000047385	-	86	53.704	ENSPTRG00000049750	-	97	54.167
ENSPTRG00000047385	-	100	96.328	ENSPTRG00000046311	-	100	96.328
ENSPTRG00000047385	-	100	91.577	ENSPTRG00000051395	-	100	91.577
ENSPTRG00000047385	-	100	90.430	ENSPTRG00000043157	-	100	90.430
ENSPTRG00000047385	-	100	90.625	ENSPTRG00000045105	-	100	90.625
ENSPTRG00000047385	-	100	88.086	ENSPTRG00000050914	-	100	88.086
ENSPTRG00000047385	-	100	94.805	ENSPTRG00000046270	-	100	94.805
ENSPTRG00000047385	-	69	52.308	ENSPTRG00000052216	-	95	50.575
ENSPTRG00000047385	-	100	94.600	ENSPTRG00000042791	-	100	94.600
ENSPTRG00000047385	-	85	49.091	ENSPTRG00000003312	RBMXL2	93	53.480
ENSPTRG00000047385	-	100	78.826	ENSPTRG00000049088	-	100	78.826
ENSPTRG00000047385	-	91	55.836	ENSPTRG00000052587	RBMX	92	80.556
ENSPTRG00000047385	-	58	54.613	ENSPTRG00000034071	-	98	52.786
ENSPTRG00000047385	-	100	97.000	ENSPTRG00000051022	-	100	97.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000047385	-	100	93.305	ENSG00000234414	RBMY1A1	100	93.305	Homo_sapiens
ENSPTRG00000047385	-	100	93.089	ENSG00000244395	RBMY1D	100	93.089	Homo_sapiens
ENSPTRG00000047385	-	100	92.873	ENSG00000242389	RBMY1E	100	92.873	Homo_sapiens
ENSPTRG00000047385	-	100	93.737	ENSG00000169800	RBMY1F	100	93.737	Homo_sapiens
ENSPTRG00000047385	-	100	93.400	ENSG00000226941	RBMY1J	100	93.400	Homo_sapiens
ENSPTRG00000047385	-	100	93.089	ENSG00000242875	RBMY1B	100	93.089	Homo_sapiens
ENSPTRG00000047385	-	83	84.475	ENSCSAG00000018304	-	100	66.000	Chlorocebus_sabaeus
ENSPTRG00000047385	-	99	53.388	ENSCSAG00000018310	-	100	53.924	Chlorocebus_sabaeus
ENSPTRG00000047385	-	91	42.230	ENSMUSG00000095948	Gm21708	87	42.230	Mus_musculus
ENSPTRG00000047385	-	89	42.657	ENSMUSG00000094511	Gm21693	87	42.657	Mus_musculus
ENSPTRG00000047385	-	92	38.978	ENSMUSG00000102053	Gm4064	87	47.577	Mus_musculus
ENSPTRG00000047385	-	91	42.230	ENSMUSG00000093987	Gm21704	87	42.230	Mus_musculus
ENSPTRG00000047385	-	91	42.230	ENSMUSG00000093918	Gm21677	87	42.230	Mus_musculus
ENSPTRG00000047385	-	91	42.230	ENSMUSG00000094658	Rbmy	87	42.230	Mus_musculus
ENSPTRG00000047385	-	91	43.243	ENSMUSG00000096520	Gm3376	87	43.243	Mus_musculus
ENSPTRG00000047385	-	91	42.568	ENSMUSG00000095852	Gm10256	87	42.568	Mus_musculus
ENSPTRG00000047385	-	91	42.568	ENSMUSG00000091987	Gm10352	87	42.568	Mus_musculus
ENSPTRG00000047385	-	85	45.139	ENSRNOG00000060963	Rbmy1j	84	49.425	Rattus_norvegicus
ENSPTRG00000047385	-	99	76.014	ENSRBIG00000007617	-	99	72.316	Rhinopithecus_bieti
ENSPTRG00000047385	-	90	63.197	ENSRBIG00000029066	-	100	63.197	Rhinopithecus_bieti
ENSPTRG00000047385	-	99	77.365	ENSRROG00000029740	-	99	70.933	Rhinopithecus_roxellana