EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000048100 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 4768 bases
Position: chr6:162540559-162545326
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000090030	SRP72	PF08492.12	2.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000085320	-	1824	-	ENSPTRP00000090030	607 (aa)	-	A0A2I3TLB9

Gene Model

Click here to download ENSPTRG00000048100's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000048100's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000048100	-	99	72.701	ENSPTRG00000048466	-	100	72.263
ENSPTRG00000048100	-	76	61.822	ENSPTRG00000043609	-	94	60.357

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000048100	-	95	73.893	ENSG00000174780	SRP72	99	72.851	Homo_sapiens
ENSPTRG00000048100	-	94	50.539	ENSAPOG00000019438	srp72	97	50.153	Acanthochromis_polyacanthus
ENSPTRG00000048100	-	93	74.028	ENSAMEG00000008469	SRP72	98	72.273	Ailuropoda_melanoleuca
ENSPTRG00000048100	-	95	56.621	ENSACIG00000000488	srp72	99	56.344	Amphilophus_citrinellus
ENSPTRG00000048100	-	95	57.622	ENSAOCG00000011256	srp72	99	57.186	Amphiprion_ocellaris
ENSPTRG00000048100	-	95	57.585	ENSAPEG00000001512	srp72	99	57.143	Amphiprion_percula
ENSPTRG00000048100	-	88	56.678	ENSATEG00000006781	srp72	99	56.678	Anabas_testudineus
ENSPTRG00000048100	-	95	64.319	ENSAPLG00000008751	SRP72	98	63.389	Anas_platyrhynchos
ENSPTRG00000048100	-	94	64.760	ENSACAG00000002381	SRP72	96	63.817	Anolis_carolinensis
ENSPTRG00000048100	-	99	71.533	ENSANAG00000020836	-	100	71.095	Aotus_nancymaae
ENSPTRG00000048100	-	95	56.947	ENSACLG00000014617	srp72	99	56.667	Astatotilapia_calliptera
ENSPTRG00000048100	-	95	58.679	ENSAMXG00000004011	srp72	98	58.257	Astyanax_mexicanus
ENSPTRG00000048100	-	95	72.672	ENSBTAG00000010593	SRP72	99	71.644	Bos_taurus
ENSPTRG00000048100	-	95	72.977	ENSCJAG00000017998	SRP72	99	71.946	Callithrix_jacchus
ENSPTRG00000048100	-	95	73.435	ENSCAFG00000002244	SRP72	99	72.398	Canis_familiaris
ENSPTRG00000048100	-	95	73.435	ENSCAFG00020027338	SRP72	99	71.407	Canis_lupus_dingo
ENSPTRG00000048100	-	95	70.928	ENSCHIG00000021465	SRP72	99	69.925	Capra_hircus
ENSPTRG00000048100	-	98	72.090	ENSTSYG00000010571	-	97	72.424	Carlito_syrichta
ENSPTRG00000048100	-	81	59.551	ENSCAPG00000016668	SRP72	93	70.293	Cavia_aperea
ENSPTRG00000048100	-	95	73.282	ENSCPOG00000000218	SRP72	99	72.247	Cavia_porcellus
ENSPTRG00000048100	-	99	71.387	ENSCCAG00000030683	-	100	70.949	Cebus_capucinus
ENSPTRG00000048100	-	99	70.606	ENSCCAG00000030830	-	99	70.059	Cebus_capucinus
ENSPTRG00000048100	-	95	73.740	ENSCATG00000008072	SRP72	99	72.700	Cercocebus_atys
ENSPTRG00000048100	-	96	72.857	ENSCATG00000045359	-	98	72.670	Cercocebus_atys
