EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTRG00000048466 (Gene tree)
Gene ID
461308
Gene Symbol
-
Alias
-
Full Name
signal recognition particle 72
Gene Type
protein_coding
Species
Pan_troglodytes
Status
putative
Strand
Minus strand
Length
36827 bases
Position
chr4:74082238-74119064
Accession
461308
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTRP00000071707SRP72PF08492.121.9e-2211
ENSPTRP00000076850SRP72PF08492.126.5e-2211
ENSPTRP00000075016SRP72PF08492.127.3e-2211
ENSPTRP00000091695SRP72PF08492.121.5e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTRT00000084897-1833-ENSPTRP00000076850610 (aa)-A0A2I3SIZ1
ENSPTRT00000096674-4580XM_001139671ENSPTRP00000075016671 (aa)XP_001139671K7CCE7
ENSPTRT00000108767-2019-ENSPTRP00000071707672 (aa)-A0A2I3S3Y1
ENSPTRT00000098617-678-ENSPTRP00000091695225 (aa)-A0A2I3TRV1
Gene Model
Click here to download ENSPTRG00000048466's gene model file
Pathways
Pathway IDPathway NameSource
ptr03060Protein exportKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000048466's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTRG00000048466-10072.263ENSPTRG00000048100-9972.701
ENSPTRG00000048466-8278.804ENSPTRG00000043609-9575.543
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTRG00000048466-100100.000ENSG00000174780SRP72100100.000Homo_sapiens
ENSPTRG00000048466-9976.480ENSAPOG00000019438srp729776.351Acanthochromis_polyacanthus
ENSPTRG00000048466-10098.361ENSAMEG00000008469SRP729998.361Ailuropoda_melanoleuca
ENSPTRG00000048466-9976.269ENSACIG00000000488srp729776.147Amphilophus_citrinellus
ENSPTRG00000048466-10077.198ENSAOCG00000011256srp729877.099Amphiprion_ocellaris
ENSPTRG00000048466-10076.900ENSAPEG00000001512srp729876.794Amphiprion_percula
ENSPTRG00000048466-9973.026ENSATEG00000006781srp729978.013Anabas_testudineus
ENSPTRG00000048466-9885.000ENSAPLG00000008751SRP729685.248Anas_platyrhynchos
ENSPTRG00000048466-9686.090ENSACAG00000002381SRP729685.496Anolis_carolinensis
ENSPTRG00000048466-10097.541ENSANAG00000020836-10097.541Aotus_nancymaae
ENSPTRG00000048466-9976.946ENSACLG00000014617srp729776.840Astatotilapia_calliptera
ENSPTRG00000048466-9777.370ENSAMXG00000004011srp729777.489Astyanax_mexicanus
ENSPTRG00000048466-10097.466ENSBTAG00000010593SRP7210097.466Bos_taurus
ENSPTRG00000048466-10097.778ENSCJAG00000017998SRP7210097.778Callithrix_jacchus
ENSPTRG00000048466-10098.808ENSCAFG00000002244SRP7210098.808Canis_familiaris
ENSPTRG00000048466-10098.689ENSCAFG00020027338SRP7210098.689Canis_lupus_dingo
ENSPTRG00000048466-10096.509ENSCHIG00000021465SRP729895.282Capra_hircus
ENSPTRG00000048466-10099.111ENSTSYG00000010571-10099.111Carlito_syrichta
ENSPTRG00000048466-10097.778ENSCAPG00000016668SRP7210097.778Cavia_aperea
ENSPTRG00000048466-10098.361ENSCPOG00000000218SRP7210098.361Cavia_porcellus
ENSPTRG00000048466-5085.841ENSCCAG00000031330-10078.244Cebus_capucinus
ENSPTRG00000048466-10098.222ENSCCAG00000030683-10098.222Cebus_capucinus
ENSPTRG00000048466-9995.946ENSCCAG00000030830-9995.946Cebus_capucinus
ENSPTRG00000048466-10099.553ENSCATG00000008072SRP7210099.553Cercocebus_atys
ENSPTRG00000048466-9778.834ENSCATG00000045359-9578.737Cercocebus_atys
ENSPTRG00000048466-10097.990ENSCLAG00000003571SRP7210097.990Chinchilla_lanigera
ENSPTRG00000048466-9893.893ENSCSAG00000005079SRP729893.893Chlorocebus_sabaeus
ENSPTRG00000048466-9099.153ENSCHOG00000013240SRP729099.153Choloepus_hoffmanni
