EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000050159 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 354 bases
Position: chr1:43633756-43634109
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000072008	LSM	PF01423.22	1.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000077295	-	354	-	ENSPTRP00000072008	117 (aa)	-	A0A2I3S590

Gene Model

Click here to download ENSPTRG00000050159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000050159's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000050159	-	87	94.118	ENSPTRG00000009909	SNRPD1	86	94.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000050159	-	87	94.118	ENSG00000167088	SNRPD1	86	94.118	Homo_sapiens
ENSPTRG00000050159	-	87	90.196	ENSAPOG00000019446	snrpd1	56	90.196	Acanthochromis_polyacanthus
ENSPTRG00000050159	-	85	92.000	ENSAMEG00000002576	SNRPD1	85	92.000	Ailuropoda_melanoleuca
ENSPTRG00000050159	-	81	89.474	ENSACIG00000011263	snrpd1	85	89.474	Amphilophus_citrinellus
ENSPTRG00000050159	-	87	90.196	ENSAOCG00000007406	snrpd1	86	90.196	Amphiprion_ocellaris
ENSPTRG00000050159	-	87	86.275	ENSAPEG00000014961	snrpd1	85	86.275	Amphiprion_percula
ENSPTRG00000050159	-	81	89.474	ENSAPEG00000012539	SNRPD1	85	89.474	Amphiprion_percula
ENSPTRG00000050159	-	87	90.196	ENSATEG00000014399	snrpd1	86	90.196	Anabas_testudineus
ENSPTRG00000050159	-	84	93.878	ENSAPLG00000012256	SNRPD1	82	93.878	Anas_platyrhynchos
ENSPTRG00000050159	-	87	94.118	ENSACAG00000006364	SNRPD1	86	94.118	Anolis_carolinensis
ENSPTRG00000050159	-	87	94.118	ENSANAG00000025641	SNRPD1	86	94.118	Aotus_nancymaae
ENSPTRG00000050159	-	81	89.474	ENSACLG00000017406	snrpd1	85	89.474	Astatotilapia_calliptera
ENSPTRG00000050159	-	87	91.176	ENSAMXG00000004589	snrpd1	86	91.176	Astyanax_mexicanus
ENSPTRG00000050159	-	85	89.000	ENSBTAG00000055316	-	86	89.000	Bos_taurus
ENSPTRG00000050159	-	82	91.667	ENSBTAG00000012376	-	72	91.667	Bos_taurus
ENSPTRG00000050159	-	87	90.196	ENSBTAG00000047266	-	86	90.196	Bos_taurus
ENSPTRG00000050159	-	87	94.118	ENSBTAG00000008292	SNRPD1	86	94.118	Bos_taurus
ENSPTRG00000050159	-	75	76.136	WBGene00004916	snr-3	76	71.875	Caenorhabditis_elegans
ENSPTRG00000050159	-	87	94.118	ENSCJAG00000042955	SNRPD1	86	94.118	Callithrix_jacchus
ENSPTRG00000050159	-	87	94.118	ENSCAFG00000018247	SNRPD1	86	94.118	Canis_familiaris
ENSPTRG00000050159	-	81	93.684	ENSCAFG00020015914	SNRPD1	74	93.684	Canis_lupus_dingo
ENSPTRG00000050159	-	87	91.176	ENSCHIG00000005557	SNRPD1	84	93.000	Capra_hircus
ENSPTRG00000050159	-	87	94.118	ENSTSYG00000030028	SNRPD1	86	94.118	Carlito_syrichta
ENSPTRG00000050159	-	84	92.857	ENSCAPG00000008103	SNRPD1	84	92.857	Cavia_aperea
ENSPTRG00000050159	-	87	94.118	ENSCPOG00000004679	SNRPD1	86	94.118	Cavia_porcellus
