EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000051168 (Gene tree)
Gene ID: 464965
Gene Symbol: SMARCA2
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 163553 bases
Position: chr9:1975931-2139483
Accession: 464965
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000072063	ResIII	PF04851.15	2.5e-08	1	1
ENSPTRP00000085105	ResIII	PF04851.15	3.7e-08	1	1
ENSPTRP00000077077	ResIII	PF04851.15	3.7e-08	1	1
ENSPTRP00000062652	ResIII	PF04851.15	3.8e-08	1	1
ENSPTRP00000072063	BRK	PF07533.16	3.9e-17	1	1
ENSPTRP00000062652	BRK	PF07533.16	4.3e-17	1	1
ENSPTRP00000085105	BRK	PF07533.16	4.3e-17	1	1
ENSPTRP00000077077	BRK	PF07533.16	4.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000095237	SMARCA2-209	738	-	ENSPTRP00000082181	245 (aa)	-	A0A2I3SYX6
ENSPTRT00000098854	SMARCA2-202	4713	-	ENSPTRP00000077077	1570 (aa)	-	A0A2I3SJ96
ENSPTRT00000108096	SMARCA2-201	4767	XM_016960529	ENSPTRP00000062652	1588 (aa)	XP_016816018	A0A2I3RDE1
ENSPTRT00000104431	SMARCA2-203	4695	-	ENSPTRP00000085105	1564 (aa)	-	A0A2I3T782
ENSPTRT00000101931	SMARCA2-206	747	-	ENSPTRP00000087825	248 (aa)	-	A0A2I3TF50
ENSPTRT00000077754	SMARCA2-204	4251	-	ENSPTRP00000072063	1416 (aa)	-	A0A2I3S5E4
ENSPTRT00000086805	SMARCA2-207	837	-	ENSPTRP00000091159	278 (aa)	-	A0A2I3TPJ1
ENSPTRT00000106017	SMARCA2-205	846	-	ENSPTRP00000083752	281 (aa)	-	A0A2J8JH03
ENSPTRT00000106187	SMARCA2-208	783	-	ENSPTRP00000090037	260 (aa)	-	A0A2I3TLC1

Gene Model

Click here to download ENSPTRG00000051168's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr04714	Thermogenesis	KEGG
ptr05225	Hepatocellular carcinoma	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000051168's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000051168	SMARCA2	92	79.204	ENSPTRG00000010488	SMARCA4	98	75.942

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000051168	SMARCA2	100	97.425	ENSG00000080503	SMARCA2	100	100.000	Homo_sapiens
ENSPTRG00000051168	SMARCA2	100	80.263	ENSAPOG00000002641	SMARCA2	97	80.090	Acanthochromis_polyacanthus
ENSPTRG00000051168	SMARCA2	98	90.473	ENSAMEG00000012325	SMARCA2	100	99.374	Ailuropoda_melanoleuca
ENSPTRG00000051168	SMARCA2	100	79.461	ENSACIG00000015607	SMARCA2	97	79.319	Amphilophus_citrinellus
ENSPTRG00000051168	SMARCA2	100	80.401	ENSAOCG00000009647	-	97	79.961	Amphiprion_ocellaris
ENSPTRG00000051168	SMARCA2	100	80.263	ENSAPEG00000007646	SMARCA2	97	79.897	Amphiprion_percula
ENSPTRG00000051168	SMARCA2	99	81.743	ENSATEG00000006916	SMARCA2	96	81.205	Anabas_testudineus
ENSPTRG00000051168	SMARCA2	98	90.638	ENSAPLG00000013873	SMARCA2	100	84.610	Anas_platyrhynchos
ENSPTRG00000051168	SMARCA2	100	90.603	ENSACAG00000002423	SMARCA2	100	90.413	Anolis_carolinensis
ENSPTRG00000051168	SMARCA2	100	97.194	ENSANAG00000026498	SMARCA2	100	97.194	Aotus_nancymaae
ENSPTRG00000051168	SMARCA2	100	80.505	ENSACLG00000004248	SMARCA2	97	80.374	Astatotilapia_calliptera
