EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000048135 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 101158 bases
Position: chrKV421332.1:16192-117349
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000063609	Exo_endo_phos	PF03372.23	1.3e-14	1	1
ENSPTRP00000086676	Exo_endo_phos	PF03372.23	1.8e-14	1	1
ENSPTRP00000091422	Exo_endo_phos	PF03372.23	1.9e-14	1	1
ENSPTRP00000063609	DUF1866	PF08952.11	6.8e-60	1	1
ENSPTRP00000086676	DUF1866	PF08952.11	7.6e-60	1	1
ENSPTRP00000091422	DUF1866	PF08952.11	8e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000092103	-	4758	XM_009452422	ENSPTRP00000091422	1585 (aa)	-	A0A2I3TQ97
ENSPTRT00000109014	-	8160	XM_016947164	ENSPTRP00000063609	1264 (aa)	-	A0A2I3RG40
ENSPTRT00000080010	-	8126	XM_009452925	ENSPTRP00000086676	1528 (aa)	-	K7DT57

Gene Model

Click here to download ENSPTRG00000048135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000048135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000048135	-	99	48.012	ENSPTRG00000018739	SYNJ2	85	53.568
ENSPTRG00000048135	-	100	100.000	ENSPTRG00000023787	SYNJ1	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000048135	-	100	99.921	ENSG00000159082	SYNJ1	100	100.000	Homo_sapiens
ENSPTRG00000048135	-	92	75.515	ENSAPOG00000002809	synj1	98	69.715	Acanthochromis_polyacanthus
ENSPTRG00000048135	-	99	92.508	ENSAMEG00000015028	SYNJ1	100	90.149	Ailuropoda_melanoleuca
ENSPTRG00000048135	-	99	67.700	ENSACIG00000008857	synj1	95	68.944	Amphilophus_citrinellus
ENSPTRG00000048135	-	99	68.433	ENSAOCG00000009835	synj1	100	67.106	Amphiprion_ocellaris
ENSPTRG00000048135	-	76	75.430	ENSAPEG00000021010	synj1	87	66.531	Amphiprion_percula
ENSPTRG00000048135	-	99	69.506	ENSATEG00000002306	synj1	87	66.121	Anabas_testudineus
ENSPTRG00000048135	-	100	80.696	ENSAPLG00000011832	SYNJ1	100	76.933	Anas_platyrhynchos
ENSPTRG00000048135	-	100	80.655	ENSACAG00000003006	-	100	80.168	Anolis_carolinensis
ENSPTRG00000048135	-	100	96.567	ENSANAG00000027325	SYNJ1	100	96.567	Aotus_nancymaae
ENSPTRG00000048135	-	97	70.644	ENSACLG00000002255	synj1	100	69.276	Astatotilapia_calliptera
ENSPTRG00000048135	-	99	70.401	ENSAMXG00000008208	synj1	95	63.480	Astyanax_mexicanus
ENSPTRG00000048135	-	99	93.470	ENSBTAG00000003063	SYNJ1	100	90.371	Bos_taurus
ENSPTRG00000048135	-	99	99.285	ENSCJAG00000009187	SYNJ1	100	98.169	Callithrix_jacchus
ENSPTRG00000048135	-	99	94.762	ENSCAFG00000009041	SYNJ1	99	94.766	Canis_familiaris
ENSPTRG00000048135	-	99	95.628	ENSCAFG00020025776	SYNJ1	100	92.736	Canis_lupus_dingo
ENSPTRG00000048135	-	99	94.436	ENSCHIG00000005095	SYNJ1	100	90.582	Capra_hircus
ENSPTRG00000048135	-	99	96.900	ENSTSYG00000014541	SYNJ1	100	95.353	Carlito_syrichta