ENSPTRG00000050159	-	87	92.157	ENSCCAG00000005390	-	86	92.157	Cebus_capucinus
ENSPTRG00000050159	-	87	90.196	ENSCCAG00000016652	-	86	90.196	Cebus_capucinus
ENSPTRG00000050159	-	87	94.118	ENSCCAG00000032658	SNRPD1	86	94.118	Cebus_capucinus
ENSPTRG00000050159	-	87	93.137	ENSCCAG00000020611	-	86	93.137	Cebus_capucinus
ENSPTRG00000050159	-	87	94.118	ENSCATG00000039978	SNRPD1	86	94.118	Cercocebus_atys
ENSPTRG00000050159	-	87	94.118	ENSCLAG00000008691	SNRPD1	86	94.118	Chinchilla_lanigera
ENSPTRG00000050159	-	87	94.118	ENSCSAG00000017654	SNRPD1	86	94.118	Chlorocebus_sabaeus
ENSPTRG00000050159	-	87	94.118	ENSCPBG00000023143	SNRPD1	86	94.118	Chrysemys_picta_bellii
ENSPTRG00000050159	-	74	82.558	ENSCING00000024100	-	69	82.558	Ciona_intestinalis
ENSPTRG00000050159	-	74	80.460	ENSCSAVG00000004578	-	70	80.460	Ciona_savignyi
ENSPTRG00000050159	-	87	94.118	ENSCGRG00001021055	-	86	94.118	Cricetulus_griseus_chok1gshd
ENSPTRG00000050159	-	89	71.154	ENSCGRG00001009945	-	93	71.154	Cricetulus_griseus_chok1gshd
ENSPTRG00000050159	-	87	94.118	ENSCGRG00000000490	-	86	94.118	Cricetulus_griseus_crigri
ENSPTRG00000050159	-	89	71.154	ENSCGRG00000006224	-	93	71.154	Cricetulus_griseus_crigri
ENSPTRG00000050159	-	87	89.216	ENSCSEG00000018141	snrpd1	86	89.216	Cynoglossus_semilaevis
ENSPTRG00000050159	-	87	90.196	ENSCVAG00000000534	snrpd1	86	90.196	Cyprinodon_variegatus
ENSPTRG00000050159	-	87	91.176	ENSDARG00000011648	snrpd1	96	89.011	Danio_rerio
ENSPTRG00000050159	-	87	94.118	ENSDNOG00000040310	SNRPD1	86	94.118	Dasypus_novemcinctus
ENSPTRG00000050159	-	87	94.118	ENSDORG00000008349	Snrpd1	86	94.118	Dipodomys_ordii
ENSPTRG00000050159	-	80	77.660	FBgn0261933	SmD1	76	77.660	Drosophila_melanogaster
ENSPTRG00000050159	-	61	95.775	ENSETEG00000011689	SNRPD1	60	95.775	Echinops_telfairi
ENSPTRG00000050159	-	87	90.196	ENSEBUG00000003170	snrpd1	93	89.362	Eptatretus_burgeri
ENSPTRG00000050159	-	81	93.684	ENSEASG00005002433	SNRPD1	85	93.684	Equus_asinus_asinus
ENSPTRG00000050159	-	81	93.684	ENSECAG00000014373	SNRPD1	85	93.684	Equus_caballus
ENSPTRG00000050159	-	76	93.258	ENSEEUG00000004987	SNRPD1	100	93.258	Erinaceus_europaeus
ENSPTRG00000050159	-	85	87.000	ENSELUG00000000088	snrpd1	79	89.362	Esox_lucius
ENSPTRG00000050159	-	87	94.118	ENSFCAG00000012352	SNRPD1	86	94.118	Felis_catus
ENSPTRG00000050159	-	81	93.684	ENSFALG00000002646	SNRPD1	85	93.684	Ficedula_albicollis
ENSPTRG00000050159	-	87	91.176	ENSGMOG00000015607	snrpd1	86	91.176	Gadus_morhua
ENSPTRG00000050159	-	87	94.118	ENSGALG00000041334	SNRPD1	86	94.118	Gallus_gallus
ENSPTRG00000050159	-	87	90.196	ENSGAFG00000011171	snrpd1	86	90.196	Gambusia_affinis
ENSPTRG00000050159	-	87	91.176	ENSGACG00000005201	SNRPD1	86	91.176	Gasterosteus_aculeatus