ENSPTRG00000051168	SMARCA2	100	81.880	ENSAMXG00000012404	smarca2	97	82.300	Astyanax_mexicanus
ENSPTRG00000051168	SMARCA2	100	95.825	ENSBTAG00000007494	SMARCA2	100	95.825	Bos_taurus
ENSPTRG00000051168	SMARCA2	100	99.121	ENSCJAG00000010710	SMARCA2	100	99.121	Callithrix_jacchus
ENSPTRG00000051168	SMARCA2	100	96.696	ENSCAFG00000002013	SMARCA2	100	96.696	Canis_familiaris
ENSPTRG00000051168	SMARCA2	78	94.906	ENSCAFG00020026802	SMARCA2	98	94.906	Canis_lupus_dingo
ENSPTRG00000051168	SMARCA2	100	95.872	ENSCHIG00000025863	SMARCA2	100	95.872	Capra_hircus
ENSPTRG00000051168	SMARCA2	100	96.072	ENSTSYG00000003858	SMARCA2	100	96.173	Carlito_syrichta
ENSPTRG00000051168	SMARCA2	99	92.780	ENSCAPG00000002890	SMARCA2	99	92.780	Cavia_aperea
ENSPTRG00000051168	SMARCA2	100	95.550	ENSCPOG00000005475	SMARCA2	100	94.981	Cavia_porcellus
ENSPTRG00000051168	SMARCA2	100	98.087	ENSCCAG00000030636	SMARCA2	100	98.087	Cebus_capucinus
ENSPTRG00000051168	SMARCA2	100	97.355	ENSCATG00000031470	SMARCA2	100	97.355	Cercocebus_atys
ENSPTRG00000051168	SMARCA2	100	95.486	ENSCLAG00000014484	SMARCA2	100	95.868	Chinchilla_lanigera
ENSPTRG00000051168	SMARCA2	98	98.996	ENSCSAG00000008650	SMARCA2	99	96.949	Chlorocebus_sabaeus
ENSPTRG00000051168	SMARCA2	88	91.696	ENSCHOG00000004316	SMARCA2	87	90.785	Choloepus_hoffmanni
ENSPTRG00000051168	SMARCA2	100	92.766	ENSCPBG00000025463	SMARCA2	100	92.766	Chrysemys_picta_bellii
ENSPTRG00000051168	SMARCA2	99	98.931	ENSCANG00000039597	SMARCA2	100	97.550	Colobus_angolensis_palliatus
ENSPTRG00000051168	SMARCA2	100	88.708	ENSCGRG00001002323	Smarca2	100	88.715	Cricetulus_griseus_chok1gshd
ENSPTRG00000051168	SMARCA2	99	76.707	ENSCSEG00000019311	SMARCA2	96	76.122	Cynoglossus_semilaevis
ENSPTRG00000051168	SMARCA2	93	80.120	ENSCVAG00000016571	SMARCA2	95	79.459	Cyprinodon_variegatus
ENSPTRG00000051168	SMARCA2	100	81.830	ENSDARG00000008904	smarca2	97	81.620	Danio_rerio
ENSPTRG00000051168	SMARCA2	100	96.643	ENSDNOG00000006402	SMARCA2	100	96.643	Dasypus_novemcinctus
ENSPTRG00000051168	SMARCA2	100	95.417	ENSDORG00000014832	Smarca2	100	96.050	Dipodomys_ordii
ENSPTRG00000051168	SMARCA2	87	62.101	ENSEBUG00000002449	-	95	63.796	Eptatretus_burgeri
ENSPTRG00000051168	SMARCA2	97	72.480	ENSEBUG00000011442	-	96	69.794	Eptatretus_burgeri
ENSPTRG00000051168	SMARCA2	100	96.442	ENSEASG00005010312	SMARCA2	100	96.442	Equus_asinus_asinus
ENSPTRG00000051168	SMARCA2	67	98.611	ENSEEUG00000015540	-	69	98.611	Erinaceus_europaeus
ENSPTRG00000051168	SMARCA2	95	80.290	ENSELUG00000010318	smarca2	96	79.236	Esox_lucius
ENSPTRG00000051168	SMARCA2	100	95.825	ENSFCAG00000001568	SMARCA2	100	95.825	Felis_catus
ENSPTRG00000051168	SMARCA2	100	92.249	ENSFALG00000010416	SMARCA2	100	93.092	Ficedula_albicollis
ENSPTRG00000051168	SMARCA2	98	96.198	ENSFDAG00000010502	SMARCA2	99	95.070	Fukomys_damarensis
ENSPTRG00000051168	SMARCA2	100	80.249	ENSFHEG00000021250	SMARCA2	97	79.872	Fundulus_heteroclitus
