EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000048174 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 4630 bases
Position: chrKV420949.1:137710-142339
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000083030	SBDS	PF01172.18	9.3e-33	1	1
ENSPTRP00000083030	SBDS_C	PF09377.10	2.5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000107299	-	952	XM_016945798	ENSPTRP00000083030	225 (aa)	XP_016801287	A0A2I3T1C6

Gene Model

Click here to download ENSPTRG00000048174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000048174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000048174	-	96	97.235	ENSPTRG00000019254	SBDS	87	97.235
ENSPTRG00000048174	-	96	80.645	ENSPTRG00000047744	-	85	80.645
ENSPTRG00000048174	-	96	81.106	ENSPTRG00000050835	-	85	81.106

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000048174	-	96	97.235	ENSG00000126524	SBDS	97	100.000	Homo_sapiens
ENSPTRG00000048174	-	96	80.645	ENSAPOG00000014285	sbds	87	80.645	Acanthochromis_polyacanthus
ENSPTRG00000048174	-	96	95.853	ENSAMEG00000018167	SBDS	87	95.853	Ailuropoda_melanoleuca
ENSPTRG00000048174	-	98	80.455	ENSACIG00000007308	sbds	86	80.455	Amphilophus_citrinellus
ENSPTRG00000048174	-	96	80.645	ENSAOCG00000016770	sbds	87	80.645	Amphiprion_ocellaris
ENSPTRG00000048174	-	96	81.106	ENSAPEG00000015897	sbds	87	81.106	Amphiprion_percula
ENSPTRG00000048174	-	96	80.645	ENSATEG00000006901	sbds	87	80.645	Anabas_testudineus
ENSPTRG00000048174	-	77	95.977	ENSANAG00000037501	-	84	95.977	Aotus_nancymaae
ENSPTRG00000048174	-	96	89.862	ENSANAG00000024342	-	95	86.747	Aotus_nancymaae
ENSPTRG00000048174	-	96	81.567	ENSACLG00000018750	sbds	87	81.567	Astatotilapia_calliptera
ENSPTRG00000048174	-	96	81.567	ENSAMXG00000005361	sbds	87	81.567	Astyanax_mexicanus
ENSPTRG00000048174	-	96	96.774	ENSBTAG00000004051	SBDS	87	96.774	Bos_taurus
ENSPTRG00000048174	-	89	57.214	WBGene00021063	sbds-1	79	57.214	Caenorhabditis_elegans
ENSPTRG00000048174	-	96	96.774	ENSCJAG00000041007	SBDS	87	96.774	Callithrix_jacchus
ENSPTRG00000048174	-	96	93.607	ENSCAFG00000010797	SBDS	87	93.607	Canis_familiaris
ENSPTRG00000048174	-	96	96.313	ENSCAFG00020005357	SBDS	87	96.313	Canis_lupus_dingo
ENSPTRG00000048174	-	96	96.774	ENSCHIG00000026854	SBDS	87	96.774	Capra_hircus
ENSPTRG00000048174	-	96	97.235	ENSTSYG00000033822	SBDS	87	97.235	Carlito_syrichta
ENSPTRG00000048174	-	58	93.130	ENSCAPG00000006634	SBDS	80	93.130	Cavia_aperea
ENSPTRG00000048174	-	96	95.853	ENSCPOG00000036143	SBDS	87	95.853	Cavia_porcellus
ENSPTRG00000048174	-	96	96.774	ENSCCAG00000020671	SBDS	93	100.000	Cebus_capucinus