ENSPTRG00000050159	-	87	94.118	ENSGAGG00000011197	SNRPD1	86	94.118	Gopherus_agassizii
ENSPTRG00000050159	-	82	93.750	ENSGGOG00000026706	-	80	93.750	Gorilla_gorilla
ENSPTRG00000050159	-	87	94.118	ENSGGOG00000041053	SNRPD1	86	94.118	Gorilla_gorilla
ENSPTRG00000050159	-	87	90.196	ENSHBUG00000003236	snrpd1	86	90.196	Haplochromis_burtoni
ENSPTRG00000050159	-	87	94.118	ENSHGLG00000007152	SNRPD1	86	94.118	Heterocephalus_glaber_female
ENSPTRG00000050159	-	87	94.118	ENSHGLG00100008618	SNRPD1	86	94.118	Heterocephalus_glaber_male
ENSPTRG00000050159	-	87	90.196	ENSIPUG00000003576	snrpd1	86	90.196	Ictalurus_punctatus
ENSPTRG00000050159	-	87	94.118	ENSSTOG00000000485	SNRPD1	86	94.118	Ictidomys_tridecemlineatus
ENSPTRG00000050159	-	87	94.118	ENSJJAG00000017698	Snrpd1	86	94.118	Jaculus_jaculus
ENSPTRG00000050159	-	87	90.196	ENSKMAG00000005987	snrpd1	86	90.196	Kryptolebias_marmoratus
ENSPTRG00000050159	-	87	90.196	ENSLBEG00000003327	snrpd1	86	90.196	Labrus_bergylta
ENSPTRG00000050159	-	87	94.118	ENSLACG00000001955	SNRPD1	86	94.118	Latimeria_chalumnae
ENSPTRG00000050159	-	85	91.000	ENSLOCG00000002003	snrpd1	85	91.000	Lepisosteus_oculatus
ENSPTRG00000050159	-	86	92.079	ENSLAFG00000005819	SNRPD1	86	92.079	Loxodonta_africana
ENSPTRG00000050159	-	87	94.118	ENSMFAG00000042080	SNRPD1	86	94.118	Macaca_fascicularis
ENSPTRG00000050159	-	83	93.814	ENSMMUG00000003992	SNRPD1	83	93.814	Macaca_mulatta
ENSPTRG00000050159	-	87	94.118	ENSMNEG00000041296	SNRPD1	86	94.118	Macaca_nemestrina
ENSPTRG00000050159	-	87	94.118	ENSMLEG00000028659	SNRPD1	86	94.118	Mandrillus_leucophaeus
ENSPTRG00000050159	-	87	90.196	ENSMAMG00000012971	snrpd1	86	90.196	Mastacembelus_armatus
ENSPTRG00000050159	-	87	90.196	ENSMZEG00005004685	snrpd1	86	90.196	Maylandia_zebra
ENSPTRG00000050159	-	84	93.878	ENSMGAG00000011598	SNRPD1	81	93.878	Meleagris_gallopavo
ENSPTRG00000050159	-	82	78.125	ENSMAUG00000016502	-	86	78.125	Mesocricetus_auratus
ENSPTRG00000050159	-	82	78.125	ENSMAUG00000016467	-	86	78.125	Mesocricetus_auratus
ENSPTRG00000050159	-	83	88.660	ENSMAUG00000006829	-	59	93.333	Mesocricetus_auratus
ENSPTRG00000050159	-	87	94.118	ENSMICG00000044066	SNRPD1	86	94.118	Microcebus_murinus
ENSPTRG00000050159	-	87	94.118	ENSMOCG00000017367	Snrpd1	86	94.118	Microtus_ochrogaster
ENSPTRG00000050159	-	87	90.196	ENSMMOG00000019089	snrpd1	86	90.196	Mola_mola
ENSPTRG00000050159	-	87	94.118	ENSMODG00000021487	SNRPD1	86	94.118	Monodelphis_domestica
ENSPTRG00000050159	-	87	90.196	ENSMALG00000014459	snrpd1	86	90.196	Monopterus_albus
ENSPTRG00000050159	-	87	94.118	MGP_CAROLIEiJ_G0021994	Snrpd1	86	94.118	Mus_caroli
ENSPTRG00000050159	-	87	94.118	ENSMUSG00000002477	Snrpd1	86	94.118	Mus_musculus
ENSPTRG00000050159	-	87	94.118	MGP_PahariEiJ_G0018731	Snrpd1	86	94.118	Mus_pahari