ENSPTRG00000051168	SMARCA2	98	78.115	ENSGMOG00000014229	SMARCA2	97	78.227	Gadus_morhua
ENSPTRG00000051168	SMARCA2	100	92.259	ENSGALG00000010164	SMARCA2	100	92.503	Gallus_gallus
ENSPTRG00000051168	SMARCA2	93	79.030	ENSGAFG00000001164	SMARCA2	93	75.665	Gambusia_affinis
ENSPTRG00000051168	SMARCA2	99	79.230	ENSGACG00000014488	SMARCA2	97	78.521	Gasterosteus_aculeatus
ENSPTRG00000051168	SMARCA2	100	92.766	ENSGAGG00000024412	SMARCA2	100	92.766	Gopherus_agassizii
ENSPTRG00000051168	SMARCA2	98	94.452	ENSGGOG00000000513	SMARCA2	100	98.345	Gorilla_gorilla
ENSPTRG00000051168	SMARCA2	100	80.350	ENSHBUG00000006691	SMARCA2	97	80.231	Haplochromis_burtoni
ENSPTRG00000051168	SMARCA2	99	95.198	ENSHGLG00000005215	SMARCA2	99	95.327	Heterocephalus_glaber_female
ENSPTRG00000051168	SMARCA2	100	95.299	ENSHGLG00100010496	SMARCA2	100	95.426	Heterocephalus_glaber_male
ENSPTRG00000051168	SMARCA2	98	75.573	ENSHCOG00000015348	-	88	86.733	Hippocampus_comes
ENSPTRG00000051168	SMARCA2	100	81.308	ENSIPUG00000011060	smarca2	97	82.219	Ictalurus_punctatus
ENSPTRG00000051168	SMARCA2	100	96.422	ENSSTOG00000006812	SMARCA2	100	96.422	Ictidomys_tridecemlineatus
ENSPTRG00000051168	SMARCA2	100	95.431	ENSJJAG00000010867	Smarca2	100	96.003	Jaculus_jaculus
ENSPTRG00000051168	SMARCA2	100	79.950	ENSKMAG00000015844	-	98	79.605	Kryptolebias_marmoratus
ENSPTRG00000051168	SMARCA2	53	73.091	ENSLACG00000000270	SMARCA2	99	75.240	Latimeria_chalumnae
ENSPTRG00000051168	SMARCA2	98	83.949	ENSLOCG00000011499	smarca2	97	83.885	Lepisosteus_oculatus
ENSPTRG00000051168	SMARCA2	100	94.812	ENSLAFG00000014061	SMARCA2	100	95.765	Loxodonta_africana
ENSPTRG00000051168	SMARCA2	100	96.474	ENSMFAG00000003814	SMARCA2	100	96.474	Macaca_fascicularis
ENSPTRG00000051168	SMARCA2	100	97.550	ENSMMUG00000015279	SMARCA2	100	97.550	Macaca_mulatta
ENSPTRG00000051168	SMARCA2	100	96.989	ENSMNEG00000041069	SMARCA2	99	98.004	Macaca_nemestrina
ENSPTRG00000051168	SMARCA2	100	95.340	ENSMLEG00000027418	SMARCA2	99	96.763	Mandrillus_leucophaeus
ENSPTRG00000051168	SMARCA2	100	80.807	ENSMAMG00000003056	SMARCA2	97	82.098	Mastacembelus_armatus
ENSPTRG00000051168	SMARCA2	100	80.439	ENSMZEG00005020709	SMARCA2	97	80.322	Maylandia_zebra
ENSPTRG00000051168	SMARCA2	84	77.955	ENSMGAG00000005160	-	100	77.822	Meleagris_gallopavo
ENSPTRG00000051168	SMARCA2	100	96.985	ENSMICG00000005162	SMARCA2	100	96.985	Microcebus_murinus
ENSPTRG00000051168	SMARCA2	100	95.117	ENSMOCG00000001611	Smarca2	100	95.371	Microtus_ochrogaster
ENSPTRG00000051168	SMARCA2	98	81.521	ENSMMOG00000014196	SMARCA2	97	77.937	Mola_mola
ENSPTRG00000051168	SMARCA2	100	94.028	ENSMODG00000003578	SMARCA2	100	94.409	Monodelphis_domestica
ENSPTRG00000051168	SMARCA2	99	80.513	ENSMALG00000009611	SMARCA2	97	80.092	Monopterus_albus
ENSPTRG00000051168	SMARCA2	98	96.315	MGP_CAROLIEiJ_G0022841	Smarca2	100	95.194	Mus_caroli