ENSPTRG00000048135	-	97	77.262	ENSCAPG00000014483	SYNJ1	99	82.519	Cavia_aperea
ENSPTRG00000048135	-	98	94.980	ENSCPOG00000012182	SYNJ1	100	91.230	Cavia_porcellus
ENSPTRG00000048135	-	100	98.103	ENSCCAG00000020825	SYNJ1	100	98.103	Cebus_capucinus
ENSPTRG00000048135	-	100	99.288	ENSCATG00000033891	SYNJ1	100	99.288	Cercocebus_atys
ENSPTRG00000048135	-	100	90.487	ENSCLAG00000009796	SYNJ1	100	98.413	Chinchilla_lanigera
ENSPTRG00000048135	-	100	95.282	ENSCSAG00000009654	SYNJ1	100	95.282	Chlorocebus_sabaeus
ENSPTRG00000048135	-	84	92.508	ENSCHOG00000012390	SYNJ1	81	92.508	Choloepus_hoffmanni
ENSPTRG00000048135	-	94	86.281	ENSCPBG00000006402	SYNJ1	100	84.836	Chrysemys_picta_bellii
ENSPTRG00000048135	-	99	99.444	ENSCANG00000031359	SYNJ1	100	98.364	Colobus_angolensis_palliatus
ENSPTRG00000048135	-	99	93.720	ENSCGRG00001010861	Synj1	100	89.726	Cricetulus_griseus_chok1gshd
ENSPTRG00000048135	-	100	88.737	ENSCGRG00000015749	Synj1	100	96.825	Cricetulus_griseus_crigri
ENSPTRG00000048135	-	86	75.453	ENSCSEG00000019614	synj1	99	71.250	Cynoglossus_semilaevis
ENSPTRG00000048135	-	86	73.381	ENSCVAG00000019250	synj1	100	66.667	Cyprinodon_variegatus
ENSPTRG00000048135	-	86	77.413	ENSDARG00000025011	synj1	100	71.514	Danio_rerio
ENSPTRG00000048135	-	98	85.836	ENSDNOG00000010732	SYNJ1	99	83.470	Dasypus_novemcinctus
ENSPTRG00000048135	-	55	98.124	ENSDORG00000014735	-	100	98.124	Dipodomys_ordii
ENSPTRG00000048135	-	86	94.872	ENSETEG00000018674	SYNJ1	79	95.522	Echinops_telfairi
ENSPTRG00000048135	-	99	95.246	ENSEASG00005006287	SYNJ1	98	95.912	Equus_asinus_asinus
ENSPTRG00000048135	-	99	95.516	ENSECAG00000004829	SYNJ1	100	95.411	Equus_caballus
ENSPTRG00000048135	-	92	87.687	ENSEEUG00000005150	SYNJ1	95	87.992	Erinaceus_europaeus
ENSPTRG00000048135	-	99	66.926	ENSELUG00000009731	synj1	90	67.633	Esox_lucius
ENSPTRG00000048135	-	99	95.997	ENSFCAG00000012498	SYNJ1	100	92.619	Felis_catus
ENSPTRG00000048135	-	73	73.238	ENSFALG00000004680	SYNJ1	100	69.416	Ficedula_albicollis
ENSPTRG00000048135	-	100	90.411	ENSFDAG00000016818	SYNJ1	100	98.413	Fukomys_damarensis
ENSPTRG00000048135	-	99	68.945	ENSFHEG00000017689	synj1	89	64.040	Fundulus_heteroclitus
ENSPTRG00000048135	-	79	72.890	ENSGMOG00000014852	synj1	77	72.620	Gadus_morhua
ENSPTRG00000048135	-	100	85.918	ENSGALG00000034317	SYNJ1	100	79.935	Gallus_gallus
ENSPTRG00000048135	-	99	69.423	ENSGAFG00000019466	synj1	89	65.894	Gambusia_affinis
ENSPTRG00000048135	-	99	62.726	ENSGACG00000020575	synj1	93	65.721	Gasterosteus_aculeatus
ENSPTRG00000048135	-	100	86.310	ENSGAGG00000022523	SYNJ1	100	82.172	Gopherus_agassizii