ENSPTRG00000048174	-	96	97.235	ENSCATG00000039026	SBDS	87	97.235	Cercocebus_atys
ENSPTRG00000048174	-	92	69.082	ENSCLAG00000002113	-	81	69.082	Chinchilla_lanigera
ENSPTRG00000048174	-	96	95.392	ENSCLAG00000005721	-	87	95.392	Chinchilla_lanigera
ENSPTRG00000048174	-	96	97.235	ENSCSAG00000018275	SBDS	87	97.235	Chlorocebus_sabaeus
ENSPTRG00000048174	-	96	90.783	ENSCHOG00000003795	SBDS	87	90.783	Choloepus_hoffmanni
ENSPTRG00000048174	-	96	86.636	ENSCPBG00000014893	SBDS	87	86.636	Chrysemys_picta_bellii
ENSPTRG00000048174	-	93	68.571	ENSCSAVG00000011811	-	84	68.571	Ciona_savignyi
ENSPTRG00000048174	-	96	96.774	ENSCANG00000032368	SBDS	87	96.774	Colobus_angolensis_palliatus
ENSPTRG00000048174	-	58	90.840	ENSCGRG00001019886	Sbds	80	90.840	Cricetulus_griseus_chok1gshd
ENSPTRG00000048174	-	74	96.407	ENSCGRG00000009211	Sbds	92	96.407	Cricetulus_griseus_crigri
ENSPTRG00000048174	-	93	81.340	ENSCSEG00000005798	sbds	84	81.340	Cynoglossus_semilaevis
ENSPTRG00000048174	-	88	83.249	ENSCVAG00000001053	sbds	87	79.263	Cyprinodon_variegatus
ENSPTRG00000048174	-	96	81.567	ENSDARG00000027803	sbds	87	81.567	Danio_rerio
ENSPTRG00000048174	-	96	95.853	ENSDNOG00000041174	SBDS	87	95.853	Dasypus_novemcinctus
ENSPTRG00000048174	-	96	93.548	ENSDORG00000026218	Sbds	87	93.548	Dipodomys_ordii
ENSPTRG00000048174	-	90	59.606	FBgn0035714	CG8549	72	62.983	Drosophila_melanogaster
ENSPTRG00000048174	-	85	56.545	ENSEBUG00000015780	sbds	81	56.545	Eptatretus_burgeri
ENSPTRG00000048174	-	96	96.774	ENSEASG00005008821	SBDS	87	96.774	Equus_asinus_asinus
ENSPTRG00000048174	-	96	96.774	ENSECAG00000008202	SBDS	87	96.774	Equus_caballus
ENSPTRG00000048174	-	92	76.442	ENSEEUG00000004768	SBDS	100	76.442	Erinaceus_europaeus
ENSPTRG00000048174	-	93	82.297	ENSELUG00000008382	sbds	84	82.297	Esox_lucius
ENSPTRG00000048174	-	96	96.313	ENSFCAG00000022142	SBDS	87	96.313	Felis_catus
ENSPTRG00000048174	-	96	86.636	ENSFALG00000013808	SBDS	87	86.636	Ficedula_albicollis
ENSPTRG00000048174	-	96	95.853	ENSFDAG00000018947	-	87	95.853	Fukomys_damarensis
ENSPTRG00000048174	-	88	80.203	ENSFHEG00000000708	sbds	84	78.469	Fundulus_heteroclitus
ENSPTRG00000048174	-	96	81.106	ENSGMOG00000018356	sbds	86	81.106	Gadus_morhua
ENSPTRG00000048174	-	96	87.097	ENSGALG00000027989	SBDS	87	87.097	Gallus_gallus
ENSPTRG00000048174	-	79	79.775	ENSGAFG00000014204	sbds	83	77.895	Gambusia_affinis
ENSPTRG00000048174	-	96	80.645	ENSGACG00000012697	sbds	87	80.645	Gasterosteus_aculeatus
ENSPTRG00000048174	-	80	86.188	ENSGAGG00000022402	SBDS	85	86.188	Gopherus_agassizii
ENSPTRG00000048174	-	92	74.519	ENSGGOG00000040023	-	77	74.519	Gorilla_gorilla
