EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000047826 (Gene tree)
Gene ID: 458852
Gene Symbol: TNRC6B
Alias: -
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 198864 bases
Position: chr22:26741262-26940125
Accession: 458852
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000067602	Ago_hook	PF10427.9	1e-20	1	1
ENSPTRP00000081774	Ago_hook	PF10427.9	1.1e-19	1	1
ENSPTRP00000072505	Ago_hook	PF10427.9	1.3e-19	1	1
ENSPTRP00000086268	Ago_hook	PF10427.9	4.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000110211	TNRC6B-201	3087	XM_016939212	ENSPTRP00000067602	1028 (aa)	XP_016794701	A0A2J8LNE0
ENSPTRT00000103287	TNRC6B-202	7248	XM_016939213	ENSPTRP00000081774	1832 (aa)	XP_016794702	A0A2I3SXP3
ENSPTRT00000110646	TNRC6B-203	5382	XM_016939217	ENSPTRP00000086268	1722 (aa)	XP_016794706	A0A2I3TAL6
ENSPTRT00000089833	TNRC6B-204	5247	XM_024352850	ENSPTRP00000072505	1748 (aa)	XP_024208618	A0A2I3S6Q3

Gene Model

Click here to download ENSPTRG00000047826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000047826's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000047826	TNRC6B	99	36.125	ENSPTRG00000007898	TNRC6A	98	38.641
ENSPTRG00000047826	TNRC6B	89	53.012	ENSPTRG00000009699	TNRC6C	99	38.023

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000047826	TNRC6B	100	99.673	ENSG00000100354	TNRC6B	100	100.000	Homo_sapiens
ENSPTRG00000047826	TNRC6B	99	97.434	ENSAMEG00000011025	TNRC6B	99	97.434	Ailuropoda_melanoleuca
ENSPTRG00000047826	TNRC6B	98	88.582	ENSAPLG00000009347	TNRC6B	100	88.817	Anas_platyrhynchos
ENSPTRG00000047826	TNRC6B	95	85.917	ENSACAG00000007281	TNRC6B	98	73.886	Anolis_carolinensis
ENSPTRG00000047826	TNRC6B	100	99.514	ENSANAG00000035042	TNRC6B	100	99.514	Aotus_nancymaae
ENSPTRG00000047826	TNRC6B	89	63.953	ENSAMXG00000008707	tnrc6b	82	47.240	Astyanax_mexicanus
ENSPTRG00000047826	TNRC6B	100	96.005	ENSBTAG00000021076	TNRC6B	99	96.002	Bos_taurus
ENSPTRG00000047826	TNRC6B	100	99.223	ENSCJAG00000002732	TNRC6B	100	100.000	Callithrix_jacchus
ENSPTRG00000047826	TNRC6B	99	97.277	ENSCAFG00000001255	TNRC6B	100	97.277	Canis_familiaris
ENSPTRG00000047826	TNRC6B	99	97.059	ENSCAFG00020002189	TNRC6B	99	95.263	Canis_lupus_dingo
ENSPTRG00000047826	TNRC6B	98	98.193	ENSCHIG00000003491	TNRC6B	99	95.657	Capra_hircus
ENSPTRG00000047826	TNRC6B	100	98.346	ENSTSYG00000011836	TNRC6B	100	98.346	Carlito_syrichta
ENSPTRG00000047826	TNRC6B	100	96.475	ENSCPOG00000005705	TNRC6B	98	96.935	Cavia_porcellus