ENSPTRG00000048135	-	100	99.604	ENSGGOG00000015945	SYNJ1	100	99.604	Gorilla_gorilla
ENSPTRG00000048135	-	97	70.644	ENSHBUG00000007774	synj1	100	69.276	Haplochromis_burtoni
ENSPTRG00000048135	-	100	90.107	ENSHGLG00000006420	SYNJ1	100	98.413	Heterocephalus_glaber_female
ENSPTRG00000048135	-	100	91.588	ENSHGLG00100012591	SYNJ1	100	98.413	Heterocephalus_glaber_male
ENSPTRG00000048135	-	99	66.119	ENSHCOG00000012774	synj1	96	66.064	Hippocampus_comes
ENSPTRG00000048135	-	99	70.958	ENSIPUG00000010691	SYNJ1	96	62.630	Ictalurus_punctatus
ENSPTRG00000048135	-	100	91.730	ENSSTOG00000015806	SYNJ1	100	92.956	Ictidomys_tridecemlineatus
ENSPTRG00000048135	-	98	85.290	ENSJJAG00000020168	Synj1	100	83.260	Jaculus_jaculus
ENSPTRG00000048135	-	89	73.619	ENSKMAG00000004221	synj1	94	73.213	Kryptolebias_marmoratus
ENSPTRG00000048135	-	99	69.922	ENSLBEG00000015081	synj1	95	67.255	Labrus_bergylta
ENSPTRG00000048135	-	98	66.959	ENSLACG00000005928	SYNJ1	98	68.584	Latimeria_chalumnae
ENSPTRG00000048135	-	100	73.828	ENSLOCG00000009230	synj1	100	68.200	Lepisosteus_oculatus
ENSPTRG00000048135	-	99	90.054	ENSLAFG00000011806	SYNJ1	99	87.350	Loxodonta_africana
ENSPTRG00000048135	-	98	97.664	ENSMFAG00000018883	SYNJ1	99	97.664	Macaca_fascicularis
ENSPTRG00000048135	-	100	95.586	ENSMMUG00000004624	SYNJ1	100	95.586	Macaca_mulatta
ENSPTRG00000048135	-	99	99.364	ENSMNEG00000040077	SYNJ1	100	98.102	Macaca_nemestrina
ENSPTRG00000048135	-	99	99.444	ENSMLEG00000037029	SYNJ1	100	98.364	Mandrillus_leucophaeus
ENSPTRG00000048135	-	99	69.697	ENSMAMG00000013404	synj1	89	65.818	Mastacembelus_armatus
ENSPTRG00000048135	-	97	71.120	ENSMZEG00005024358	synj1	100	69.814	Maylandia_zebra
ENSPTRG00000048135	-	100	82.974	ENSMGAG00000014522	SYNJ1	100	77.644	Meleagris_gallopavo
ENSPTRG00000048135	-	100	88.508	ENSMAUG00000009743	Synj1	100	96.537	Mesocricetus_auratus
ENSPTRG00000048135	-	100	97.468	ENSMICG00000034953	SYNJ1	100	97.468	Microcebus_murinus
ENSPTRG00000048135	-	89	73.288	ENSMMOG00000010203	synj1	99	67.629	Mola_mola
ENSPTRG00000048135	-	99	76.646	ENSMODG00000021073	SYNJ1	100	78.089	Monodelphis_domestica
ENSPTRG00000048135	-	99	67.318	ENSMALG00000014015	synj1	88	65.989	Monopterus_albus
ENSPTRG00000048135	-	100	88.897	MGP_CAROLIEiJ_G0020951	Synj1	100	97.403	Mus_caroli
ENSPTRG00000048135	-	100	88.973	ENSMUSG00000022973	Synj1	100	97.691	Mus_musculus
ENSPTRG00000048135	-	100	89.125	MGP_PahariEiJ_G0016656	Synj1	100	97.691	Mus_pahari
ENSPTRG00000048135	-	100	88.973	MGP_SPRETEiJ_G0021857	Synj1	100	97.691	Mus_spretus
ENSPTRG00000048135	-	99	90.320	ENSMPUG00000001153	SYNJ1	100	88.116	Mustela_putorius_furo
ENSPTRG00000048135	-	53	94.925	ENSMLUG00000026584	-	100	94.925	Myotis_lucifugus