ENSPTRG00000048100	-	95	72.672	ENSCLAG00000003571	SRP72	99	71.644	Chinchilla_lanigera
ENSPTRG00000048100	-	95	68.196	ENSCSAG00000005079	SRP72	99	66.868	Chlorocebus_sabaeus
ENSPTRG00000048100	-	84	79.412	ENSCHOG00000013240	SRP72	86	79.412	Choloepus_hoffmanni
ENSPTRG00000048100	-	93	65.630	ENSCPBG00000015015	SRP72	99	64.555	Chrysemys_picta_bellii
ENSPTRG00000048100	-	86	39.233	ENSCING00000002417	-	82	39.233	Ciona_intestinalis
ENSPTRG00000048100	-	86	38.674	ENSCSAVG00000011288	-	97	33.135	Ciona_savignyi
ENSPTRG00000048100	-	93	75.436	ENSCANG00000037920	-	96	75.436	Colobus_angolensis_palliatus
ENSPTRG00000048100	-	95	73.740	ENSCANG00000041709	SRP72	99	72.700	Colobus_angolensis_palliatus
ENSPTRG00000048100	-	95	72.214	ENSCGRG00001013548	Srp72	99	71.192	Cricetulus_griseus_chok1gshd
ENSPTRG00000048100	-	89	72.816	ENSCGRG00000003013	Srp72	98	71.725	Cricetulus_griseus_crigri
ENSPTRG00000048100	-	95	57.557	ENSCSEG00000003616	srp72	99	56.863	Cynoglossus_semilaevis
ENSPTRG00000048100	-	88	57.143	ENSCVAG00000001520	srp72	99	56.979	Cyprinodon_variegatus
ENSPTRG00000048100	-	81	57.368	ENSDARG00000014139	srp72	98	56.627	Danio_rerio
ENSPTRG00000048100	-	95	68.502	ENSDNOG00000039012	SRP72	82	67.523	Dasypus_novemcinctus
ENSPTRG00000048100	-	93	73.250	ENSDORG00000000171	Srp72	99	71.386	Dipodomys_ordii
ENSPTRG00000048100	-	88	33.601	FBgn0038810	Srp72	94	34.029	Drosophila_melanogaster
ENSPTRG00000048100	-	93	72.162	ENSETEG00000005191	SRP72	99	70.331	Echinops_telfairi
ENSPTRG00000048100	-	82	45.604	ENSEBUG00000003696	srp72	99	44.304	Eptatretus_burgeri
ENSPTRG00000048100	-	95	72.824	ENSEASG00005017747	SRP72	99	71.795	Equus_asinus_asinus
ENSPTRG00000048100	-	94	73.261	ENSECAG00000006920	SRP72	99	71.644	Equus_caballus
ENSPTRG00000048100	-	94	57.055	ENSELUG00000022415	srp72	99	57.404	Esox_lucius
ENSPTRG00000048100	-	94	73.570	ENSFCAG00000027600	SRP72	98	72.121	Felis_catus
ENSPTRG00000048100	-	93	65.528	ENSFALG00000006713	SRP72	99	64.103	Ficedula_albicollis
ENSPTRG00000048100	-	93	44.059	ENSFDAG00000009793	-	95	43.485	Fukomys_damarensis
ENSPTRG00000048100	-	95	72.853	ENSFDAG00000002014	-	98	71.818	Fukomys_damarensis
ENSPTRG00000048100	-	95	56.707	ENSFHEG00000017652	srp72	91	56.884	Fundulus_heteroclitus
ENSPTRG00000048100	-	94	54.531	ENSGMOG00000005986	srp72	98	54.255	Gadus_morhua
ENSPTRG00000048100	-	93	65.421	ENSGALG00000011403	SRP72	98	64.492	Gallus_gallus
ENSPTRG00000048100	-	95	57.252	ENSGAFG00000017762	srp72	99	56.884	Gambusia_affinis
ENSPTRG00000048100	-	95	55.335	ENSGACG00000016749	srp72	98	55.522	Gasterosteus_aculeatus
ENSPTRG00000048100	-	84	64.505	ENSGAGG00000024611	SRP72	97	63.714	Gopherus_agassizii
ENSPTRG00000048100	-	99	72.555	ENSGGOG00000013234	-	100	72.117	Gorilla_gorilla