ENSPTRG00000048466-9686.936ENSCPBG00000015015SRP729886.128Chrysemys_picta_bellii
ENSPTRG00000048466-9440.881ENSCING00000002417-9541.489Ciona_intestinalis
ENSPTRG00000048466-9441.743ENSCSAVG00000011288-9940.541Ciona_savignyi
ENSPTRG00000048466-10099.553ENSCANG00000041709SRP7210099.553Colobus_angolensis_palliatus
ENSPTRG00000048466-9278.884ENSCANG00000037920-9881.356Colobus_angolensis_palliatus
ENSPTRG00000048466-10097.466ENSCGRG00001013548Srp7210097.466Cricetulus_griseus_chok1gshd
ENSPTRG00000048466-9497.319ENSCGRG00000003013Srp729997.319Cricetulus_griseus_crigri
ENSPTRG00000048466-9977.246ENSCSEG00000003616srp729777.454Cynoglossus_semilaevis
ENSPTRG00000048466-9177.997ENSCVAG00000001520srp729977.997Cyprinodon_variegatus
ENSPTRG00000048466-8577.193ENSDARG00000014139srp729777.296Danio_rerio
ENSPTRG00000048466-9892.237ENSDNOG00000039012SRP728192.390Dasypus_novemcinctus
ENSPTRG00000048466-9996.866ENSDORG00000000171Srp729996.866Dipodomys_ordii
ENSPTRG00000048466-9240.931FBgn0038810Srp729440.931Drosophila_melanogaster
ENSPTRG00000048466-10096.726ENSETEG00000005191SRP7210096.726Echinops_telfairi
ENSPTRG00000048466-9151.037ENSEBUG00000003696srp729661.633Eptatretus_burgeri
ENSPTRG00000048466-10098.659ENSEASG00005017747SRP7210098.659Equus_asinus_asinus
ENSPTRG00000048466-10098.510ENSECAG00000006920SRP7210098.510Equus_caballus
ENSPTRG00000048466-9975.744ENSELUG00000022415srp729775.920Esox_lucius
ENSPTRG00000048466-10098.065ENSFCAG00000027600SRP7210098.065Felis_catus
ENSPTRG00000048466-9687.403ENSFALG00000006713SRP729786.239Ficedula_albicollis
ENSPTRG00000048466-10097.615ENSFDAG00000002014-10097.615Fukomys_damarensis
ENSPTRG00000048466-9767.285ENSFDAG00000009793-9566.273Fukomys_damarensis
ENSPTRG00000048466-8876.382ENSFDAG00000012897-9676.382Fukomys_damarensis
ENSPTRG00000048466-9975.744ENSFHEG00000017652srp729076.220Fundulus_heteroclitus
ENSPTRG00000048466-9772.881ENSGMOG00000005986srp729673.344Gadus_morhua
ENSPTRG00000048466-9687.227ENSGALG00000011403SRP729886.585Gallus_gallus
ENSPTRG00000048466-9976.831ENSGAFG00000017762srp729777.006Gambusia_affinis
ENSPTRG00000048466-9975.149ENSGACG00000016749srp729775.762Gasterosteus_aculeatus
ENSPTRG00000048466-9384.332ENSGAGG00000024611SRP729686.874Gopherus_agassizii
ENSPTRG00000048466-10099.405ENSGGOG00000013234-10099.405Gorilla_gorilla
ENSPTRG00000048466-9977.096ENSHBUG00000020723srp729776.994Haplochromis_burtoni
ENSPTRG00000048466-9891.908ENSHGLG00000005029-9891.450Heterocephalus_glaber_female
ENSPTRG00000048466-9774.046ENSHGLG00000018597-9774.390Heterocephalus_glaber_female
ENSPTRG00000048466-9689.352ENSHGLG00000010633-9889.247Heterocephalus_glaber_female
ENSPTRG00000048466-8693.450ENSHGLG00000003950-9793.450Heterocephalus_glaber_female
ENSPTRG00000048466-9263.675ENSHGLG00000003496-9777.647Heterocephalus_glaber_female
ENSPTRG00000048466-10098.063ENSHGLG00000009791SRP7210098.063Heterocephalus_glaber_female
ENSPTRG00000048466-10098.063ENSHGLG00100009021SRP7210098.063Heterocephalus_glaber_male
ENSPTRG00000048466-9891.908ENSHGLG00100011236-9891.450Heterocephalus_glaber_male
ENSPTRG00000048466-9780.100ENSHGLG00100009346-9779.933Heterocephalus_glaber_male
ENSPTRG00000048466-6074.545ENSHGLG00100006071-10080.075Heterocephalus_glaber_male
ENSPTRG00000048466-8693.013ENSHGLG00100017133-9793.013Heterocephalus_glaber_male
ENSPTRG00000048466-9976.912ENSHCOG00000013760srp729776.959Hippocampus_comes