ENSPTRG00000051168	SMARCA2	98	96.241	ENSMUSG00000024921	Smarca2	99	99.441	Mus_musculus
ENSPTRG00000051168	SMARCA2	100	94.870	MGP_PahariEiJ_G0014334	Smarca2	100	95.250	Mus_pahari
ENSPTRG00000051168	SMARCA2	98	96.102	MGP_SPRETEiJ_G0023759	Smarca2	100	94.886	Mus_spretus
ENSPTRG00000051168	SMARCA2	81	99.219	ENSMPUG00000005171	SMARCA2	94	99.219	Mustela_putorius_furo
ENSPTRG00000051168	SMARCA2	99	90.864	ENSMLUG00000002342	SMARCA2	99	91.353	Myotis_lucifugus
ENSPTRG00000051168	SMARCA2	98	95.857	ENSNGAG00000000108	Smarca2	99	94.852	Nannospalax_galili
ENSPTRG00000051168	SMARCA2	93	71.131	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSPTRG00000051168	SMARCA2	100	94.968	ENSNLEG00000008575	SMARCA2	100	94.968	Nomascus_leucogenys
ENSPTRG00000051168	SMARCA2	98	89.137	ENSMEUG00000009812	SMARCA2	100	85.346	Notamacropus_eugenii
ENSPTRG00000051168	SMARCA2	100	89.981	ENSOPRG00000013474	SMARCA2	100	91.007	Ochotona_princeps
ENSPTRG00000051168	SMARCA2	99	95.272	ENSODEG00000005452	SMARCA2	99	95.217	Octodon_degus
ENSPTRG00000051168	SMARCA2	99	80.769	ENSONIG00000014163	SMARCA2	97	80.732	Oreochromis_niloticus
ENSPTRG00000051168	SMARCA2	55	94.480	ENSOANG00000008299	-	95	98.248	Ornithorhynchus_anatinus
ENSPTRG00000051168	SMARCA2	100	94.959	ENSOCUG00000006320	SMARCA2	100	95.715	Oryctolagus_cuniculus
ENSPTRG00000051168	SMARCA2	100	79.762	ENSORLG00000020820	SMARCA2	100	79.511	Oryzias_latipes
ENSPTRG00000051168	SMARCA2	100	79.762	ENSORLG00015006289	SMARCA2	98	90.872	Oryzias_latipes_hsok
ENSPTRG00000051168	SMARCA2	99	80.717	ENSOMEG00000009736	-	97	79.858	Oryzias_melastigma
ENSPTRG00000051168	SMARCA2	98	94.877	ENSOGAG00000017053	SMARCA2	99	93.974	Otolemur_garnettii
ENSPTRG00000051168	SMARCA2	100	93.801	ENSOARG00000013265	SMARCA2	100	93.825	Ovis_aries
ENSPTRG00000051168	SMARCA2	99	95.603	ENSPPAG00000038717	SMARCA2	99	95.603	Pan_paniscus
ENSPTRG00000051168	SMARCA2	100	95.889	ENSPPRG00000001879	SMARCA2	100	95.889	Panthera_pardus
ENSPTRG00000051168	SMARCA2	100	90.545	ENSPANG00000025121	SMARCA2	100	89.895	Papio_anubis
ENSPTRG00000051168	SMARCA2	100	83.069	ENSPKIG00000018469	-	100	82.435	Paramormyrops_kingsleyae
ENSPTRG00000051168	SMARCA2	100	91.577	ENSPSIG00000006284	SMARCA2	100	91.767	Pelodiscus_sinensis
ENSPTRG00000051168	SMARCA2	98	76.956	ENSPMGG00000013696	-	97	74.626	Periophthalmus_magnuspinnatus
ENSPTRG00000051168	SMARCA2	100	94.978	ENSPEMG00000019821	Smarca2	100	94.978	Peromyscus_maniculatus_bairdii
ENSPTRG00000051168	SMARCA2	98	72.101	ENSPMAG00000005337	-	94	72.637	Petromyzon_marinus
ENSPTRG00000051168	SMARCA2	50	81.399	ENSPMAG00000001030	-	100	81.399	Petromyzon_marinus
ENSPTRG00000051168	SMARCA2	100	93.774	ENSPCIG00000015658	SMARCA2	100	94.155	Phascolarctos_cinereus
ENSPTRG00000051168	SMARCA2	100	79.714	ENSPFOG00000001856	SMARCA2	98	78.776	Poecilia_formosa
ENSPTRG00000051168	SMARCA2	99	79.686	ENSPLAG00000017829	SMARCA2	94	79.410	Poecilia_latipinna
