EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000047717 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 245 bases
Position: chr1:183287219-183287463
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000082994	LSM	PF01423.22	2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000097347	-	225	-	ENSPTRP00000082994	74 (aa)	-	A0A2I3T174

Gene Model

Click here to download ENSPTRG00000047717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000047717's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000047717	-	91	74.667	ENSPTRG00000005317	-	87	74.359
ENSPTRG00000047717	-	74	44.444	ENSPTRG00000016488	LSM6	79	44.444
ENSPTRG00000047717	-	91	72.059	ENSPTRG00000043814	-	88	73.611

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000047717	-	91	74.667	ENSG00000139343	SNRPF	92	75.949	Homo_sapiens
ENSPTRG00000047717	-	89	72.973	ENSAPOG00000003377	snrpf	61	74.359	Acanthochromis_polyacanthus
ENSPTRG00000047717	-	92	63.158	ENSAMEG00000018718	-	92	64.557	Ailuropoda_melanoleuca
ENSPTRG00000047717	-	89	74.324	ENSAMEG00000002166	-	92	75.641	Ailuropoda_melanoleuca
ENSPTRG00000047717	-	88	72.603	ENSACIG00000013216	snrpf	91	74.026	Amphilophus_citrinellus
ENSPTRG00000047717	-	88	72.603	ENSAOCG00000015108	snrpf	91	74.026	Amphiprion_ocellaris
ENSPTRG00000047717	-	88	72.603	ENSAPEG00000022022	snrpf	91	74.026	Amphiprion_percula
ENSPTRG00000047717	-	88	72.603	ENSATEG00000022625	snrpf	83	74.026	Anabas_testudineus
ENSPTRG00000047717	-	89	72.973	ENSACAG00000014073	SNRPF	90	74.359	Anolis_carolinensis
ENSPTRG00000047717	-	91	53.731	ENSANAG00000025860	-	90	56.338	Aotus_nancymaae
ENSPTRG00000047717	-	85	67.606	ENSANAG00000020297	-	69	69.333	Aotus_nancymaae
ENSPTRG00000047717	-	91	74.667	ENSANAG00000032845	SNRPF	92	75.949	Aotus_nancymaae
ENSPTRG00000047717	-	88	72.603	ENSACLG00000016066	snrpf	91	74.026	Astatotilapia_calliptera
ENSPTRG00000047717	-	91	70.667	ENSAMXG00000007421	snrpf	92	72.152	Astyanax_mexicanus
ENSPTRG00000047717	-	91	74.667	ENSBTAG00000016271	SNRPF	92	75.949	Bos_taurus
ENSPTRG00000047717	-	100	69.512	ENSBTAG00000050012	-	100	69.512	Bos_taurus
ENSPTRG00000047717	-	91	53.333	WBGene00004918	snr-5	88	53.333	Caenorhabditis_elegans
ENSPTRG00000047717	-	91	74.667	ENSCJAG00000002705	-	92	75.949	Callithrix_jacchus
ENSPTRG00000047717	-	91	74.667	ENSCAFG00000006395	-	71	75.949	Canis_familiaris
ENSPTRG00000047717	-	85	69.014	ENSCAFG00000031151	-	90	71.429	Canis_familiaris
ENSPTRG00000047717	-	93	66.667	ENSCAFG00020013161	-	83	66.667	Canis_lupus_dingo
ENSPTRG00000047717	-	85	69.014	ENSCAFG00020010823	-	90	71.429	Canis_lupus_dingo