ENSPTRG00000050159	-	87	94.118	MGP_SPRETEiJ_G0022910	Snrpd1	86	94.118	Mus_spretus
ENSPTRG00000050159	-	85	92.000	ENSMPUG00000005567	-	85	92.000	Mustela_putorius_furo
ENSPTRG00000050159	-	87	94.118	ENSMPUG00000020041	-	86	94.118	Mustela_putorius_furo
ENSPTRG00000050159	-	85	93.000	ENSMLUG00000009124	SNRPD1	78	93.000	Myotis_lucifugus
ENSPTRG00000050159	-	87	94.118	ENSNGAG00000023946	Snrpd1	86	94.118	Nannospalax_galili
ENSPTRG00000050159	-	80	89.362	ENSNBRG00000012119	snrpd1	78	89.362	Neolamprologus_brichardi
ENSPTRG00000050159	-	87	92.157	ENSNLEG00000031430	SNRPD1	85	92.157	Nomascus_leucogenys
ENSPTRG00000050159	-	87	94.118	ENSODEG00000005764	SNRPD1	86	94.118	Octodon_degus
ENSPTRG00000050159	-	87	90.196	ENSONIG00000002486	snrpd1	86	90.196	Oreochromis_niloticus
ENSPTRG00000050159	-	84	84.694	ENSOANG00000004638	-	82	84.694	Ornithorhynchus_anatinus
ENSPTRG00000050159	-	87	93.137	ENSOCUG00000014399	-	86	93.137	Oryctolagus_cuniculus
ENSPTRG00000050159	-	85	92.000	ENSOCUG00000023761	-	85	92.000	Oryctolagus_cuniculus
ENSPTRG00000050159	-	81	89.474	ENSORLG00000012516	snrpd1	85	89.474	Oryzias_latipes
ENSPTRG00000050159	-	87	90.196	ENSORLG00020005743	snrpd1	86	90.196	Oryzias_latipes_hni
ENSPTRG00000050159	-	87	90.196	ENSORLG00015013402	snrpd1	86	90.196	Oryzias_latipes_hsok
ENSPTRG00000050159	-	87	90.196	ENSOMEG00000011571	snrpd1	86	90.196	Oryzias_melastigma
ENSPTRG00000050159	-	87	90.196	ENSOGAG00000007833	SNRPD1	84	92.000	Otolemur_garnettii
ENSPTRG00000050159	-	87	94.118	ENSOARG00000003413	-	77	94.118	Ovis_aries
ENSPTRG00000050159	-	87	94.118	ENSPPAG00000042593	SNRPD1	86	94.118	Pan_paniscus
ENSPTRG00000050159	-	87	64.706	ENSPPRG00000005009	-	82	64.706	Panthera_pardus
ENSPTRG00000050159	-	87	94.118	ENSPPRG00000002399	SNRPD1	86	94.118	Panthera_pardus
ENSPTRG00000050159	-	83	93.814	ENSPTIG00000013206	SNRPD1	85	93.814	Panthera_tigris_altaica
ENSPTRG00000050159	-	87	94.118	ENSPANG00000023478	SNRPD1	86	94.118	Papio_anubis
ENSPTRG00000050159	-	87	91.176	ENSPKIG00000003985	SNRPD1	86	91.176	Paramormyrops_kingsleyae
ENSPTRG00000050159	-	81	88.421	ENSPKIG00000021610	snrpd1	85	88.421	Paramormyrops_kingsleyae
ENSPTRG00000050159	-	87	90.196	ENSPMGG00000001862	snrpd1	86	90.196	Periophthalmus_magnuspinnatus
ENSPTRG00000050159	-	87	94.118	ENSPEMG00000014773	-	86	94.118	Peromyscus_maniculatus_bairdii
ENSPTRG00000050159	-	87	80.769	ENSPMAG00000003938	-	85	80.769	Petromyzon_marinus
ENSPTRG00000050159	-	87	94.118	ENSPCIG00000020320	SNRPD1	86	94.118	Phascolarctos_cinereus
ENSPTRG00000050159	-	87	90.196	ENSPFOG00000012448	SNRPD1	90	90.196	Poecilia_formosa
ENSPTRG00000050159	-	87	90.196	ENSPLAG00000006738	snrpd1	90	90.196	Poecilia_latipinna
