EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000049088 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 13328 bases
Position: chrY:14757896-14771223
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000059123	RBM1CTR	PF08081.11	1.9e-13	1	1
ENSPTRP00000065819	RBM1CTR	PF08081.11	2.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000067537	-	1344	-	ENSPTRP00000059123	447 (aa)	-	H2RDN4
ENSPTRT00000081522	-	1410	-	ENSPTRP00000065819	469 (aa)	-	A0A2I3RMF8

Gene Model

Click here to download ENSPTRG00000049088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000049088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000049088	-	61	49.231	ENSPTRG00000052216	-	86	42.857
ENSPTRG00000049088	-	100	71.984	ENSPTRG00000043157	-	100	73.387
ENSPTRG00000049088	-	52	33.202	ENSPTRG00000003312	RBMXL2	60	34.118
ENSPTRG00000049088	-	100	71.128	ENSPTRG00000045105	-	100	71.128
ENSPTRG00000049088	-	81	50.000	ENSPTRG00000049750	-	94	48.611
ENSPTRG00000049088	-	100	71.984	ENSPTRG00000047951	-	100	73.387
ENSPTRG00000049088	-	100	75.752	ENSPTRG00000046270	-	100	75.752
ENSPTRG00000049088	-	100	75.930	ENSPTRG00000051022	-	100	75.930
ENSPTRG00000049088	-	100	74.895	ENSPTRG00000051395	-	100	74.895
ENSPTRG00000049088	-	100	78.024	ENSPTRG00000042791	-	100	78.024
ENSPTRG00000049088	-	90	44.828	ENSPTRG00000052587	RBMX	97	39.427
ENSPTRG00000049088	-	100	78.826	ENSPTRG00000047385	-	100	78.826
ENSPTRG00000049088	-	100	79.114	ENSPTRG00000046311	-	100	79.114
ENSPTRG00000049088	-	100	69.939	ENSPTRG00000050914	-	100	71.371

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000049088	-	100	75.949	ENSG00000242875	RBMY1B	100	75.949	Homo_sapiens
ENSPTRG00000049088	-	100	74.364	ENSG00000226941	RBMY1J	100	74.364	Homo_sapiens
ENSPTRG00000049088	-	100	75.949	ENSG00000244395	RBMY1D	100	75.949	Homo_sapiens
ENSPTRG00000049088	-	100	76.582	ENSG00000169800	RBMY1F	100	76.582	Homo_sapiens
ENSPTRG00000049088	-	100	75.949	ENSG00000234414	RBMY1A1	100	75.949	Homo_sapiens
ENSPTRG00000049088	-	100	75.738	ENSG00000242389	RBMY1E	100	75.738	Homo_sapiens
ENSPTRG00000049088	-	91	72.727	ENSCSAG00000018304	-	98	52.411	Chlorocebus_sabaeus
ENSPTRG00000049088	-	95	41.429	ENSCSAG00000018310	-	99	41.582	Chlorocebus_sabaeus
ENSPTRG00000049088	-	85	41.221	ENSMUSG00000096520	Gm3376	85	41.221	Mus_musculus
ENSPTRG00000049088	-	85	41.221	ENSMUSG00000093987	Gm21704	85	41.221	Mus_musculus
ENSPTRG00000049088	-	83	41.221	ENSMUSG00000094511	Gm21693	85	41.221	Mus_musculus
ENSPTRG00000049088	-	85	40.458	ENSMUSG00000102053	Gm4064	85	40.458	Mus_musculus
ENSPTRG00000049088	-	85	41.221	ENSMUSG00000095852	Gm10256	85	41.221	Mus_musculus
ENSPTRG00000049088	-	85	41.221	ENSMUSG00000093918	Gm21677	85	41.221	Mus_musculus
ENSPTRG00000049088	-	85	41.221	ENSMUSG00000094658	Rbmy	85	41.221	Mus_musculus
ENSPTRG00000049088	-	85	41.221	ENSMUSG00000095948	Gm21708	85	41.221	Mus_musculus
ENSPTRG00000049088	-	85	41.221	ENSMUSG00000091987	Gm10352	85	41.221	Mus_musculus
ENSPTRG00000049088	-	70	50.704	ENSRNOG00000060963	Rbmy1j	81	44.860	Rattus_norvegicus
ENSPTRG00000049088	-	93	54.605	ENSRBIG00000029066	-	99	51.497	Rhinopithecus_bieti
ENSPTRG00000049088	-	99	67.797	ENSRBIG00000007617	-	99	67.797	Rhinopithecus_bieti
ENSPTRG00000049088	-	99	55.603	ENSRROG00000029740	-	99	56.448	Rhinopithecus_roxellana