ENSPTRG00000047717	-	91	70.270	ENSTSYG00000036502	-	92	71.795	Carlito_syrichta
ENSPTRG00000047717	-	93	74.026	ENSTSYG00000031636	-	65	74.026	Carlito_syrichta
ENSPTRG00000047717	-	91	68.056	ENSTSYG00000030635	-	92	69.737	Carlito_syrichta
ENSPTRG00000047717	-	89	74.324	ENSCAPG00000007242	SNRPF	92	75.641	Cavia_aperea
ENSPTRG00000047717	-	91	74.667	ENSCPOG00000013898	SNRPF	92	75.949	Cavia_porcellus
ENSPTRG00000047717	-	91	74.667	ENSCCAG00000037378	-	92	75.949	Cebus_capucinus
ENSPTRG00000047717	-	88	73.973	ENSCCAG00000017356	-	91	75.641	Cebus_capucinus
ENSPTRG00000047717	-	96	70.886	ENSCCAG00000033627	-	62	70.886	Cebus_capucinus
ENSPTRG00000047717	-	91	74.667	ENSCLAG00000007200	SNRPF	92	75.949	Chinchilla_lanigera
ENSPTRG00000047717	-	91	74.667	ENSCSAG00000003602	-	64	75.949	Chlorocebus_sabaeus
ENSPTRG00000047717	-	76	70.312	ENSCHOG00000009392	SNRPF	100	70.312	Choloepus_hoffmanni
ENSPTRG00000047717	-	96	68.354	ENSCPBG00000001985	-	94	68.354	Chrysemys_picta_bellii
ENSPTRG00000047717	-	91	68.000	ENSCPBG00000006227	-	92	69.620	Chrysemys_picta_bellii
ENSPTRG00000047717	-	96	65.823	ENSCPBG00000026463	-	92	65.823	Chrysemys_picta_bellii
ENSPTRG00000047717	-	95	70.513	ENSCPBG00000024287	-	63	70.513	Chrysemys_picta_bellii
ENSPTRG00000047717	-	93	67.532	ENSCSAVG00000007498	-	88	67.532	Ciona_savignyi
ENSPTRG00000047717	-	91	74.667	ENSCGRG00001017100	-	92	75.949	Cricetulus_griseus_chok1gshd
ENSPTRG00000047717	-	91	70.270	ENSCGRG00001008965	-	61	71.795	Cricetulus_griseus_chok1gshd
ENSPTRG00000047717	-	91	74.667	ENSCGRG00000000336	-	92	75.949	Cricetulus_griseus_crigri
ENSPTRG00000047717	-	96	71.795	ENSCGRG00000018878	-	99	71.795	Cricetulus_griseus_crigri
ENSPTRG00000047717	-	91	72.000	ENSCSEG00000004748	snrpf	92	73.418	Cynoglossus_semilaevis
ENSPTRG00000047717	-	89	72.973	ENSCVAG00000000397	snrpf	62	74.359	Cyprinodon_variegatus
ENSPTRG00000047717	-	91	71.429	ENSDARG00000105037	snrpf	92	72.840	Danio_rerio
ENSPTRG00000047717	-	91	74.667	ENSDNOG00000043775	-	51	75.949	Dasypus_novemcinctus
ENSPTRG00000047717	-	91	73.333	ENSDNOG00000048989	-	71	74.684	Dasypus_novemcinctus
ENSPTRG00000047717	-	91	62.667	ENSDNOG00000049373	-	69	64.557	Dasypus_novemcinctus
ENSPTRG00000047717	-	86	66.667	ENSDORG00000025351	-	100	66.667	Dipodomys_ordii
ENSPTRG00000047717	-	69	72.881	ENSDORG00000029740	-	77	74.603	Dipodomys_ordii
ENSPTRG00000047717	-	95	58.974	FBgn0000426	SmF	89	58.974	Drosophila_melanogaster
ENSPTRG00000047717	-	91	74.667	ENSETEG00000001558	-	92	75.949	Echinops_telfairi
