EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000049727 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 1266 bases
Position: chr14:51569144-51570409
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000078631	RRM_1	PF00076.22	3.1e-25	1	2
ENSPTRP00000078631	RRM_1	PF00076.22	3.1e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000107590	-	1170	-	ENSPTRP00000078631	389 (aa)	-	A0A2I3SQ33

Gene Model

Click here to download ENSPTRG00000049727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000049727's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000049727	-	59	90.254	ENSPTRG00000001243	SF3B4	100	79.009
ENSPTRG00000049727	-	58	35.450	ENSPTRG00000013531	PABPC1L	74	35.450

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000049727	-	59	90.254	ENSG00000143368	SF3B4	97	89.189	Homo_sapiens
ENSPTRG00000049727	-	60	87.083	ENSAPOG00000017647	sf3b4	77	77.273	Acanthochromis_polyacanthus
ENSPTRG00000049727	-	59	90.254	ENSAMEG00000010073	SF3B4	100	79.009	Ailuropoda_melanoleuca
ENSPTRG00000049727	-	58	86.147	ENSACIG00000018455	sf3b4	86	74.183	Amphilophus_citrinellus
ENSPTRG00000049727	-	60	87.083	ENSAOCG00000019801	sf3b4	77	77.273	Amphiprion_ocellaris
ENSPTRG00000049727	-	60	87.083	ENSAPEG00000010365	sf3b4	77	77.273	Amphiprion_percula
ENSPTRG00000049727	-	60	86.667	ENSATEG00000012844	sf3b4	76	77.346	Anabas_testudineus
ENSPTRG00000049727	-	60	87.029	ENSACAG00000010019	SF3B4	99	72.488	Anolis_carolinensis
ENSPTRG00000049727	-	59	90.254	ENSANAG00000031025	SF3B4	100	79.009	Aotus_nancymaae
ENSPTRG00000049727	-	60	86.250	ENSACLG00000014260	sf3b4	76	76.623	Astatotilapia_calliptera
ENSPTRG00000049727	-	60	86.667	ENSAMXG00000008282	sf3b4	78	75.873	Astyanax_mexicanus
ENSPTRG00000049727	-	59	90.254	ENSBTAG00000012495	SF3B4	100	79.009	Bos_taurus
ENSPTRG00000049727	-	52	90.000	ENSBTAG00000012793	-	91	78.919	Bos_taurus
ENSPTRG00000049727	-	62	66.265	WBGene00004723	sap-49	55	73.709	Caenorhabditis_elegans
ENSPTRG00000049727	-	58	71.084	ENSCJAG00000042351	SF3B4	100	71.084	Callithrix_jacchus
ENSPTRG00000049727	-	59	90.254	ENSCAFG00000011617	SF3B4	100	78.538	Canis_familiaris
ENSPTRG00000049727	-	59	90.254	ENSCAFG00020019775	SF3B4	100	78.538	Canis_lupus_dingo
ENSPTRG00000049727	-	94	57.178	ENSCHIG00000006654	-	95	54.545	Capra_hircus
ENSPTRG00000049727	-	59	90.254	ENSCHIG00000025663	-	100	79.009	Capra_hircus
ENSPTRG00000049727	-	59	90.254	ENSTSYG00000009295	SF3B4	100	79.009	Carlito_syrichta
ENSPTRG00000049727	-	59	90.254	ENSCPOG00000008267	SF3B4	100	78.774	Cavia_porcellus
ENSPTRG00000049727	-	76	76.025	ENSCCAG00000019823	-	95	66.256	Cebus_capucinus