ENSPTRG00000048100	-	95	56.947	ENSHBUG00000020723	srp72	99	56.667	Haplochromis_burtoni
ENSPTRG00000048100	-	95	58.425	ENSHGLG00000018597	-	98	58.075	Heterocephalus_glaber_female
ENSPTRG00000048100	-	86	67.347	ENSHGLG00000010633	-	99	67.005	Heterocephalus_glaber_female
ENSPTRG00000048100	-	95	70.262	ENSHGLG00000005029	-	99	68.645	Heterocephalus_glaber_female
ENSPTRG00000048100	-	82	70.513	ENSHGLG00000003950	-	99	68.559	Heterocephalus_glaber_female
ENSPTRG00000048100	-	95	73.130	ENSHGLG00000009791	SRP72	99	72.097	Heterocephalus_glaber_female
ENSPTRG00000048100	-	95	70.262	ENSHGLG00100011236	-	99	68.645	Heterocephalus_glaber_male
ENSPTRG00000048100	-	95	73.130	ENSHGLG00100009021	SRP72	99	72.097	Heterocephalus_glaber_male
ENSPTRG00000048100	-	82	70.513	ENSHGLG00100017133	-	99	68.438	Heterocephalus_glaber_male
ENSPTRG00000048100	-	94	56.960	ENSHGLG00100009346	-	99	56.162	Heterocephalus_glaber_male
ENSPTRG00000048100	-	95	57.274	ENSHCOG00000013760	srp72	99	56.732	Hippocampus_comes
ENSPTRG00000048100	-	95	56.728	ENSIPUG00000000210	srp72	99	56.146	Ictalurus_punctatus
ENSPTRG00000048100	-	95	73.282	ENSSTOG00000007305	SRP72	99	72.247	Ictidomys_tridecemlineatus
ENSPTRG00000048100	-	93	72.897	ENSJJAG00000018324	Srp72	97	71.341	Jaculus_jaculus
ENSPTRG00000048100	-	95	56.947	ENSKMAG00000003776	srp72	99	56.430	Kryptolebias_marmoratus
ENSPTRG00000048100	-	99	57.413	ENSLOCG00000002628	srp72	98	58.574	Lepisosteus_oculatus
ENSPTRG00000048100	-	95	72.519	ENSLAFG00000018307	SRP72	99	71.493	Loxodonta_africana
ENSPTRG00000048100	-	97	73.975	ENSMFAG00000037164	-	99	74.116	Macaca_fascicularis
ENSPTRG00000048100	-	94	74.189	ENSMFAG00000031065	SRP72	99	72.549	Macaca_fascicularis
ENSPTRG00000048100	-	94	72.054	ENSMMUG00000021262	-	99	72.054	Macaca_mulatta
ENSPTRG00000048100	-	97	73.802	ENSMMUG00000016368	SRP72	100	72.781	Macaca_mulatta
ENSPTRG00000048100	-	99	72.969	ENSMNEG00000038065	-	100	71.971	Macaca_nemestrina
ENSPTRG00000048100	-	99	72.394	ENSMLEG00000030140	-	100	71.953	Mandrillus_leucophaeus
ENSPTRG00000048100	-	95	56.336	ENSMAMG00000014989	srp72	87	56.061	Mastacembelus_armatus
ENSPTRG00000048100	-	95	56.947	ENSMZEG00005003325	srp72	99	56.667	Maylandia_zebra
ENSPTRG00000048100	-	89	61.712	ENSMGAG00000008567	SRP72	98	65.359	Meleagris_gallopavo
ENSPTRG00000048100	-	93	73.406	ENSMAUG00000001237	Srp72	98	71.667	Mesocricetus_auratus
ENSPTRG00000048100	-	99	70.468	ENSMICG00000008507	-	99	70.029	Microcebus_murinus
ENSPTRG00000048100	-	95	72.061	ENSMOCG00000020309	Srp72	99	71.041	Microtus_ochrogaster
ENSPTRG00000048100	-	95	54.809	ENSMMOG00000002627	srp72	99	54.902	Mola_mola
ENSPTRG00000048100	-	93	66.459	ENSMODG00000020697	SRP72	98	64.947	Monodelphis_domestica
ENSPTRG00000048100	-	95	55.878	ENSMALG00000003747	srp72	99	55.667	Monopterus_albus