ENSPTRG00000048174	-	96	81.567	ENSHBUG00000002660	sbds	87	81.567	Haplochromis_burtoni
ENSPTRG00000048174	-	96	94.009	ENSHGLG00000009671	SBDS	87	94.009	Heterocephalus_glaber_female
ENSPTRG00000048174	-	96	94.009	ENSHGLG00100011332	SBDS	87	94.009	Heterocephalus_glaber_male
ENSPTRG00000048174	-	98	79.545	ENSHCOG00000018606	sbds	86	79.545	Hippocampus_comes
ENSPTRG00000048174	-	96	82.488	ENSIPUG00000006536	sbds	87	82.488	Ictalurus_punctatus
ENSPTRG00000048174	-	96	92.166	ENSJJAG00000012033	-	87	92.166	Jaculus_jaculus
ENSPTRG00000048174	-	96	64.545	ENSJJAG00000003934	-	84	64.545	Jaculus_jaculus
ENSPTRG00000048174	-	96	81.567	ENSKMAG00000018542	sbds	87	81.567	Kryptolebias_marmoratus
ENSPTRG00000048174	-	93	79.904	ENSLBEG00000016687	sbds	84	79.904	Labrus_bergylta
ENSPTRG00000048174	-	99	65.929	ENSLACG00000018916	SBDS	86	65.929	Latimeria_chalumnae
ENSPTRG00000048174	-	96	85.253	ENSLOCG00000004073	sbds	87	85.253	Lepisosteus_oculatus
ENSPTRG00000048174	-	96	95.392	ENSLAFG00000008763	SBDS	87	95.392	Loxodonta_africana
ENSPTRG00000048174	-	96	97.235	ENSMFAG00000032620	SBDS	87	97.235	Macaca_fascicularis
ENSPTRG00000048174	-	96	97.235	ENSMMUG00000045653	SBDS	87	97.235	Macaca_mulatta
ENSPTRG00000048174	-	96	97.235	ENSMNEG00000031523	SBDS	87	97.235	Macaca_nemestrina
ENSPTRG00000048174	-	68	94.904	ENSMLEG00000036826	SBDS	75	94.904	Mandrillus_leucophaeus
ENSPTRG00000048174	-	96	80.645	ENSMAMG00000016062	sbds	87	80.645	Mastacembelus_armatus
ENSPTRG00000048174	-	96	81.567	ENSMZEG00005024385	sbds	87	81.567	Maylandia_zebra
ENSPTRG00000048174	-	96	87.097	ENSMGAG00000002119	SBDS	87	87.097	Meleagris_gallopavo
ENSPTRG00000048174	-	96	72.350	ENSMAUG00000022214	-	85	72.350	Mesocricetus_auratus
ENSPTRG00000048174	-	96	96.313	ENSMICG00000014366	SBDS	89	98.824	Microcebus_murinus
ENSPTRG00000048174	-	96	94.931	ENSMOCG00000011739	Sbds	87	94.931	Microtus_ochrogaster
ENSPTRG00000048174	-	85	82.812	ENSMMOG00000005061	sbds	73	82.514	Mola_mola
ENSPTRG00000048174	-	96	94.931	ENSMODG00000006644	SBDS	87	94.931	Monodelphis_domestica
ENSPTRG00000048174	-	96	81.106	ENSMALG00000010219	sbds	87	81.106	Monopterus_albus
ENSPTRG00000048174	-	96	94.931	MGP_CAROLIEiJ_G0027800	Sbds	100	97.674	Mus_caroli
ENSPTRG00000048174	-	96	94.931	ENSMUSG00000025337	Sbds	100	97.674	Mus_musculus
ENSPTRG00000048174	-	96	94.470	MGP_PahariEiJ_G0024384	Sbds	100	97.674	Mus_pahari
ENSPTRG00000048174	-	96	94.931	MGP_SPRETEiJ_G0028798	Sbds	100	97.674	Mus_spretus
ENSPTRG00000048174	-	60	90.370	ENSMPUG00000016192	SBDS	78	90.370	Mustela_putorius_furo
ENSPTRG00000048174	-	66	93.960	ENSMLUG00000013575	SBDS	82	93.960	Myotis_lucifugus