ENSPTRG00000049727	-	78	83.923	ENSCCAG00000021751	-	69	84.665	Cebus_capucinus
ENSPTRG00000049727	-	59	90.254	ENSCATG00000033114	SF3B4	100	79.009	Cercocebus_atys
ENSPTRG00000049727	-	59	90.254	ENSCLAG00000015851	SF3B4	100	78.774	Chinchilla_lanigera
ENSPTRG00000049727	-	59	90.254	ENSCSAG00000018129	SF3B4	100	79.009	Chlorocebus_sabaeus
ENSPTRG00000049727	-	60	87.448	ENSCPBG00000008041	SF3B4	100	73.508	Chrysemys_picta_bellii
ENSPTRG00000049727	-	54	81.395	ENSCING00000002337	-	89	60.997	Ciona_intestinalis
ENSPTRG00000049727	-	59	90.254	ENSCANG00000035579	SF3B4	100	79.009	Colobus_angolensis_palliatus
ENSPTRG00000049727	-	59	90.254	ENSCGRG00001003590	Sf3b4	100	79.009	Cricetulus_griseus_chok1gshd
ENSPTRG00000049727	-	59	90.254	ENSCGRG00000016914	Sf3b4	100	79.009	Cricetulus_griseus_crigri
ENSPTRG00000049727	-	57	88.546	ENSCSEG00000015258	sf3b4	65	77.419	Cynoglossus_semilaevis
ENSPTRG00000049727	-	59	84.388	ENSCVAG00000005536	sf3b4	79	72.347	Cyprinodon_variegatus
ENSPTRG00000049727	-	60	86.667	ENSDARG00000018574	sf3b4	78	76.433	Danio_rerio
ENSPTRG00000049727	-	97	62.005	ENSDNOG00000037231	-	100	67.157	Dasypus_novemcinctus
ENSPTRG00000049727	-	57	85.526	ENSDNOG00000048908	-	99	76.202	Dasypus_novemcinctus
ENSPTRG00000049727	-	59	90.254	ENSDORG00000016366	Sf3b4	100	79.009	Dipodomys_ordii
ENSPTRG00000049727	-	59	80.932	ENSETEG00000008963	SF3B4	100	72.642	Echinops_telfairi
ENSPTRG00000049727	-	59	90.254	ENSEASG00005001477	SF3B4	100	79.009	Equus_asinus_asinus
ENSPTRG00000049727	-	59	90.254	ENSECAG00000024737	SF3B4	100	79.009	Equus_caballus
ENSPTRG00000049727	-	60	87.500	ENSELUG00000012876	sf3b4	75	78.618	Esox_lucius
ENSPTRG00000049727	-	59	90.254	ENSFCAG00000010106	SF3B4	100	79.009	Felis_catus
ENSPTRG00000049727	-	59	90.254	ENSFDAG00000009286	SF3B4	100	78.774	Fukomys_damarensis
ENSPTRG00000049727	-	81	69.375	ENSGMOG00000002519	sf3b4	86	74.333	Gadus_morhua
ENSPTRG00000049727	-	60	87.029	ENSGALG00000013352	SF3B4	100	71.631	Gallus_gallus
ENSPTRG00000049727	-	66	84.291	ENSGAFG00000010181	sf3b4	78	76.948	Gambusia_affinis
ENSPTRG00000049727	-	53	89.573	ENSGACG00000003819	sf3b4	76	75.329	Gasterosteus_aculeatus
ENSPTRG00000049727	-	60	87.448	ENSGAGG00000025055	SF3B4	88	73.508	Gopherus_agassizii
ENSPTRG00000049727	-	59	90.254	ENSGGOG00000004761	SF3B4	100	79.009	Gorilla_gorilla
ENSPTRG00000049727	-	100	85.279	ENSGGOG00000038845	-	100	85.861	Gorilla_gorilla
ENSPTRG00000049727	-	60	86.250	ENSHBUG00000002028	sf3b4	76	76.623	Haplochromis_burtoni
ENSPTRG00000049727	-	59	90.254	ENSHGLG00000012360	SF3B4	100	78.774	Heterocephalus_glaber_female
ENSPTRG00000049727	-	59	90.254	ENSHGLG00100008533	SF3B4	100	79.335	Heterocephalus_glaber_male