ENSPTRG00000047717	-	88	59.459	ENSEBUG00000001793	-	80	59.459	Eptatretus_burgeri
ENSPTRG00000047717	-	91	74.667	ENSECAG00000019817	SNRPF	64	75.949	Equus_caballus
ENSPTRG00000047717	-	89	74.324	ENSEEUG00000013509	SNRPF	92	75.641	Erinaceus_europaeus
ENSPTRG00000047717	-	91	70.667	ENSELUG00000003121	RUXF	92	72.152	Esox_lucius
ENSPTRG00000047717	-	91	69.333	ENSELUG00000007737	RUXF	91	70.886	Esox_lucius
ENSPTRG00000047717	-	91	62.667	ENSFCAG00000021942	-	91	64.557	Felis_catus
ENSPTRG00000047717	-	91	74.667	ENSFCAG00000029966	-	92	75.949	Felis_catus
ENSPTRG00000047717	-	91	61.333	ENSFCAG00000031148	-	72	63.291	Felis_catus
ENSPTRG00000047717	-	89	74.324	ENSFALG00000010799	SNRPF	91	75.641	Ficedula_albicollis
ENSPTRG00000047717	-	91	74.667	ENSFDAG00000002831	-	92	75.949	Fukomys_damarensis
ENSPTRG00000047717	-	89	72.973	ENSFHEG00000003240	snrpf	68	74.359	Fundulus_heteroclitus
ENSPTRG00000047717	-	89	72.973	ENSGMOG00000007741	snrpf	92	74.359	Gadus_morhua
ENSPTRG00000047717	-	91	74.667	ENSGALG00000011409	SNRPF	92	75.949	Gallus_gallus
ENSPTRG00000047717	-	88	72.603	ENSGAFG00000016187	snrpf	89	74.026	Gambusia_affinis
ENSPTRG00000047717	-	89	71.622	ENSGACG00000020055	snrpf	92	73.077	Gasterosteus_aculeatus
ENSPTRG00000047717	-	62	78.723	ENSGAGG00000011163	-	82	78.723	Gopherus_agassizii
ENSPTRG00000047717	-	85	67.606	ENSGAGG00000022991	-	84	67.606	Gopherus_agassizii
ENSPTRG00000047717	-	80	71.642	ENSGAGG00000012945	-	72	69.620	Gopherus_agassizii
ENSPTRG00000047717	-	73	66.129	ENSGAGG00000020974	-	52	66.129	Gopherus_agassizii
ENSPTRG00000047717	-	82	60.870	ENSGAGG00000014132	-	95	56.962	Gopherus_agassizii
ENSPTRG00000047717	-	91	72.059	ENSGGOG00000039936	-	88	73.611	Gorilla_gorilla
ENSPTRG00000047717	-	91	74.667	ENSGGOG00000001127	-	92	75.949	Gorilla_gorilla
ENSPTRG00000047717	-	100	93.243	ENSGGOG00000039564	-	100	93.243	Gorilla_gorilla
ENSPTRG00000047717	-	91	74.667	ENSHGLG00000021172	-	92	75.949	Heterocephalus_glaber_female
ENSPTRG00000047717	-	91	74.667	ENSHGLG00000009108	SNRPF	92	75.949	Heterocephalus_glaber_female
ENSPTRG00000047717	-	89	74.324	ENSHGLG00100008103	-	92	75.641	Heterocephalus_glaber_male
ENSPTRG00000047717	-	91	74.667	ENSHGLG00100019596	-	92	75.949	Heterocephalus_glaber_male
ENSPTRG00000047717	-	74	60.000	ENSHCOG00000018663	snrpf	55	60.000	Hippocampus_comes
ENSPTRG00000047717	-	91	73.333	ENSIPUG00000018994	snrpf	92	74.684	Ictalurus_punctatus
ENSPTRG00000047717	-	91	74.667	ENSSTOG00000010434	-	92	75.949	Ictidomys_tridecemlineatus
ENSPTRG00000047717	-	96	68.354	ENSJJAG00000004558	-	94	68.354	Jaculus_jaculus