ENSPTRG00000048135	-	64	72.771	ENSMLUG00000005764	-	99	73.929	Myotis_lucifugus
ENSPTRG00000048135	-	100	89.954	ENSNGAG00000000453	Synj1	100	97.547	Nannospalax_galili
ENSPTRG00000048135	-	86	72.562	ENSNBRG00000011936	synj1	95	60.594	Neolamprologus_brichardi
ENSPTRG00000048135	-	90	98.737	ENSNLEG00000003734	SYNJ1	100	98.737	Nomascus_leucogenys
ENSPTRG00000048135	-	88	72.327	ENSMEUG00000004158	-	78	73.300	Notamacropus_eugenii
ENSPTRG00000048135	-	93	92.467	ENSOPRG00000013602	SYNJ1	93	92.683	Ochotona_princeps
ENSPTRG00000048135	-	55	98.124	ENSODEG00000002409	-	100	98.124	Octodon_degus
ENSPTRG00000048135	-	99	68.989	ENSONIG00000004667	synj1	100	65.987	Oreochromis_niloticus
ENSPTRG00000048135	-	97	83.112	ENSOANG00000006929	SYNJ1	97	76.248	Ornithorhynchus_anatinus
ENSPTRG00000048135	-	98	88.443	ENSOCUG00000001420	SYNJ1	100	87.412	Oryctolagus_cuniculus
ENSPTRG00000048135	-	86	75.136	ENSORLG00000004320	synj1	100	67.383	Oryzias_latipes
ENSPTRG00000048135	-	86	73.412	ENSORLG00020011994	synj1	94	67.060	Oryzias_latipes_hni
ENSPTRG00000048135	-	86	75.777	ENSORLG00015018077	synj1	95	61.529	Oryzias_latipes_hsok
ENSPTRG00000048135	-	86	76.325	ENSOMEG00000014322	synj1	99	66.273	Oryzias_melastigma
ENSPTRG00000048135	-	100	87.638	ENSOGAG00000006010	SYNJ1	100	87.931	Otolemur_garnettii
ENSPTRG00000048135	-	99	88.872	ENSOARG00000013414	SYNJ1	100	85.978	Ovis_aries
ENSPTRG00000048135	-	100	99.869	ENSPPAG00000026784	SYNJ1	100	99.869	Pan_paniscus
ENSPTRG00000048135	-	99	95.997	ENSPPRG00000023469	SYNJ1	100	92.750	Panthera_pardus
ENSPTRG00000048135	-	99	95.917	ENSPTIG00000007930	SYNJ1	100	92.750	Panthera_tigris_altaica
ENSPTRG00000048135	-	99	99.444	ENSPANG00000022531	SYNJ1	100	98.298	Papio_anubis
ENSPTRG00000048135	-	87	78.312	ENSPKIG00000022603	synj1	89	78.611	Paramormyrops_kingsleyae
ENSPTRG00000048135	-	86	76.325	ENSPMGG00000016831	synj1	91	66.142	Periophthalmus_magnuspinnatus
ENSPTRG00000048135	-	100	88.889	ENSPEMG00000018767	Synj1	100	96.970	Peromyscus_maniculatus_bairdii
ENSPTRG00000048135	-	81	60.903	ENSPMAG00000002887	synj1	80	59.012	Petromyzon_marinus
ENSPTRG00000048135	-	99	87.816	ENSPCIG00000016372	SYNJ1	100	85.137	Phascolarctos_cinereus
ENSPTRG00000048135	-	100	68.300	ENSPFOG00000016886	synj1	94	71.576	Poecilia_formosa
ENSPTRG00000048135	-	99	69.057	ENSPLAG00000017559	synj1	96	68.082	Poecilia_latipinna
ENSPTRG00000048135	-	99	69.358	ENSPMEG00000007643	synj1	89	65.714	Poecilia_mexicana
ENSPTRG00000048135	-	99	69.985	ENSPREG00000012412	synj1	94	71.090	Poecilia_reticulata
ENSPTRG00000048135	-	99	94.977	ENSPPYG00000011365	SYNJ1	98	95.924	Pongo_abelii
ENSPTRG00000048135	-	89	94.286	ENSPCAG00000009906	SYNJ1	84	94.286	Procavia_capensis