ENSPTRG00000051168	SMARCA2	99	79.736	ENSPMEG00000001815	-	97	78.776	Poecilia_mexicana
ENSPTRG00000051168	SMARCA2	100	79.293	ENSPREG00000013800	SMARCA2	98	79.185	Poecilia_reticulata
ENSPTRG00000051168	SMARCA2	100	97.014	ENSPPYG00000019258	SMARCA2	100	97.014	Pongo_abelii
ENSPTRG00000051168	SMARCA2	79	84.076	ENSPCAG00000016969	SMARCA2	78	85.223	Procavia_capensis
ENSPTRG00000051168	SMARCA2	100	94.856	ENSPCOG00000025709	SMARCA2	100	94.856	Propithecus_coquereli
ENSPTRG00000051168	SMARCA2	91	98.947	ENSPVAG00000000901	SMARCA2	95	98.947	Pteropus_vampyrus
ENSPTRG00000051168	SMARCA2	100	76.971	ENSPNYG00000004533	SMARCA2	97	76.508	Pundamilia_nyererei
ENSPTRG00000051168	SMARCA2	99	82.689	ENSPNAG00000014635	smarca2	96	82.752	Pygocentrus_nattereri
ENSPTRG00000051168	SMARCA2	100	94.803	ENSRNOG00000011931	Smarca2	100	94.991	Rattus_norvegicus
ENSPTRG00000051168	SMARCA2	100	96.041	ENSRBIG00000038618	SMARCA2	99	97.557	Rhinopithecus_bieti
ENSPTRG00000051168	SMARCA2	98	99.210	ENSRROG00000019271	SMARCA2	99	99.210	Rhinopithecus_roxellana
ENSPTRG00000051168	SMARCA2	100	95.105	ENSSBOG00000034827	SMARCA2	100	95.105	Saimiri_boliviensis_boliviensis
ENSPTRG00000051168	SMARCA2	100	93.710	ENSSHAG00000007884	SMARCA2	100	93.710	Sarcophilus_harrisii
ENSPTRG00000051168	SMARCA2	98	86.001	ENSSFOG00015014870	SMARCA2	97	86.073	Scleropages_formosus
ENSPTRG00000051168	SMARCA2	100	80.062	ENSSMAG00000013707	SMARCA2	98	79.517	Scophthalmus_maximus
ENSPTRG00000051168	SMARCA2	100	78.976	ENSSDUG00000008852	-	98	78.786	Seriola_dumerili
ENSPTRG00000051168	SMARCA2	98	80.677	ENSSLDG00000025449	SMARCA2	96	79.029	Seriola_lalandi_dorsalis
ENSPTRG00000051168	SMARCA2	95	97.368	ENSSARG00000007888	SMARCA2	95	97.368	Sorex_araneus
ENSPTRG00000051168	SMARCA2	93	90.023	ENSSPUG00000001629	SMARCA2	98	87.808	Sphenodon_punctatus
ENSPTRG00000051168	SMARCA2	100	80.363	ENSSPAG00000020091	-	97	79.872	Stegastes_partitus
ENSPTRG00000051168	SMARCA2	100	95.935	ENSSSCG00000005232	SMARCA2	100	95.935	Sus_scrofa
ENSPTRG00000051168	SMARCA2	100	90.915	ENSTGUG00000005460	SMARCA2	98	92.052	Taeniopygia_guttata
ENSPTRG00000051168	SMARCA2	99	80.774	ENSTRUG00000015619	SMARCA2	97	79.666	Takifugu_rubripes
ENSPTRG00000051168	SMARCA2	71	100.000	ENSTBEG00000008767	SMARCA2	71	100.000	Tupaia_belangeri
ENSPTRG00000051168	SMARCA2	98	96.636	ENSTTRG00000002033	SMARCA2	100	92.835	Tursiops_truncatus
ENSPTRG00000051168	SMARCA2	98	96.046	ENSUAMG00000024701	SMARCA2	99	96.046	Ursus_americanus
ENSPTRG00000051168	SMARCA2	86	95.105	ENSVPAG00000001204	SMARCA2	95	95.105	Vicugna_pacos
ENSPTRG00000051168	SMARCA2	76	96.089	ENSVVUG00000004598	SMARCA2	99	95.913	Vulpes_vulpes
ENSPTRG00000051168	SMARCA2	100	83.168	ENSXETG00000015299	smarca2	100	83.116	Xenopus_tropicalis
ENSPTRG00000051168	SMARCA2	98	79.520	ENSXCOG00000011073	SMARCA2	97	79.724	Xiphophorus_couchianus
ENSPTRG00000051168	SMARCA2	100	79.270	ENSXMAG00000015611	SMARCA2	99	79.425	Xiphophorus_maculatus