ENSPTRG00000047826	TNRC6B	100	98.144	ENSCCAG00000019912	TNRC6B	100	98.144	Cebus_capucinus
ENSPTRG00000047826	TNRC6B	100	98.909	ENSCATG00000029291	TNRC6B	100	98.909	Cercocebus_atys
ENSPTRG00000047826	TNRC6B	100	96.820	ENSCLAG00000016942	TNRC6B	96	97.248	Chinchilla_lanigera
ENSPTRG00000047826	TNRC6B	99	94.966	ENSCSAG00000006021	TNRC6B	98	95.023	Chlorocebus_sabaeus
ENSPTRG00000047826	TNRC6B	61	98.901	ENSCHOG00000010004	-	62	98.901	Choloepus_hoffmanni
ENSPTRG00000047826	TNRC6B	92	87.522	ENSCPBG00000022932	TNRC6B	99	87.580	Chrysemys_picta_bellii
ENSPTRG00000047826	TNRC6B	100	99.246	ENSCANG00000030776	TNRC6B	100	99.246	Colobus_angolensis_palliatus
ENSPTRG00000047826	TNRC6B	96	94.899	ENSCGRG00001020166	Tnrc6b	96	94.721	Cricetulus_griseus_chok1gshd
ENSPTRG00000047826	TNRC6B	100	95.401	ENSCGRG00000016696	Tnrc6b	98	94.809	Cricetulus_griseus_crigri
ENSPTRG00000047826	TNRC6B	100	97.518	ENSDNOG00000012744	TNRC6B	99	96.292	Dasypus_novemcinctus
ENSPTRG00000047826	TNRC6B	100	97.503	ENSDORG00000003386	Tnrc6b	97	96.625	Dipodomys_ordii
ENSPTRG00000047826	TNRC6B	99	88.273	ENSETEG00000006570	TNRC6B	99	88.565	Echinops_telfairi
ENSPTRG00000047826	TNRC6B	99	97.409	ENSEASG00005005306	TNRC6B	98	97.303	Equus_asinus_asinus
ENSPTRG00000047826	TNRC6B	100	97.762	ENSECAG00000009759	TNRC6B	100	99.500	Equus_caballus
ENSPTRG00000047826	TNRC6B	75	97.436	ENSEEUG00000008690	-	59	97.436	Erinaceus_europaeus
ENSPTRG00000047826	TNRC6B	52	63.907	ENSELUG00000019468	-	71	63.816	Esox_lucius
ENSPTRG00000047826	TNRC6B	100	97.304	ENSFCAG00000004791	TNRC6B	100	97.174	Felis_catus
ENSPTRG00000047826	TNRC6B	97	89.027	ENSFALG00000012195	TNRC6B	100	89.027	Ficedula_albicollis
ENSPTRG00000047826	TNRC6B	100	96.580	ENSFDAG00000021368	TNRC6B	96	97.020	Fukomys_damarensis
ENSPTRG00000047826	TNRC6B	99	89.495	ENSGALG00000012050	TNRC6B	96	89.552	Gallus_gallus
ENSPTRG00000047826	TNRC6B	99	89.295	ENSGAGG00000025188	TNRC6B	98	89.241	Gopherus_agassizii
ENSPTRG00000047826	TNRC6B	100	99.618	ENSGGOG00000008444	TNRC6B	100	99.618	Gorilla_gorilla
ENSPTRG00000047826	TNRC6B	100	96.958	ENSHGLG00000009306	TNRC6B	100	96.958	Heterocephalus_glaber_female
ENSPTRG00000047826	TNRC6B	100	97.038	ENSHGLG00100018108	TNRC6B	97	97.125	Heterocephalus_glaber_male
ENSPTRG00000047826	TNRC6B	89	57.522	ENSIPUG00000001515	tnrc6b	95	50.276	Ictalurus_punctatus
ENSPTRG00000047826	TNRC6B	100	97.393	ENSSTOG00000008927	TNRC6B	96	96.796	Ictidomys_tridecemlineatus
ENSPTRG00000047826	TNRC6B	100	95.986	ENSJJAG00000015779	Tnrc6b	96	95.089	Jaculus_jaculus