ENSPTRG00000048466-9976.612ENSIPUG00000000210srp729776.498Ictalurus_punctatus
ENSPTRG00000048466-10098.808ENSSTOG00000007305SRP7210098.808Ictidomys_tridecemlineatus
ENSPTRG00000048466-10096.731ENSJJAG00000018324Srp7210096.731Jaculus_jaculus
ENSPTRG00000048466-9975.934ENSKMAG00000003776srp729776.037Kryptolebias_marmoratus
ENSPTRG00000048466-9778.988ENSLOCG00000002628srp729779.109Lepisosteus_oculatus
ENSPTRG00000048466-10097.765ENSLAFG00000018307SRP7210097.765Loxodonta_africana
ENSPTRG00000048466-9879.604ENSMFAG00000037164-9780.062Macaca_fascicularis
ENSPTRG00000048466-10099.404ENSMFAG00000031065SRP7210099.404Macaca_fascicularis
ENSPTRG00000048466-10099.344ENSMMUG00000016368SRP7210099.344Macaca_mulatta
ENSPTRG00000048466-9474.167ENSMMUG00000021262-9572.160Macaca_mulatta
ENSPTRG00000048466-10099.405ENSMNEG00000038065-10099.405Macaca_nemestrina
ENSPTRG00000048466-10098.065ENSMLEG00000030140-10098.065Mandrillus_leucophaeus
ENSPTRG00000048466-9976.453ENSMAMG00000014989srp728776.336Mastacembelus_armatus
ENSPTRG00000048466-9978.841ENSMZEG00005003325srp729776.994Maylandia_zebra
ENSPTRG00000048466-9583.150ENSMGAG00000008567SRP729786.947Meleagris_gallopavo
ENSPTRG00000048466-10097.768ENSMAUG00000001237Srp7210097.768Mesocricetus_auratus
ENSPTRG00000048466-9996.572ENSMICG00000008507-9996.572Microcebus_murinus
ENSPTRG00000048466-10097.377ENSMOCG00000020309Srp7210097.377Microtus_ochrogaster
ENSPTRG00000048466-9974.850ENSMMOG00000002627srp729775.307Mola_mola
ENSPTRG00000048466-9588.119ENSMODG00000020697SRP729886.718Monodelphis_domestica
ENSPTRG00000048466-9976.048ENSMALG00000003747srp729776.061Monopterus_albus
ENSPTRG00000048466-10096.393MGP_CAROLIEiJ_G0027323Srp7210096.393Mus_caroli
ENSPTRG00000048466-10096.393ENSMUSG00000036323Srp7210096.393Mus_musculus
ENSPTRG00000048466-10096.405MGP_PahariEiJ_G0017103Srp7210096.405Mus_pahari
ENSPTRG00000048466-10096.393MGP_SPRETEiJ_G0028317Srp7210096.393Mus_spretus
ENSPTRG00000048466-10097.914ENSMPUG00000004828SRP7210097.914Mustela_putorius_furo
ENSPTRG00000048466-10096.741ENSMLUG00000007344SRP7210096.741Myotis_lucifugus
ENSPTRG00000048466-10096.721ENSNGAG00000012595Srp7210096.721Nannospalax_galili
ENSPTRG00000048466-9973.952ENSNBRG00000014492srp729773.773Neolamprologus_brichardi
ENSPTRG00000048466-10099.111ENSNLEG00000008806-10099.111Nomascus_leucogenys
ENSPTRG00000048466-9879.787ENSMEUG00000005164SRP728592.208Notamacropus_eugenii
ENSPTRG00000048466-9695.483ENSOPRG00000012521SRP729795.413Ochotona_princeps
ENSPTRG00000048466-9894.817ENSODEG00000012214SRP729894.817Octodon_degus
ENSPTRG00000048466-9976.900ENSONIG00000001446srp729776.794Oreochromis_niloticus
ENSPTRG00000048466-9671.429ENSOANG00000008562SRP729771.148Ornithorhynchus_anatinus
ENSPTRG00000048466-10097.615ENSOCUG00000012226SRP7210097.615Oryctolagus_cuniculus
ENSPTRG00000048466-9975.505ENSORLG00000020418srp729775.115Oryzias_latipes
ENSPTRG00000048466-9973.763ENSORLG00020009138srp729673.579Oryzias_latipes_hni
ENSPTRG00000048466-9975.000ENSORLG00015018251srp729774.501Oryzias_latipes_hsok
ENSPTRG00000048466-9974.513ENSOMEG00000022008srp729774.962Oryzias_melastigma
ENSPTRG00000048466-10097.466ENSOGAG00000003578SRP7210097.466Otolemur_garnettii
ENSPTRG00000048466-10097.765ENSOARG00000004329SRP7210097.765Ovis_aries
ENSPTRG00000048466-10069.927ENSPPAG00000011428-9970.614Pan_paniscus
ENSPTRG00000048466-100100.000ENSPPAG00000042265SRP72100100.000Pan_paniscus
ENSPTRG00000048466-7981.921ENSPPAG00000032490-9176.852Pan_paniscus
