EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000050558 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 508 bases
Position: chr1:135842854-135843361
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000086465	dsrm	PF00035.26	0.00025	1	1
ENSPTRP00000086465	DND1_DSRM	PF14709.7	4.4e-09	1	1
ENSPTRP00000086465	G-patch	PF01585.23	7.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000104969	-	366	-	ENSPTRP00000086465	121 (aa)	-	A0A2I3TC62

Gene Model

Click here to download ENSPTRG00000050558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000050558's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000050558	-	96	94.828	ENSPTRG00000052356	-	97	94.828

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000050558	-	94	59.649	ENSACIG00000017870	-	93	64.000	Amphilophus_citrinellus
ENSPTRG00000050558	-	93	74.336	ENSCPBG00000005420	-	94	74.336	Chrysemys_picta_bellii
ENSPTRG00000050558	-	90	64.220	ENSCSEG00000004020	-	91	64.220	Cynoglossus_semilaevis
ENSPTRG00000050558	-	79	62.500	ENSCVAG00000003298	-	97	62.500	Cyprinodon_variegatus
ENSPTRG00000050558	-	80	72.165	ENSDARG00000114730	CABZ01113192.1	92	72.165	Danio_rerio
ENSPTRG00000050558	-	89	62.963	ENSGMOG00000000602	-	91	62.963	Gadus_morhua
ENSPTRG00000050558	-	89	62.963	ENSGACG00000015357	-	91	62.963	Gasterosteus_aculeatus
ENSPTRG00000050558	-	78	62.766	ENSHCOG00000018124	-	96	62.766	Hippocampus_comes
ENSPTRG00000050558	-	80	67.010	ENSMMOG00000004648	-	78	67.010	Mola_mola
ENSPTRG00000050558	-	79	52.083	ENSNBRG00000015073	-	96	52.083	Neolamprologus_brichardi
ENSPTRG00000050558	-	95	86.207	ENSODEG00000004500	-	95	86.207	Octodon_degus
ENSPTRG00000050558	-	95	73.276	ENSODEG00000008629	-	95	73.276	Octodon_degus
ENSPTRG00000050558	-	83	63.000	ENSOMEG00000010811	-	96	63.000	Oryzias_melastigma
ENSPTRG00000050558	-	100	90.083	ENSPPAG00000035874	-	100	90.083	Pan_paniscus
ENSPTRG00000050558	-	89	63.303	ENSPNYG00000022376	-	96	63.303	Pundamilia_nyererei
ENSPTRG00000050558	-	96	94.828	ENSRBIG00000044269	-	97	94.828	Rhinopithecus_bieti
ENSPTRG00000050558	-	80	64.948	ENSSLDG00000013582	-	92	64.948	Seriola_lalandi_dorsalis
ENSPTRG00000050558	-	80	64.948	ENSXCOG00000020356	-	95	64.948	Xiphophorus_couchianus