ENSPTRG00000050159	-	87	90.196	ENSPMEG00000021942	snrpd1	90	90.196	Poecilia_mexicana
ENSPTRG00000050159	-	87	90.196	ENSPREG00000007094	snrpd1	86	90.196	Poecilia_reticulata
ENSPTRG00000050159	-	87	94.118	ENSPPYG00000025874	SNRPD1	86	94.118	Pongo_abelii
ENSPTRG00000050159	-	87	94.118	ENSPCOG00000013327	SNRPD1	86	94.118	Propithecus_coquereli
ENSPTRG00000050159	-	87	94.118	ENSPVAG00000005511	SNRPD1	68	94.118	Pteropus_vampyrus
ENSPTRG00000050159	-	87	91.176	ENSPNAG00000017824	snrpd1	86	91.176	Pygocentrus_nattereri
ENSPTRG00000050159	-	87	94.118	ENSRNOG00000013714	Snrpd1	86	94.118	Rattus_norvegicus
ENSPTRG00000050159	-	87	94.118	ENSRBIG00000022996	SNRPD1	86	94.118	Rhinopithecus_bieti
ENSPTRG00000050159	-	87	94.118	ENSRROG00000027640	SNRPD1	86	94.118	Rhinopithecus_roxellana
ENSPTRG00000050159	-	87	94.118	ENSSBOG00000020998	SNRPD1	86	94.118	Saimiri_boliviensis_boliviensis
ENSPTRG00000050159	-	87	94.118	ENSSHAG00000011791	SNRPD1	86	94.118	Sarcophilus_harrisii
ENSPTRG00000050159	-	87	89.216	ENSSFOG00015022253	-	86	89.216	Scleropages_formosus
ENSPTRG00000050159	-	87	89.216	ENSSFOG00015008809	-	86	89.216	Scleropages_formosus
ENSPTRG00000050159	-	87	91.176	ENSSMAG00000008765	snrpd1	86	91.176	Scophthalmus_maximus
ENSPTRG00000050159	-	84	88.776	ENSSDUG00000010521	snrpd1	84	87.879	Seriola_dumerili
ENSPTRG00000050159	-	87	90.196	ENSSLDG00000011858	snrpd1	86	90.196	Seriola_lalandi_dorsalis
ENSPTRG00000050159	-	57	92.537	ENSSARG00000004271	SNRPD1	100	92.537	Sorex_araneus
ENSPTRG00000050159	-	87	94.118	ENSSPUG00000002824	SNRPD1	86	94.118	Sphenodon_punctatus
ENSPTRG00000050159	-	81	89.474	ENSSPAG00000015229	snrpd1	85	89.474	Stegastes_partitus
ENSPTRG00000050159	-	87	94.118	ENSSSCG00000003701	SNRPD1	86	94.118	Sus_scrofa
ENSPTRG00000050159	-	84	93.878	ENSTGUG00000005095	SNRPD1	82	93.878	Taeniopygia_guttata
ENSPTRG00000050159	-	81	91.579	ENSTRUG00000008977	snrpd1	85	91.579	Takifugu_rubripes
ENSPTRG00000050159	-	72	86.905	ENSTNIG00000001224	snrpd1	81	86.905	Tetraodon_nigroviridis
ENSPTRG00000050159	-	61	95.775	ENSTBEG00000013776	SNRPD1	81	95.775	Tupaia_belangeri
ENSPTRG00000050159	-	84	93.878	ENSTTRG00000002654	SNRPD1	85	93.878	Tursiops_truncatus
ENSPTRG00000050159	-	83	93.814	ENSUAMG00000013431	SNRPD1	94	93.617	Ursus_americanus
ENSPTRG00000050159	-	87	94.118	ENSUMAG00000019740	SNRPD1	86	94.118	Ursus_maritimus
ENSPTRG00000050159	-	87	94.118	ENSVPAG00000010056	SNRPD1	68	94.118	Vicugna_pacos
ENSPTRG00000050159	-	81	93.684	ENSVVUG00000004009	SNRPD1	85	93.684	Vulpes_vulpes
ENSPTRG00000050159	-	87	93.137	ENSXETG00000027354	snrpd1	86	93.137	Xenopus_tropicalis
ENSPTRG00000050159	-	87	90.196	ENSXCOG00000020108	snrpd1	86	90.196	Xiphophorus_couchianus
ENSPTRG00000050159	-	87	90.196	ENSXMAG00000003368	snrpd1	86	90.196	Xiphophorus_maculatus