ENSPTRG00000049727	-	53	89.202	ENSHCOG00000003014	sf3b4	76	73.026	Hippocampus_comes
ENSPTRG00000049727	-	60	87.083	ENSIPUG00000012242	Sf3b4	79	76.190	Ictalurus_punctatus
ENSPTRG00000049727	-	59	90.254	ENSSTOG00000000684	-	100	79.009	Ictidomys_tridecemlineatus
ENSPTRG00000049727	-	72	65.217	ENSSTOG00000029627	-	69	65.552	Ictidomys_tridecemlineatus
ENSPTRG00000049727	-	58	70.139	ENSJJAG00000022500	Sf3b4	95	70.815	Jaculus_jaculus
ENSPTRG00000049727	-	59	86.498	ENSKMAG00000008154	sf3b4	78	74.026	Kryptolebias_marmoratus
ENSPTRG00000049727	-	58	87.931	ENSLBEG00000026818	sf3b4	76	74.593	Labrus_bergylta
ENSPTRG00000049727	-	57	87.719	ENSLACG00000004436	SF3B4	89	75.776	Latimeria_chalumnae
ENSPTRG00000049727	-	58	87.500	ENSLOCG00000009048	sf3b4	76	75.701	Lepisosteus_oculatus
ENSPTRG00000049727	-	78	84.615	ENSLAFG00000008531	SF3B4	100	78.588	Loxodonta_africana
ENSPTRG00000049727	-	59	90.254	ENSMFAG00000042395	SF3B4	100	79.009	Macaca_fascicularis
ENSPTRG00000049727	-	76	79.730	ENSMFAG00000039067	-	76	79.931	Macaca_fascicularis
ENSPTRG00000049727	-	59	90.254	ENSMMUG00000007256	SF3B4	100	79.009	Macaca_mulatta
ENSPTRG00000049727	-	59	90.254	ENSMNEG00000031839	SF3B4	100	79.009	Macaca_nemestrina
ENSPTRG00000049727	-	76	79.392	ENSMNEG00000031526	-	76	79.585	Macaca_nemestrina
ENSPTRG00000049727	-	59	90.254	ENSMLEG00000038667	SF3B4	100	79.009	Mandrillus_leucophaeus
ENSPTRG00000049727	-	60	87.500	ENSMAMG00000014692	sf3b4	77	77.023	Mastacembelus_armatus
ENSPTRG00000049727	-	60	86.250	ENSMZEG00005026741	sf3b4	76	76.623	Maylandia_zebra
ENSPTRG00000049727	-	60	87.029	ENSMGAG00000000653	SF3B4	100	71.564	Meleagris_gallopavo
ENSPTRG00000049727	-	59	90.254	ENSMAUG00000015266	Sf3b4	100	79.009	Mesocricetus_auratus
ENSPTRG00000049727	-	59	90.254	ENSMICG00000044961	SF3B4	100	79.009	Microcebus_murinus
ENSPTRG00000049727	-	59	90.254	ENSMOCG00000013658	-	100	79.009	Microtus_ochrogaster
ENSPTRG00000049727	-	91	71.859	ENSMOCG00000014155	-	100	78.218	Microtus_ochrogaster
ENSPTRG00000049727	-	58	87.826	ENSMMOG00000018032	sf3b4	66	81.992	Mola_mola
ENSPTRG00000049727	-	59	90.254	ENSMODG00000018767	SF3B4	100	78.538	Monodelphis_domestica
ENSPTRG00000049727	-	57	87.665	ENSMALG00000006174	sf3b4	76	74.757	Monopterus_albus
ENSPTRG00000049727	-	59	90.254	MGP_CAROLIEiJ_G0025365	Sf3b4	100	78.774	Mus_caroli
ENSPTRG00000049727	-	59	90.254	ENSMUSG00000068856	Sf3b4	100	79.009	Mus_musculus
ENSPTRG00000049727	-	59	90.254	MGP_PahariEiJ_G0026809	Sf3b4	100	79.009	Mus_pahari
ENSPTRG00000049727	-	59	90.254	MGP_SPRETEiJ_G0026309	Sf3b4	100	79.009	Mus_spretus
ENSPTRG00000049727	-	59	90.254	ENSMPUG00000005563	SF3B4	100	79.009	Mustela_putorius_furo