ENSPTRG00000048100	-	95	71.756	MGP_CAROLIEiJ_G0027323	Srp72	99	70.739	Mus_caroli
ENSPTRG00000048100	-	95	71.756	ENSMUSG00000036323	Srp72	99	70.739	Mus_musculus
ENSPTRG00000048100	-	94	72.488	MGP_PahariEiJ_G0017103	Srp72	98	71.061	Mus_pahari
ENSPTRG00000048100	-	95	71.756	MGP_SPRETEiJ_G0028317	Srp72	99	70.739	Mus_spretus
ENSPTRG00000048100	-	93	74.028	ENSMPUG00000004828	SRP72	98	72.273	Mustela_putorius_furo
ENSPTRG00000048100	-	93	72.671	ENSMLUG00000007344	SRP72	98	70.802	Myotis_lucifugus
ENSPTRG00000048100	-	95	71.908	ENSNGAG00000012595	Srp72	99	70.890	Nannospalax_galili
ENSPTRG00000048100	-	95	54.046	ENSNBRG00000014492	srp72	99	53.788	Neolamprologus_brichardi
ENSPTRG00000048100	-	95	74.598	ENSNLEG00000008806	-	99	73.376	Nomascus_leucogenys
ENSPTRG00000048100	-	83	76.842	ENSMEUG00000005164	SRP72	88	71.717	Notamacropus_eugenii
ENSPTRG00000048100	-	93	71.651	ENSOPRG00000012521	SRP72	99	69.834	Ochotona_princeps
ENSPTRG00000048100	-	93	71.739	ENSODEG00000012214	SRP72	98	70.045	Octodon_degus
ENSPTRG00000048100	-	95	57.099	ENSONIG00000001446	srp72	98	56.818	Oreochromis_niloticus
ENSPTRG00000048100	-	94	53.599	ENSOANG00000008562	SRP72	98	53.030	Ornithorhynchus_anatinus
ENSPTRG00000048100	-	95	73.089	ENSOCUG00000012226	SRP72	99	71.946	Oryctolagus_cuniculus
ENSPTRG00000048100	-	94	55.692	ENSORLG00000020418	srp72	98	55.199	Oryzias_latipes
ENSPTRG00000048100	-	96	54.863	ENSORLG00020009138	srp72	97	53.404	Oryzias_latipes_hni
ENSPTRG00000048100	-	94	55.077	ENSORLG00015018251	srp72	98	54.587	Oryzias_latipes_hsok
ENSPTRG00000048100	-	94	55.118	ENSOMEG00000022008	srp72	98	55.243	Oryzias_melastigma
ENSPTRG00000048100	-	94	73.107	ENSOGAG00000003578	SRP72	99	71.493	Otolemur_garnettii
ENSPTRG00000048100	-	95	72.824	ENSOARG00000004329	SRP72	99	71.795	Ovis_aries
ENSPTRG00000048100	-	100	95.881	ENSPPAG00000011428	-	100	95.881	Pan_paniscus
ENSPTRG00000048100	-	95	73.893	ENSPPAG00000042265	SRP72	99	72.851	Pan_paniscus
ENSPTRG00000048100	-	76	61.822	ENSPPAG00000032490	-	91	61.923	Pan_paniscus
ENSPTRG00000048100	-	93	73.872	ENSPPRG00000015991	SRP72	98	72.121	Panthera_pardus
ENSPTRG00000048100	-	93	73.872	ENSPTIG00000018786	SRP72	98	72.121	Panthera_tigris_altaica
ENSPTRG00000048100	-	95	73.740	ENSPANG00000005495	SRP72	99	72.700	Papio_anubis
ENSPTRG00000048100	-	93	71.757	ENSPANG00000030230	-	99	71.927	Papio_anubis
ENSPTRG00000048100	-	89	65.378	ENSPSIG00000003003	SRP72	98	64.865	Pelodiscus_sinensis
ENSPTRG00000048100	-	93	72.628	ENSPEMG00000012828	-	98	70.909	Peromyscus_maniculatus_bairdii
ENSPTRG00000048100	-	94	68.111	ENSPCIG00000000732	SRP72	98	66.667	Phascolarctos_cinereus
ENSPTRG00000048100	-	95	56.794	ENSPFOG00000003480	srp72	99	56.430	Poecilia_formosa