ENSPTRG00000047717	-	91	74.667	ENSJJAG00000011272	-	92	75.949	Jaculus_jaculus
ENSPTRG00000047717	-	64	81.250	ENSJJAG00000004828	-	74	81.250	Jaculus_jaculus
ENSPTRG00000047717	-	96	64.557	ENSJJAG00000010502	-	94	64.557	Jaculus_jaculus
ENSPTRG00000047717	-	91	72.000	ENSKMAG00000013566	snrpf	92	73.418	Kryptolebias_marmoratus
ENSPTRG00000047717	-	91	74.667	ENSLBEG00000008800	snrpf	92	75.949	Labrus_bergylta
ENSPTRG00000047717	-	91	73.333	ENSLACG00000002456	-	68	74.684	Latimeria_chalumnae
ENSPTRG00000047717	-	91	70.667	ENSLOCG00000015744	snrpf	92	72.152	Lepisosteus_oculatus
ENSPTRG00000047717	-	89	74.324	ENSLAFG00000017426	SNRPF	91	75.641	Loxodonta_africana
ENSPTRG00000047717	-	88	73.973	ENSMAMG00000016593	snrpf	91	75.325	Mastacembelus_armatus
ENSPTRG00000047717	-	88	72.603	ENSMZEG00005014701	snrpf	91	74.026	Maylandia_zebra
ENSPTRG00000047717	-	91	72.000	ENSMGAG00000011453	-	71	73.418	Meleagris_gallopavo
ENSPTRG00000047717	-	74	74.603	ENSMAUG00000016909	-	91	76.119	Mesocricetus_auratus
ENSPTRG00000047717	-	91	69.333	ENSMAUG00000008799	-	92	70.886	Mesocricetus_auratus
ENSPTRG00000047717	-	74	74.603	ENSMAUG00000019737	-	91	76.119	Mesocricetus_auratus
ENSPTRG00000047717	-	91	64.706	ENSMAUG00000010289	-	89	64.706	Mesocricetus_auratus
ENSPTRG00000047717	-	91	74.667	ENSMICG00000012153	-	92	75.949	Microcebus_murinus
ENSPTRG00000047717	-	91	73.333	ENSMICG00000030494	-	63	74.684	Microcebus_murinus
ENSPTRG00000047717	-	78	67.692	ENSMOCG00000020220	-	94	68.056	Microtus_ochrogaster
ENSPTRG00000047717	-	91	67.568	ENSMOCG00000022166	-	90	67.901	Microtus_ochrogaster
ENSPTRG00000047717	-	91	74.667	ENSMOCG00000020437	Snrpf	92	75.949	Microtus_ochrogaster
ENSPTRG00000047717	-	89	71.622	ENSMMOG00000007127	snrpf	92	73.077	Mola_mola
ENSPTRG00000047717	-	91	74.667	ENSMODG00000008091	SNRPF	69	75.949	Monodelphis_domestica
ENSPTRG00000047717	-	88	72.603	ENSMALG00000012328	snrpf	91	74.026	Monopterus_albus
ENSPTRG00000047717	-	91	74.667	MGP_CAROLIEiJ_G0015735	-	92	75.949	Mus_caroli
ENSPTRG00000047717	-	91	74.667	ENSMUSG00000020018	Snrpf	92	75.949	Mus_musculus
ENSPTRG00000047717	-	91	74.667	MGP_PahariEiJ_G0031350	Snrpf	92	75.949	Mus_pahari
ENSPTRG00000047717	-	91	74.667	MGP_SPRETEiJ_G0016553	Snrpf	92	75.949	Mus_spretus
ENSPTRG00000047717	-	91	74.667	ENSMPUG00000007176	-	71	75.949	Mustela_putorius_furo
ENSPTRG00000047717	-	91	74.667	ENSMLUG00000027932	-	75	75.949	Myotis_lucifugus
ENSPTRG00000047717	-	89	74.324	ENSMLUG00000013577	-	92	75.641	Myotis_lucifugus
ENSPTRG00000047717	-	91	74.667	ENSMLUG00000029201	-	75	75.949	Myotis_lucifugus