ENSPTRG00000048174	-	96	95.392	ENSNGAG00000012093	Sbds	87	95.392	Nannospalax_galili
ENSPTRG00000048174	-	96	81.567	ENSNBRG00000017027	sbds	87	81.567	Neolamprologus_brichardi
ENSPTRG00000048174	-	96	97.235	ENSNLEG00000013288	SBDS	91	97.727	Nomascus_leucogenys
ENSPTRG00000048174	-	96	93.548	ENSOPRG00000008721	SBDS	87	93.548	Ochotona_princeps
ENSPTRG00000048174	-	96	86.175	ENSODEG00000019253	-	73	86.175	Octodon_degus
ENSPTRG00000048174	-	96	76.037	ENSODEG00000001116	-	86	76.037	Octodon_degus
ENSPTRG00000048174	-	96	69.124	ENSODEG00000000137	-	72	73.272	Octodon_degus
ENSPTRG00000048174	-	96	81.106	ENSONIG00000005874	sbds	87	81.106	Oreochromis_niloticus
ENSPTRG00000048174	-	77	90.230	ENSOANG00000007674	-	84	90.230	Ornithorhynchus_anatinus
ENSPTRG00000048174	-	96	94.931	ENSOCUG00000003170	SBDS	87	94.931	Oryctolagus_cuniculus
ENSPTRG00000048174	-	88	82.234	ENSORLG00000023489	sbds	87	77.880	Oryzias_latipes
ENSPTRG00000048174	-	88	81.726	ENSORLG00020019282	sbds	87	77.419	Oryzias_latipes_hni
ENSPTRG00000048174	-	88	81.726	ENSORLG00015008005	sbds	87	77.419	Oryzias_latipes_hsok
ENSPTRG00000048174	-	96	78.341	ENSOMEG00000022747	sbds	87	78.341	Oryzias_melastigma
ENSPTRG00000048174	-	96	95.392	ENSOGAG00000009011	-	87	95.392	Otolemur_garnettii
ENSPTRG00000048174	-	96	76.959	ENSOGAG00000015036	-	87	76.959	Otolemur_garnettii
ENSPTRG00000048174	-	96	96.774	ENSOARG00000010609	SBDS	87	96.774	Ovis_aries
ENSPTRG00000048174	-	96	97.235	ENSPPAG00000043889	-	87	97.235	Pan_paniscus
ENSPTRG00000048174	-	96	96.313	ENSPPRG00000002307	SBDS	87	96.313	Panthera_pardus
ENSPTRG00000048174	-	96	96.313	ENSPTIG00000021308	SBDS	87	96.313	Panthera_tigris_altaica
ENSPTRG00000048174	-	96	96.774	ENSPANG00000004078	SBDS	87	96.774	Papio_anubis
ENSPTRG00000048174	-	96	81.567	ENSPKIG00000006489	sbds	87	81.567	Paramormyrops_kingsleyae
ENSPTRG00000048174	-	77	87.356	ENSPSIG00000014603	SBDS	84	87.356	Pelodiscus_sinensis
ENSPTRG00000048174	-	93	82.297	ENSPMGG00000004246	sbds	84	82.297	Periophthalmus_magnuspinnatus
ENSPTRG00000048174	-	96	94.931	ENSPEMG00000008728	Sbds	87	94.931	Peromyscus_maniculatus_bairdii
ENSPTRG00000048174	-	96	93.088	ENSPCIG00000029718	SBDS	87	93.088	Phascolarctos_cinereus
ENSPTRG00000048174	-	88	82.234	ENSPFOG00000015837	sbds	87	78.341	Poecilia_formosa
ENSPTRG00000048174	-	88	82.234	ENSPLAG00000003641	sbds	87	78.341	Poecilia_latipinna
ENSPTRG00000048174	-	88	82.234	ENSPMEG00000019483	sbds	87	78.341	Poecilia_mexicana
ENSPTRG00000048174	-	88	81.726	ENSPREG00000018758	sbds	87	77.880	Poecilia_reticulata
ENSPTRG00000048174	-	96	97.235	ENSPPYG00000017513	SBDS	87	97.235	Pongo_abelii