ENSPTRG00000048100	-	95	56.947	ENSPLAG00000020122	srp72	99	56.581	Poecilia_latipinna
ENSPTRG00000048100	-	95	56.489	ENSPMEG00000019988	srp72	99	56.127	Poecilia_mexicana
ENSPTRG00000048100	-	95	56.641	ENSPREG00000006218	srp72	99	56.278	Poecilia_reticulata
ENSPTRG00000048100	-	53	61.111	ENSPPYG00000009152	-	97	60.881	Pongo_abelii
ENSPTRG00000048100	-	95	74.046	ENSPPYG00000014752	-	77	73.002	Pongo_abelii
ENSPTRG00000048100	-	95	73.920	ENSPVAG00000005590	SRP72	99	72.866	Pteropus_vampyrus
ENSPTRG00000048100	-	95	57.252	ENSPNYG00000001916	srp72	99	56.970	Pundamilia_nyererei
ENSPTRG00000048100	-	95	58.716	ENSPNAG00000022424	srp72	99	58.118	Pygocentrus_nattereri
ENSPTRG00000048100	-	95	71.407	ENSRNOG00000002100	LOC108348180	99	70.242	Rattus_norvegicus
ENSPTRG00000048100	-	95	71.545	ENSRBIG00000029328	-	98	71.545	Rhinopithecus_bieti
ENSPTRG00000048100	-	95	68.654	ENSRBIG00000042069	SRP72	99	67.674	Rhinopithecus_bieti
ENSPTRG00000048100	-	95	73.740	ENSRROG00000035704	SRP72	99	72.700	Rhinopithecus_roxellana
ENSPTRG00000048100	-	91	66.824	ENSSHAG00000000614	SRP72	96	65.839	Sarcophilus_harrisii
ENSPTRG00000048100	-	95	58.525	ENSSFOG00015002026	srp72	99	57.663	Scleropages_formosus
ENSPTRG00000048100	-	94	55.436	ENSSMAG00000007639	srp72	98	55.152	Scophthalmus_maximus
ENSPTRG00000048100	-	95	56.947	ENSSDUG00000007345	srp72	97	57.382	Seriola_dumerili
ENSPTRG00000048100	-	95	57.099	ENSSLDG00000021819	srp72	98	57.078	Seriola_lalandi_dorsalis
ENSPTRG00000048100	-	70	67.895	ENSSARG00000005804	SRP72	73	65.722	Sorex_araneus
ENSPTRG00000048100	-	93	65.265	ENSSPUG00000009740	SRP72	98	63.636	Sphenodon_punctatus
ENSPTRG00000048100	-	95	56.336	ENSSPAG00000011565	srp72	99	56.667	Stegastes_partitus
ENSPTRG00000048100	-	94	73.576	ENSSSCG00000008900	SRP72	98	72.093	Sus_scrofa
ENSPTRG00000048100	-	93	65.528	ENSTGUG00000004767	SRP72	99	64.006	Taeniopygia_guttata
ENSPTRG00000048100	-	95	55.505	ENSTRUG00000009831	srp72	98	55.403	Takifugu_rubripes
ENSPTRG00000048100	-	95	57.252	ENSTNIG00000013073	srp72	98	56.970	Tetraodon_nigroviridis
ENSPTRG00000048100	-	85	62.376	ENSTBEG00000007394	SRP72	77	75.758	Tupaia_belangeri
ENSPTRG00000048100	-	89	73.301	ENSTTRG00000010945	SRP72	99	72.204	Tursiops_truncatus
ENSPTRG00000048100	-	54	72.178	ENSUAMG00000001701	SRP72	98	70.437	Ursus_americanus
ENSPTRG00000048100	-	93	73.872	ENSUMAG00000008151	SRP72	98	72.121	Ursus_maritimus
ENSPTRG00000048100	-	94	71.605	ENSVPAG00000000458	SRP72	99	70.030	Vicugna_pacos
ENSPTRG00000048100	-	95	73.435	ENSVVUG00000006020	SRP72	99	72.398	Vulpes_vulpes
ENSPTRG00000048100	-	89	59.677	ENSXETG00000010205	srp72	99	59.076	Xenopus_tropicalis
ENSPTRG00000048100	-	95	56.794	ENSXMAG00000018000	srp72	99	56.344	Xiphophorus_maculatus