ENSPTRG00000047717	-	91	60.000	ENSMLUG00000026269	-	75	62.025	Myotis_lucifugus
ENSPTRG00000047717	-	91	74.667	ENSMLUG00000026149	-	75	75.949	Myotis_lucifugus
ENSPTRG00000047717	-	91	74.667	ENSNGAG00000024292	-	92	75.949	Nannospalax_galili
ENSPTRG00000047717	-	74	68.254	ENSNGAG00000005851	-	74	68.254	Nannospalax_galili
ENSPTRG00000047717	-	89	72.973	ENSNBRG00000011682	snrpf	80	74.359	Neolamprologus_brichardi
ENSPTRG00000047717	-	89	54.054	ENSMEUG00000000671	SNRPF	92	56.410	Notamacropus_eugenii
ENSPTRG00000047717	-	91	74.667	ENSODEG00000010328	-	92	75.949	Octodon_degus
ENSPTRG00000047717	-	91	73.333	ENSOCUG00000010925	SNRPF	70	74.684	Oryctolagus_cuniculus
ENSPTRG00000047717	-	89	70.270	ENSORLG00020008216	snrpf	92	71.795	Oryzias_latipes_hni
ENSPTRG00000047717	-	89	70.270	ENSORLG00015007418	snrpf	92	71.795	Oryzias_latipes_hsok
ENSPTRG00000047717	-	88	71.233	ENSOMEG00000003018	snrpf	91	72.727	Oryzias_melastigma
ENSPTRG00000047717	-	91	74.667	ENSOGAG00000030323	-	92	75.949	Otolemur_garnettii
ENSPTRG00000047717	-	91	74.667	ENSOARG00000011853	-	69	75.949	Ovis_aries
ENSPTRG00000047717	-	100	97.297	ENSPPAG00000037479	-	100	97.297	Pan_paniscus
ENSPTRG00000047717	-	91	72.059	ENSPPAG00000037544	-	88	73.611	Pan_paniscus
ENSPTRG00000047717	-	96	63.291	ENSPPRG00000007449	-	81	63.291	Panthera_pardus
ENSPTRG00000047717	-	91	74.667	ENSPPRG00000005875	-	92	75.949	Panthera_pardus
ENSPTRG00000047717	-	91	62.667	ENSPTIG00000005117	-	94	64.557	Panthera_tigris_altaica
ENSPTRG00000047717	-	91	74.667	ENSPTIG00000007520	SNRPF	92	75.949	Panthera_tigris_altaica
ENSPTRG00000047717	-	89	72.973	ENSPKIG00000014784	snrpf	86	74.359	Paramormyrops_kingsleyae
ENSPTRG00000047717	-	89	74.324	ENSPSIG00000016462	SNRPF	91	75.641	Pelodiscus_sinensis
ENSPTRG00000047717	-	89	71.622	ENSPMGG00000023548	snrpf	92	73.077	Periophthalmus_magnuspinnatus
ENSPTRG00000047717	-	91	74.667	ENSPEMG00000023326	Snrpf	92	75.949	Peromyscus_maniculatus_bairdii
ENSPTRG00000047717	-	88	72.603	ENSPLAG00000023932	snrpf	91	74.026	Poecilia_latipinna
ENSPTRG00000047717	-	88	72.603	ENSPMEG00000003377	snrpf	91	74.026	Poecilia_mexicana
ENSPTRG00000047717	-	88	72.603	ENSPREG00000022635	snrpf	89	74.026	Poecilia_reticulata
ENSPTRG00000047717	-	91	74.667	ENSPPYG00000004847	-	92	75.949	Pongo_abelii
ENSPTRG00000047717	-	91	74.667	ENSPCOG00000023833	-	92	75.949	Propithecus_coquereli
ENSPTRG00000047717	-	91	74.667	ENSPVAG00000009036	SNRPF	92	75.949	Pteropus_vampyrus
ENSPTRG00000047717	-	88	72.603	ENSPNYG00000021712	snrpf	91	74.026	Pundamilia_nyererei