ENSPTRG00000047826	TNRC6B	96	78.808	ENSLACG00000000628	-	99	61.217	Latimeria_chalumnae
ENSPTRG00000047826	TNRC6B	82	96.327	ENSLAFG00000014473	TNRC6B	100	96.720	Loxodonta_africana
ENSPTRG00000047826	TNRC6B	100	99.371	ENSMFAG00000003862	TNRC6B	100	99.018	Macaca_fascicularis
ENSPTRG00000047826	TNRC6B	100	99.611	ENSMMUG00000021345	TNRC6B	100	99.611	Macaca_mulatta
ENSPTRG00000047826	TNRC6B	99	99.416	ENSMNEG00000042745	TNRC6B	100	99.416	Macaca_nemestrina
ENSPTRG00000047826	TNRC6B	100	99.611	ENSMLEG00000041780	TNRC6B	100	99.611	Mandrillus_leucophaeus
ENSPTRG00000047826	TNRC6B	99	89.597	ENSMGAG00000012333	TNRC6B	99	89.491	Meleagris_gallopavo
ENSPTRG00000047826	TNRC6B	100	95.401	ENSMAUG00000016123	Tnrc6b	97	94.752	Mesocricetus_auratus
ENSPTRG00000047826	TNRC6B	100	98.159	ENSMICG00000014056	TNRC6B	100	98.159	Microcebus_murinus
ENSPTRG00000047826	TNRC6B	96	96.000	ENSMOCG00000020334	Tnrc6b	97	96.000	Microtus_ochrogaster
ENSPTRG00000047826	TNRC6B	65	80.645	ENSMMOG00000002799	si:dkey-217f16.6	59	69.388	Mola_mola
ENSPTRG00000047826	TNRC6B	100	95.873	MGP_CAROLIEiJ_G0020043	Tnrc6b	96	94.866	Mus_caroli
ENSPTRG00000047826	TNRC6B	100	95.991	ENSMUSG00000047888	Tnrc6b	99	95.643	Mus_musculus
ENSPTRG00000047826	TNRC6B	100	94.929	MGP_PahariEiJ_G0020045	Tnrc6b	96	94.776	Mus_pahari
ENSPTRG00000047826	TNRC6B	100	96.108	MGP_SPRETEiJ_G0020941	Tnrc6b	98	95.972	Mus_spretus
ENSPTRG00000047826	TNRC6B	98	98.092	ENSMPUG00000016442	TNRC6B	100	93.351	Mustela_putorius_furo
ENSPTRG00000047826	TNRC6B	99	96.942	ENSMLUG00000008765	TNRC6B	99	96.942	Myotis_lucifugus
ENSPTRG00000047826	TNRC6B	100	95.652	ENSNGAG00000021294	Tnrc6b	96	94.986	Nannospalax_galili
ENSPTRG00000047826	TNRC6B	100	99.806	ENSNLEG00000015311	TNRC6B	100	99.806	Nomascus_leucogenys
ENSPTRG00000047826	TNRC6B	99	91.018	ENSOPRG00000012054	TNRC6B	88	94.537	Ochotona_princeps
ENSPTRG00000047826	TNRC6B	100	96.706	ENSODEG00000013146	TNRC6B	96	96.864	Octodon_degus
ENSPTRG00000047826	TNRC6B	89	68.889	ENSONIG00000019679	-	97	48.322	Oreochromis_niloticus
ENSPTRG00000047826	TNRC6B	100	97.628	ENSOCUG00000016128	TNRC6B	96	96.165	Oryctolagus_cuniculus
ENSPTRG00000047826	TNRC6B	100	97.659	ENSOGAG00000011096	TNRC6B	100	97.659	Otolemur_garnettii
ENSPTRG00000047826	TNRC6B	100	96.014	ENSOARG00000017238	TNRC6B	96	95.170	Ovis_aries
ENSPTRG00000047826	TNRC6B	100	99.806	ENSPPAG00000028514	TNRC6B	100	99.806	Pan_paniscus
ENSPTRG00000047826	TNRC6B	100	98.251	ENSPPRG00000017741	TNRC6B	100	98.251	Panthera_pardus