ENSPTRG00000048135	-	97	91.874	ENSPCOG00000024841	SYNJ1	100	91.874	Propithecus_coquereli
ENSPTRG00000048135	-	99	86.239	ENSPVAG00000000892	SYNJ1	100	85.143	Pteropus_vampyrus
ENSPTRG00000048135	-	86	74.703	ENSPNYG00000022989	synj1	100	67.262	Pundamilia_nyererei
ENSPTRG00000048135	-	87	77.021	ENSPNAG00000021119	synj1	92	76.169	Pygocentrus_nattereri
ENSPTRG00000048135	-	100	89.615	ENSRNOG00000002051	Synj1	100	89.961	Rattus_norvegicus
ENSPTRG00000048135	-	100	98.429	ENSRBIG00000034477	SYNJ1	100	98.429	Rhinopithecus_bieti
ENSPTRG00000048135	-	100	96.610	ENSRROG00000039256	SYNJ1	100	98.351	Rhinopithecus_roxellana
ENSPTRG00000048135	-	99	98.967	ENSSBOG00000021001	SYNJ1	100	97.907	Saimiri_boliviensis_boliviensis
ENSPTRG00000048135	-	99	83.849	ENSSHAG00000008538	SYNJ1	99	78.294	Sarcophilus_harrisii
ENSPTRG00000048135	-	100	71.979	ENSSFOG00015006095	synj1	95	65.130	Scleropages_formosus
ENSPTRG00000048135	-	99	68.576	ENSSMAG00000018066	synj1	95	69.219	Scophthalmus_maximus
ENSPTRG00000048135	-	86	76.524	ENSSDUG00000013058	synj1	88	66.303	Seriola_dumerili
ENSPTRG00000048135	-	100	67.586	ENSSLDG00000021406	synj1	96	71.096	Seriola_lalandi_dorsalis
ENSPTRG00000048135	-	70	95.514	ENSSARG00000009490	SYNJ1	70	95.865	Sorex_araneus
ENSPTRG00000048135	-	100	86.166	ENSSPUG00000012552	SYNJ1	100	78.780	Sphenodon_punctatus
ENSPTRG00000048135	-	86	75.069	ENSSPAG00000006812	SYNJ1	95	58.521	Stegastes_partitus
ENSPTRG00000048135	-	99	68.115	ENSSPAG00000017029	synj1	95	67.123	Stegastes_partitus
ENSPTRG00000048135	-	99	93.918	ENSSSCG00000012035	SYNJ1	100	93.173	Sus_scrofa
ENSPTRG00000048135	-	100	79.924	ENSTGUG00000013445	SYNJ1	100	75.771	Taeniopygia_guttata
ENSPTRG00000048135	-	99	68.185	ENSTRUG00000006907	synj1	97	68.037	Takifugu_rubripes
ENSPTRG00000048135	-	99	66.163	ENSTNIG00000009940	synj1	100	64.963	Tetraodon_nigroviridis
ENSPTRG00000048135	-	92	86.858	ENSTBEG00000016298	SYNJ1	90	86.858	Tupaia_belangeri
ENSPTRG00000048135	-	99	82.989	ENSTTRG00000002222	SYNJ1	100	82.697	Tursiops_truncatus
ENSPTRG00000048135	-	99	96.346	ENSUAMG00000018606	SYNJ1	99	98.117	Ursus_americanus
ENSPTRG00000048135	-	99	96.187	ENSUMAG00000018419	SYNJ1	99	98.117	Ursus_maritimus
ENSPTRG00000048135	-	86	100.000	ENSVPAG00000001241	SYNJ1	85	100.000	Vicugna_pacos
ENSPTRG00000048135	-	96	95.563	ENSVVUG00000023125	SYNJ1	99	92.603	Vulpes_vulpes
ENSPTRG00000048135	-	100	74.888	ENSXETG00000009899	synj1	100	67.038	Xenopus_tropicalis
ENSPTRG00000048135	-	86	75.862	ENSXCOG00000011896	synj1	99	68.851	Xiphophorus_couchianus
ENSPTRG00000048135	-	100	67.461	ENSXMAG00000017524	synj1	100	68.358	Xiphophorus_maculatus