ENSPTRG00000047717	-	88	71.233	ENSPNAG00000019117	snrpf	91	72.727	Pygocentrus_nattereri
ENSPTRG00000047717	-	91	74.667	ENSRNOG00000005556	Snrpf	92	75.949	Rattus_norvegicus
ENSPTRG00000047717	-	91	73.333	ENSRBIG00000030414	-	92	74.684	Rhinopithecus_bieti
ENSPTRG00000047717	-	91	73.333	ENSRROG00000021975	-	92	74.684	Rhinopithecus_roxellana
ENSPTRG00000047717	-	84	50.704	YPR182W	SMX3	83	50.704	Saccharomyces_cerevisiae
ENSPTRG00000047717	-	91	62.821	ENSSBOG00000027638	-	92	64.634	Saimiri_boliviensis_boliviensis
ENSPTRG00000047717	-	91	74.667	ENSSBOG00000012868	-	92	74.684	Saimiri_boliviensis_boliviensis
ENSPTRG00000047717	-	91	74.667	ENSSBOG00000036179	-	92	75.949	Saimiri_boliviensis_boliviensis
ENSPTRG00000047717	-	91	65.672	ENSSBOG00000032297	-	91	66.197	Saimiri_boliviensis_boliviensis
ENSPTRG00000047717	-	89	74.324	ENSSHAG00000012294	SNRPF	70	75.641	Sarcophilus_harrisii
ENSPTRG00000047717	-	76	68.750	ENSSFOG00015021523	snrpf	96	68.750	Scleropages_formosus
ENSPTRG00000047717	-	91	70.667	ENSSMAG00000005533	snrpf	91	72.152	Scophthalmus_maximus
ENSPTRG00000047717	-	77	69.231	ENSSDUG00000016283	snrpf	77	69.231	Seriola_dumerili
ENSPTRG00000047717	-	95	53.846	ENSSLDG00000003885	-	95	53.846	Seriola_lalandi_dorsalis
ENSPTRG00000047717	-	91	72.000	ENSSLDG00000005119	snrpf	92	73.418	Seriola_lalandi_dorsalis
ENSPTRG00000047717	-	88	73.973	ENSSPUG00000014590	-	91	75.325	Sphenodon_punctatus
ENSPTRG00000047717	-	89	72.973	ENSSPAG00000003283	snrpf	89	74.359	Stegastes_partitus
ENSPTRG00000047717	-	91	74.667	ENSSSCG00000000895	SNRPF	92	75.949	Sus_scrofa
ENSPTRG00000047717	-	68	74.138	ENSTRUG00000014956	snrpf	90	75.806	Takifugu_rubripes
ENSPTRG00000047717	-	91	74.667	ENSTNIG00000012672	snrpf	92	75.949	Tetraodon_nigroviridis
ENSPTRG00000047717	-	91	54.667	ENSTTRG00000006070	SNRPF	92	56.962	Tursiops_truncatus
ENSPTRG00000047717	-	91	74.667	ENSUAMG00000008176	-	92	75.949	Ursus_americanus
ENSPTRG00000047717	-	100	65.854	ENSUAMG00000001101	-	96	65.854	Ursus_americanus
ENSPTRG00000047717	-	91	66.667	ENSUMAG00000006177	-	96	65.854	Ursus_maritimus
ENSPTRG00000047717	-	91	74.667	ENSUMAG00000003528	-	92	75.949	Ursus_maritimus
ENSPTRG00000047717	-	91	74.667	ENSVPAG00000008712	-	92	75.949	Vicugna_pacos
ENSPTRG00000047717	-	95	69.231	ENSVVUG00000023821	-	100	69.231	Vulpes_vulpes
ENSPTRG00000047717	-	89	57.895	ENSXETG00000021630	snrpf	92	60.000	Xenopus_tropicalis
ENSPTRG00000047717	-	88	72.603	ENSXCOG00000013860	snrpf	89	74.026	Xiphophorus_couchianus
ENSPTRG00000047717	-	88	72.603	ENSXMAG00000015448	snrpf	91	74.026	Xiphophorus_maculatus