ENSPTRG00000049727	-	59	89.831	ENSMLUG00000010789	SF3B4	100	78.774	Myotis_lucifugus
ENSPTRG00000049727	-	78	84.877	ENSNGAG00000016337	Sf3b4	100	78.774	Nannospalax_galili
ENSPTRG00000049727	-	60	86.667	ENSNBRG00000013865	sf3b4	76	76.623	Neolamprologus_brichardi
ENSPTRG00000049727	-	100	71.971	ENSNLEG00000000537	-	100	74.209	Nomascus_leucogenys
ENSPTRG00000049727	-	51	93.103	ENSMEUG00000003272	SF3B4	78	89.634	Notamacropus_eugenii
ENSPTRG00000049727	-	57	85.965	ENSOPRG00000010808	SF3B4	99	77.197	Ochotona_princeps
ENSPTRG00000049727	-	100	56.553	ENSODEG00000008916	-	84	66.254	Octodon_degus
ENSPTRG00000049727	-	59	85.654	ENSONIG00000002730	sf3b4	76	75.000	Oreochromis_niloticus
ENSPTRG00000049727	-	99	48.712	ENSOANG00000004768	-	50	72.222	Ornithorhynchus_anatinus
ENSPTRG00000049727	-	59	90.254	ENSOCUG00000004614	SF3B4	100	79.009	Oryctolagus_cuniculus
ENSPTRG00000049727	-	58	87.069	ENSORLG00000003062	sf3b4	79	72.611	Oryzias_latipes
ENSPTRG00000049727	-	58	87.069	ENSORLG00020000687	sf3b4	77	72.611	Oryzias_latipes_hni
ENSPTRG00000049727	-	58	87.069	ENSORLG00015010989	sf3b4	77	75.563	Oryzias_latipes_hsok
ENSPTRG00000049727	-	58	87.069	ENSOMEG00000013694	sf3b4	77	77.049	Oryzias_melastigma
ENSPTRG00000049727	-	59	90.254	ENSOGAG00000006265	SF3B4	100	79.009	Otolemur_garnettii
ENSPTRG00000049727	-	59	90.254	ENSOARG00000020718	-	100	79.009	Ovis_aries
ENSPTRG00000049727	-	77	70.938	ENSOARG00000007368	-	77	69.470	Ovis_aries
ENSPTRG00000049727	-	59	90.254	ENSPPAG00000040904	SF3B4	100	79.009	Pan_paniscus
ENSPTRG00000049727	-	100	96.742	ENSPPAG00000030024	-	100	96.742	Pan_paniscus
ENSPTRG00000049727	-	59	90.254	ENSPPRG00000007384	SF3B4	100	79.009	Panthera_pardus
ENSPTRG00000049727	-	59	90.254	ENSPTIG00000014530	SF3B4	100	79.245	Panthera_tigris_altaica
ENSPTRG00000049727	-	59	90.254	ENSPANG00000005126	SF3B4	100	79.009	Papio_anubis
ENSPTRG00000049727	-	58	87.554	ENSPKIG00000020669	sf3b4	83	74.921	Paramormyrops_kingsleyae
ENSPTRG00000049727	-	66	73.864	ENSPSIG00000009565	SF3B4	88	72.727	Pelodiscus_sinensis
ENSPTRG00000049727	-	59	90.254	ENSPEMG00000017568	Sf3b4	100	79.009	Peromyscus_maniculatus_bairdii
ENSPTRG00000049727	-	53	85.446	ENSPMAG00000007842	-	74	69.279	Petromyzon_marinus
ENSPTRG00000049727	-	59	90.254	ENSPCIG00000008765	SF3B4	100	78.538	Phascolarctos_cinereus
ENSPTRG00000049727	-	59	85.654	ENSPFOG00000005754	sf3b4	78	74.351	Poecilia_formosa
ENSPTRG00000049727	-	59	85.654	ENSPLAG00000001401	sf3b4	85	73.955	Poecilia_latipinna
ENSPTRG00000049727	-	59	85.654	ENSPREG00000011076	sf3b4	80	70.552	Poecilia_reticulata
ENSPTRG00000049727	-	52	86.058	ENSPCAG00000000392	SF3B4	50	86.058	Procavia_capensis