ENSPTRG00000048466-10098.212ENSPPRG00000015991SRP7210098.212Panthera_pardus
ENSPTRG00000048466-10098.212ENSPTIG00000018786SRP7210098.212Panthera_tigris_altaica
ENSPTRG00000048466-10099.553ENSPANG00000005495SRP7210099.553Papio_anubis
ENSPTRG00000048466-9477.953ENSPANG00000030230-9778.628Papio_anubis
ENSPTRG00000048466-9387.220ENSPSIG00000003003SRP729887.220Pelodiscus_sinensis
ENSPTRG00000048466-10096.439ENSPEMG00000012828-10096.439Peromyscus_maniculatus_bairdii
ENSPTRG00000048466-9059.314ENSPMAG00000008885-9258.852Petromyzon_marinus
ENSPTRG00000048466-9691.176ENSPCIG00000000732SRP729790.673Phascolarctos_cinereus
ENSPTRG00000048466-9976.831ENSPFOG00000003480srp729777.006Poecilia_formosa
ENSPTRG00000048466-9976.981ENSPLAG00000020122srp729777.160Poecilia_latipinna
ENSPTRG00000048466-9976.532ENSPMEG00000019988srp729776.698Poecilia_mexicana
ENSPTRG00000048466-10075.980ENSPREG00000006218srp729776.852Poecilia_reticulata
ENSPTRG00000048466-10099.702ENSPPYG00000014752-7899.702Pongo_abelii
ENSPTRG00000048466-10074.615ENSPPYG00000009152-9580.105Pongo_abelii
ENSPTRG00000048466-10096.572ENSPVAG00000005590SRP7210096.572Pteropus_vampyrus
ENSPTRG00000048466-9977.395ENSPNYG00000001916srp729777.301Pundamilia_nyererei
ENSPTRG00000048466-9976.981ENSPNAG00000022424srp729776.876Pygocentrus_nattereri
ENSPTRG00000048466-10094.667ENSRNOG00000002100LOC1083481809894.962Rattus_norvegicus
ENSPTRG00000048466-10097.007ENSRBIG00000042069SRP7210097.007Rhinopithecus_bieti
ENSPTRG00000048466-9976.355ENSRBIG00000029328-9875.904Rhinopithecus_bieti
ENSPTRG00000048466-10099.553ENSRROG00000035704SRP7210099.553Rhinopithecus_roxellana
ENSPTRG00000048466-6471.264ENSRROG00000042114-9778.519Rhinopithecus_roxellana
ENSPTRG00000048466-9390.836ENSSHAG00000000614SRP729887.234Sarcophilus_harrisii
ENSPTRG00000048466-9978.861ENSSFOG00015002026srp729778.802Scleropages_formosus
ENSPTRG00000048466-9975.750ENSSMAG00000007639srp729775.115Scophthalmus_maximus
ENSPTRG00000048466-9976.866ENSSDUG00000007345srp729677.523Seriola_dumerili
ENSPTRG00000048466-9976.751ENSSLDG00000021819srp729776.923Seriola_lalandi_dorsalis
ENSPTRG00000048466-10083.658ENSSARG00000005804SRP727493.158Sorex_araneus
ENSPTRG00000048466-9686.760ENSSPUG00000009740SRP729785.933Sphenodon_punctatus
ENSPTRG00000048466-9976.497ENSSPAG00000011565srp729777.147Stegastes_partitus
ENSPTRG00000048466-9994.118ENSSSCG00000008900SRP729894.207Sus_scrofa
ENSPTRG00000048466-9687.267ENSTGUG00000004767SRP729785.954Taeniopygia_guttata
ENSPTRG00000048466-9975.862ENSTRUG00000009831srp729775.883Takifugu_rubripes
ENSPTRG00000048466-9977.347ENSTNIG00000013073srp729777.252Tetraodon_nigroviridis
ENSPTRG00000048466-9090.625ENSTBEG00000007394SRP729084.746Tupaia_belangeri
ENSPTRG00000048466-9497.161ENSTTRG00000010945SRP7210097.161Tursiops_truncatus
ENSPTRG00000048466-9384.232ENSUAMG00000001701SRP7210098.421Ursus_americanus
ENSPTRG00000048466-10098.063ENSUMAG00000008151SRP7210098.063Ursus_maritimus
ENSPTRG00000048466-10097.733ENSVPAG00000000458SRP7210097.733Vicugna_pacos
ENSPTRG00000048466-10098.659ENSVVUG00000006020SRP7210098.659Vulpes_vulpes
ENSPTRG00000048466-9579.278ENSXETG00000010205srp729778.905Xenopus_tropicalis
ENSPTRG00000048466-10072.889ENSXCOG00000015488srp729173.039Xiphophorus_couchianus
ENSPTRG00000048466-9976.532ENSXMAG00000018000srp729776.805Xiphophorus_maculatus

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