EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000050914 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 11674 bases
Position: chrY:10849362-10861035
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000091639	RBM1CTR	PF08081.11	3.2e-13	1	1
ENSPTRP00000065432	RBM1CTR	PF08081.11	4.4e-13	1	1
ENSPTRP00000087489	RBM1CTR	PF08081.11	4.8e-13	1	1
ENSPTRP00000065432	RRM_1	PF00076.22	1.6e-20	1	1
ENSPTRP00000091639	RRM_1	PF00076.22	1.6e-20	1	1
ENSPTRP00000087489	RRM_1	PF00076.22	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000093538	-	1347	-	ENSPTRP00000091639	448 (aa)	-	A0A2I3TQW0
ENSPTRT00000106591	-	1395	-	ENSPTRP00000065432	464 (aa)	-	A0A2I3RL71
ENSPTRT00000105628	-	1479	-	ENSPTRP00000087489	492 (aa)	-	A0A2I3TE31

Gene Model

Click here to download ENSPTRG00000050914's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000050914's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000050914	-	100	93.908	ENSPTRG00000042791	-	100	93.908
ENSPTRG00000050914	-	82	55.000	ENSPTRG00000049750	-	97	56.250
ENSPTRG00000050914	-	100	93.254	ENSPTRG00000043157	-	100	93.254
ENSPTRG00000050914	-	100	88.016	ENSPTRG00000046311	-	100	88.016
ENSPTRG00000050914	-	100	93.254	ENSPTRG00000047951	-	100	93.254
ENSPTRG00000050914	-	100	94.328	ENSPTRG00000051395	-	100	94.328
ENSPTRG00000050914	-	94	55.150	ENSPTRG00000052587	RBMX	92	79.167
ENSPTRG00000050914	-	100	71.371	ENSPTRG00000049088	-	100	69.939
ENSPTRG00000050914	-	100	87.905	ENSPTRG00000046270	-	100	87.905
ENSPTRG00000050914	-	56	54.924	ENSPTRG00000034071	-	98	58.113
ENSPTRG00000050914	-	100	88.086	ENSPTRG00000047385	-	100	88.086
ENSPTRG00000050914	-	100	88.212	ENSPTRG00000051022	-	100	88.212
ENSPTRG00000050914	-	72	53.846	ENSPTRG00000052216	-	95	44.286
ENSPTRG00000050914	-	95	44.479	ENSPTRG00000003312	RBMXL2	93	51.908
ENSPTRG00000050914	-	100	93.651	ENSPTRG00000045105	-	100	93.651

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000050914	-	100	86.444	ENSG00000242875	RBMY1B	100	86.444	Homo_sapiens
ENSPTRG00000050914	-	100	86.444	ENSG00000234414	RBMY1A1	100	86.444	Homo_sapiens
ENSPTRG00000050914	-	100	86.051	ENSG00000242389	RBMY1E	100	86.051	Homo_sapiens
ENSPTRG00000050914	-	100	86.837	ENSG00000169800	RBMY1F	100	86.837	Homo_sapiens
ENSPTRG00000050914	-	100	86.837	ENSG00000226941	RBMY1J	100	86.837	Homo_sapiens
ENSPTRG00000050914	-	100	86.248	ENSG00000244395	RBMY1D	100	86.248	Homo_sapiens
ENSPTRG00000050914	-	86	79.452	ENSCSAG00000018304	-	100	64.490	Chlorocebus_sabaeus
ENSPTRG00000050914	-	99	53.292	ENSCSAG00000018310	-	100	53.704	Chlorocebus_sabaeus
ENSPTRG00000050914	-	90	41.311	ENSMUSG00000093918	Gm21677	93	39.119	Mus_musculus
ENSPTRG00000050914	-	90	41.639	ENSMUSG00000095852	Gm10256	93	39.378	Mus_musculus
ENSPTRG00000050914	-	90	41.639	ENSMUSG00000091987	Gm10352	93	39.378	Mus_musculus
ENSPTRG00000050914	-	90	41.311	ENSMUSG00000095948	Gm21708	93	39.119	Mus_musculus
ENSPTRG00000050914	-	90	42.295	ENSMUSG00000096520	Gm3376	93	39.896	Mus_musculus
ENSPTRG00000050914	-	92	39.119	ENSMUSG00000094511	Gm21693	93	39.119	Mus_musculus
ENSPTRG00000050914	-	90	41.311	ENSMUSG00000093987	Gm21704	93	39.119	Mus_musculus
ENSPTRG00000050914	-	90	41.311	ENSMUSG00000094658	Rbmy	93	39.119	Mus_musculus
ENSPTRG00000050914	-	90	41.311	ENSMUSG00000102053	Gm4064	93	39.018	Mus_musculus
ENSPTRG00000050914	-	74	45.455	ENSRNOG00000060963	Rbmy1j	84	46.875	Rattus_norvegicus
ENSPTRG00000050914	-	99	76.562	ENSRBIG00000007617	-	99	76.562	Rhinopithecus_bieti
ENSPTRG00000050914	-	98	51.073	ENSRBIG00000029066	-	100	51.073	Rhinopithecus_bieti
ENSPTRG00000050914	-	99	67.974	ENSRROG00000029740	-	99	68.211	Rhinopithecus_roxellana