ENSPTRG00000047826	TNRC6B	99	92.771	ENSPTIG00000022064	TNRC6B	98	94.314	Panthera_tigris_altaica
ENSPTRG00000047826	TNRC6B	98	93.954	ENSPANG00000009271	TNRC6B	98	98.246	Papio_anubis
ENSPTRG00000047826	TNRC6B	99	88.497	ENSPSIG00000005318	TNRC6B	98	88.554	Pelodiscus_sinensis
ENSPTRG00000047826	TNRC6B	100	94.595	ENSPEMG00000011403	Tnrc6b	96	94.362	Peromyscus_maniculatus_bairdii
ENSPTRG00000047826	TNRC6B	99	87.486	ENSPCIG00000020347	TNRC6B	99	87.817	Phascolarctos_cinereus
ENSPTRG00000047826	TNRC6B	92	56.667	ENSPFOG00000006033	-	96	43.823	Poecilia_formosa
ENSPTRG00000047826	TNRC6B	87	69.863	ENSPLAG00000001418	-	98	39.115	Poecilia_latipinna
ENSPTRG00000047826	TNRC6B	100	99.304	ENSPPYG00000011849	TNRC6B	100	99.304	Pongo_abelii
ENSPTRG00000047826	TNRC6B	95	87.690	ENSPCAG00000008739	TNRC6B	75	91.717	Procavia_capensis
ENSPTRG00000047826	TNRC6B	100	98.547	ENSPCOG00000020790	TNRC6B	100	98.547	Propithecus_coquereli
ENSPTRG00000047826	TNRC6B	94	95.916	ENSPVAG00000004975	TNRC6B	92	95.530	Pteropus_vampyrus
ENSPTRG00000047826	TNRC6B	82	60.714	ENSPNAG00000011713	tnrc6b	72	46.701	Pygocentrus_nattereri
ENSPTRG00000047826	TNRC6B	100	94.632	ENSRNOG00000024907	Tnrc6b	96	94.265	Rattus_norvegicus
ENSPTRG00000047826	TNRC6B	100	99.291	ENSRBIG00000035576	TNRC6B	100	99.408	Rhinopithecus_bieti
ENSPTRG00000047826	TNRC6B	100	99.320	ENSRROG00000031135	TNRC6B	100	99.320	Rhinopithecus_roxellana
ENSPTRG00000047826	TNRC6B	99	99.182	ENSSBOG00000029743	TNRC6B	100	99.182	Saimiri_boliviensis_boliviensis
ENSPTRG00000047826	TNRC6B	99	87.705	ENSSHAG00000009692	TNRC6B	99	87.760	Sarcophilus_harrisii
ENSPTRG00000047826	TNRC6B	74	86.057	ENSSARG00000007971	-	70	88.636	Sorex_araneus
ENSPTRG00000047826	TNRC6B	92	88.532	ENSSPUG00000010801	TNRC6B	100	88.414	Sphenodon_punctatus
ENSPTRG00000047826	TNRC6B	100	97.630	ENSSSCG00000000078	TNRC6B	99	98.161	Sus_scrofa
ENSPTRG00000047826	TNRC6B	93	88.334	ENSTGUG00000010138	-	99	88.272	Taeniopygia_guttata
ENSPTRG00000047826	TNRC6B	99	94.681	ENSTTRG00000011465	TNRC6B	95	98.826	Tursiops_truncatus
ENSPTRG00000047826	TNRC6B	99	97.252	ENSUAMG00000007174	TNRC6B	98	97.331	Ursus_americanus
ENSPTRG00000047826	TNRC6B	99	96.913	ENSUMAG00000014336	TNRC6B	100	97.280	Ursus_maritimus
ENSPTRG00000047826	TNRC6B	82	93.617	ENSVPAG00000001467	TNRC6B	72	91.066	Vicugna_pacos
ENSPTRG00000047826	TNRC6B	100	97.412	ENSVVUG00000007064	TNRC6B	98	97.331	Vulpes_vulpes
ENSPTRG00000047826	TNRC6B	72	49.872	ENSXCOG00000003042	-	98	38.765	Xiphophorus_couchianus