ENSPTRG00000048174	-	96	96.313	ENSPCOG00000021098	SBDS	88	100.000	Propithecus_coquereli
ENSPTRG00000048174	-	96	96.313	ENSPVAG00000009369	SBDS	87	96.313	Pteropus_vampyrus
ENSPTRG00000048174	-	96	81.567	ENSPNYG00000022403	sbds	87	81.567	Pundamilia_nyererei
ENSPTRG00000048174	-	96	82.028	ENSPNAG00000001120	sbds	87	82.028	Pygocentrus_nattereri
ENSPTRG00000048174	-	96	94.470	ENSRNOG00000000888	Sbds	87	94.470	Rattus_norvegicus
ENSPTRG00000048174	-	96	97.235	ENSRBIG00000035557	SBDS	87	97.235	Rhinopithecus_bieti
ENSPTRG00000048174	-	98	80.000	ENSRROG00000041986	-	88	78.182	Rhinopithecus_roxellana
ENSPTRG00000048174	-	96	97.235	ENSRROG00000040842	-	87	97.235	Rhinopithecus_roxellana
ENSPTRG00000048174	-	88	46.269	YLR022C	-	71	49.718	Saccharomyces_cerevisiae
ENSPTRG00000048174	-	88	95.980	ENSSBOG00000022460	SBDS	86	95.980	Saimiri_boliviensis_boliviensis
ENSPTRG00000048174	-	96	79.263	ENSSHAG00000010263	SBDS	87	79.263	Sarcophilus_harrisii
ENSPTRG00000048174	-	96	82.949	ENSSFOG00015001108	sbds	87	82.949	Scleropages_formosus
ENSPTRG00000048174	-	93	83.732	ENSSMAG00000020506	sbds	84	83.732	Scophthalmus_maximus
ENSPTRG00000048174	-	96	80.645	ENSSDUG00000001528	sbds	87	80.645	Seriola_dumerili
ENSPTRG00000048174	-	96	81.106	ENSSLDG00000003659	sbds	87	81.106	Seriola_lalandi_dorsalis
ENSPTRG00000048174	-	63	98.837	ENSSARG00000001899	-	57	98.837	Sorex_araneus
ENSPTRG00000048174	-	68	98.693	ENSSARG00000013132	-	100	98.693	Sorex_araneus
ENSPTRG00000048174	-	96	84.793	ENSSPUG00000002699	SBDS	87	84.793	Sphenodon_punctatus
ENSPTRG00000048174	-	96	80.645	ENSSPAG00000016419	sbds	87	72.018	Stegastes_partitus
ENSPTRG00000048174	-	96	96.313	ENSSSCG00000007732	SBDS	87	96.313	Sus_scrofa
ENSPTRG00000048174	-	59	84.848	ENSTGUG00000003426	SBDS	80	84.848	Taeniopygia_guttata
ENSPTRG00000048174	-	96	80.645	ENSTRUG00000021443	sbds	87	80.645	Takifugu_rubripes
ENSPTRG00000048174	-	96	79.724	ENSTNIG00000019000	sbds	87	79.724	Tetraodon_nigroviridis
ENSPTRG00000048174	-	92	84.135	ENSTBEG00000001178	SBDS	100	84.135	Tupaia_belangeri
ENSPTRG00000048174	-	96	74.654	ENSTTRG00000003921	SBDS	87	74.654	Tursiops_truncatus
ENSPTRG00000048174	-	96	95.853	ENSUAMG00000001326	SBDS	87	95.853	Ursus_americanus
ENSPTRG00000048174	-	96	95.853	ENSUMAG00000015353	SBDS	87	95.853	Ursus_maritimus
ENSPTRG00000048174	-	96	96.313	ENSVVUG00000016478	SBDS	87	96.313	Vulpes_vulpes
ENSPTRG00000048174	-	96	83.410	ENSXETG00000010093	sbds	87	83.410	Xenopus_tropicalis
ENSPTRG00000048174	-	94	78.704	ENSXCOG00000010639	sbds	96	78.704	Xiphophorus_couchianus
ENSPTRG00000048174	-	94	78.704	ENSXMAG00000006065	sbds	96	78.704	Xiphophorus_maculatus