ENSPTRG00000049727	-	59	90.254	ENSPCOG00000015399	SF3B4	100	79.009	Propithecus_coquereli
ENSPTRG00000049727	-	59	90.254	ENSPVAG00000014171	SF3B4	100	79.009	Pteropus_vampyrus
ENSPTRG00000049727	-	60	86.250	ENSPNYG00000012700	sf3b4	76	76.623	Pundamilia_nyererei
ENSPTRG00000049727	-	60	87.083	ENSPNAG00000000686	sf3b4	99	67.332	Pygocentrus_nattereri
ENSPTRG00000049727	-	59	90.254	ENSRNOG00000021181	Sf3b4	100	79.009	Rattus_norvegicus
ENSPTRG00000049727	-	59	90.254	ENSRBIG00000043392	SF3B4	100	79.009	Rhinopithecus_bieti
ENSPTRG00000049727	-	95	68.123	ENSRROG00000028213	-	99	69.110	Rhinopithecus_roxellana
ENSPTRG00000049727	-	59	90.254	ENSRROG00000029366	SF3B4	100	79.009	Rhinopithecus_roxellana
ENSPTRG00000049727	-	74	71.704	ENSSBOG00000025174	-	72	72.381	Saimiri_boliviensis_boliviensis
ENSPTRG00000049727	-	59	90.254	ENSSBOG00000012310	-	100	79.009	Saimiri_boliviensis_boliviensis
ENSPTRG00000049727	-	59	86.017	ENSSHAG00000004043	SF3B4	100	77.165	Sarcophilus_harrisii
ENSPTRG00000049727	-	59	86.920	ENSSFOG00015008864	sf3b4	77	74.603	Scleropages_formosus
ENSPTRG00000049727	-	60	87.083	ENSSMAG00000006837	sf3b4	77	76.948	Scophthalmus_maximus
ENSPTRG00000049727	-	60	87.500	ENSSDUG00000012064	sf3b4	76	76.699	Seriola_dumerili
ENSPTRG00000049727	-	60	87.500	ENSSLDG00000014226	sf3b4	76	76.699	Seriola_lalandi_dorsalis
ENSPTRG00000049727	-	61	85.714	ENSSPUG00000001028	SF3B4	99	61.395	Sphenodon_punctatus
ENSPTRG00000049727	-	60	87.917	ENSSPAG00000019219	sf3b4	76	77.346	Stegastes_partitus
ENSPTRG00000049727	-	78	84.877	ENSSSCG00000006665	-	100	78.774	Sus_scrofa
ENSPTRG00000049727	-	80	64.744	ENSSSCG00000039440	-	79	60.191	Sus_scrofa
ENSPTRG00000049727	-	59	87.288	ENSTGUG00000004470	SF3B4	96	79.468	Taeniopygia_guttata
ENSPTRG00000049727	-	57	86.784	ENSTRUG00000004516	sf3b4	74	75.758	Takifugu_rubripes
ENSPTRG00000049727	-	58	86.957	ENSTNIG00000009156	sf3b4	75	75.748	Tetraodon_nigroviridis
ENSPTRG00000049727	-	59	90.254	ENSTTRG00000005217	SF3B4	100	79.009	Tursiops_truncatus
ENSPTRG00000049727	-	59	90.254	ENSUAMG00000022468	SF3B4	100	79.009	Ursus_americanus
ENSPTRG00000049727	-	59	90.254	ENSUMAG00000003802	SF3B4	100	79.147	Ursus_maritimus
ENSPTRG00000049727	-	56	90.625	ENSVPAG00000008152	SF3B4	100	79.369	Vicugna_pacos
ENSPTRG00000049727	-	59	90.254	ENSVVUG00000007732	-	94	75.844	Vulpes_vulpes
ENSPTRG00000049727	-	58	87.879	ENSVVUG00000022697	-	54	88.716	Vulpes_vulpes
ENSPTRG00000049727	-	58	83.691	ENSXETG00000011038	sf3b4	75	72.945	Xenopus_tropicalis
ENSPTRG00000049727	-	58	87.391	ENSXCOG00000019895	sf3b4	78	75.000	Xiphophorus_couchianus
ENSPTRG00000049727	-	58	87.391	ENSXMAG00000003772	sf3b4	78	75.000	Xiphophorus_maculatus