EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000051253 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 16917 bases
Position: chrKV421069.1:87521-104437
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000063855	CPSF_A	PF03178.15	1.3e-91	1	1
ENSPTRP00000061838	CPSF_A	PF03178.15	3.3e-87	1	1
ENSPTRP00000065444	CPSF_A	PF03178.15	3.4e-87	1	1
ENSPTRP00000063354	CPSF_A	PF03178.15	1.1e-33	1	1
ENSPTRP00000067907	CPSF_A	PF03178.15	2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000080430	-	615	-	ENSPTRP00000063354	204 (aa)	-	A0A2I3SG14
ENSPTRT00000108232	-	4314	-	ENSPTRP00000061838	1437 (aa)	-	A0A2I3RB43
ENSPTRT00000104341	-	651	-	ENSPTRP00000067907	216 (aa)	-	A0A2I3RUA7
ENSPTRT00000092609	-	4418	XM_016946314	ENSPTRP00000063855	1467 (aa)	-	A0A2I3RGS0
ENSPTRT00000092481	-	4329	-	ENSPTRP00000065444	1442 (aa)	-	A0A2I3RL69
ENSPTRT00000091808	-	447	-	ENSPTRP00000070257	148 (aa)	-	A0A2I3T9B6

Gene Model

Click here to download ENSPTRG00000051253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000051253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000051253	-	100	62.963	ENSPTRG00000052516	-	100	69.444
ENSPTRG00000051253	-	100	100.000	ENSPTRG00000049288	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000051253	-	100	99.510	ENSG00000071894	CPSF1	100	99.510	Homo_sapiens
ENSPTRG00000051253	-	100	81.900	ENSAPOG00000019621	cpsf1	100	76.678	Acanthochromis_polyacanthus
ENSPTRG00000051253	-	97	93.399	ENSAMEG00000005557	CPSF1	100	93.399	Ailuropoda_melanoleuca
ENSPTRG00000051253	-	100	80.543	ENSACIG00000006112	cpsf1	100	76.735	Amphilophus_citrinellus
ENSPTRG00000051253	-	100	81.900	ENSAOCG00000007120	cpsf1	100	77.981	Amphiprion_ocellaris
ENSPTRG00000051253	-	100	81.900	ENSAPEG00000005755	cpsf1	100	78.252	Amphiprion_percula
ENSPTRG00000051253	-	100	81.448	ENSATEG00000011097	cpsf1	100	76.724	Anabas_testudineus
ENSPTRG00000051253	-	93	80.356	ENSACAG00000009655	CPSF1	100	81.771	Anolis_carolinensis
ENSPTRG00000051253	-	100	97.478	ENSANAG00000036514	CPSF1	100	97.478	Aotus_nancymaae
ENSPTRG00000051253	-	100	80.543	ENSACLG00000012231	cpsf1	99	77.317	Astatotilapia_calliptera
ENSPTRG00000051253	-	100	80.543	ENSAMXG00000008485	cpsf1	100	72.894	Astyanax_mexicanus
ENSPTRG00000051253	-	100	95.102	ENSBTAG00000008355	CPSF1	100	95.396	Bos_taurus
ENSPTRG00000051253	-	99	34.361	WBGene00022301	cpsf-1	100	40.282	Caenorhabditis_elegans
ENSPTRG00000051253	-	100	97.273	ENSCJAG00000021421	CPSF1	100	97.273	Callithrix_jacchus
ENSPTRG00000051253	-	97	94.733	ENSCAFG00000001600	CPSF1	100	94.733	Canis_familiaris
ENSPTRG00000051253	-	100	95.034	ENSCAFG00020020821	CPSF1	100	95.034	Canis_lupus_dingo
ENSPTRG00000051253	-	100	89.295	ENSCHIG00000015833	CPSF1	100	89.295	Capra_hircus
ENSPTRG00000051253	-	100	96.319	ENSTSYG00000028560	CPSF1	99	99.123	Carlito_syrichta
ENSPTRG00000051253	-	97	93.592	ENSCAPG00000014921	CPSF1	99	93.592	Cavia_aperea
ENSPTRG00000051253	-	100	93.324	ENSCPOG00000011448	CPSF1	100	93.324	Cavia_porcellus
ENSPTRG00000051253	-	100	97.410	ENSCCAG00000037658	CPSF1	100	97.410	Cebus_capucinus
ENSPTRG00000051253	-	100	99.020	ENSCATG00000037234	CPSF1	100	99.020	Cercocebus_atys
ENSPTRG00000051253	-	100	94.956	ENSCLAG00000012166	CPSF1	100	94.956	Chinchilla_lanigera
ENSPTRG00000051253	-	100	97.614	ENSCSAG00000008502	CPSF1	100	97.614	Chlorocebus_sabaeus
ENSPTRG00000051253	-	98	87.517	ENSCPBG00000018910	CPSF1	96	87.692	Chrysemys_picta_bellii
ENSPTRG00000051253	-	96	47.327	ENSCING00000000514	-	100	48.422	Ciona_intestinalis
ENSPTRG00000051253	-	99	47.095	ENSCSAVG00000002293	-	98	49.765	Ciona_savignyi
ENSPTRG00000051253	-	100	98.529	ENSCANG00000032760	CPSF1	100	98.529	Colobus_angolensis_palliatus
ENSPTRG00000051253	-	100	94.819	ENSCGRG00001016344	Cpsf1	100	94.819	Cricetulus_griseus_chok1gshd
ENSPTRG00000051253	-	100	92.774	ENSCGRG00000003118	Cpsf1	100	92.774	Cricetulus_griseus_crigri
ENSPTRG00000051253	-	100	78.281	ENSCSEG00000013464	cpsf1	100	76.106	Cynoglossus_semilaevis
ENSPTRG00000051253	-	100	81.951	ENSCVAG00000014059	cpsf1	100	81.951	Cyprinodon_variegatus
ENSPTRG00000051253	-	100	80.090	ENSDARG00000034178	cpsf1	100	78.402	Danio_rerio
ENSPTRG00000051253	-	56	95.942	ENSDNOG00000043654	CPSF1	94	95.942	Dasypus_novemcinctus
ENSPTRG00000051253	-	97	94.366	ENSDORG00000006278	Cpsf1	99	94.366	Dipodomys_ordii
ENSPTRG00000051253	-	99	46.606	FBgn0024698	Cpsf160	100	44.853	Drosophila_melanogaster
ENSPTRG00000051253	-	80	97.315	ENSETEG00000006022	CPSF1	83	97.315	Echinops_telfairi
ENSPTRG00000051253	-	91	64.677	ENSEBUG00000006844	-	97	74.541	Eptatretus_burgeri
ENSPTRG00000051253	-	100	95.646	ENSEASG00005010774	CPSF1	100	95.646	Equus_asinus_asinus
ENSPTRG00000051253	-	100	95.646	ENSECAG00000022209	CPSF1	100	95.646	Equus_caballus
ENSPTRG00000051253	-	100	93.061	ENSEEUG00000000471	CPSF1	100	93.061	Erinaceus_europaeus
ENSPTRG00000051253	-	100	81.364	ENSELUG00000012271	cpsf1	100	77.441	Esox_lucius
ENSPTRG00000051253	-	100	95.024	ENSFDAG00000016060	CPSF1	100	95.024	Fukomys_damarensis
ENSPTRG00000051253	-	100	76.471	ENSFHEG00000016801	cpsf1	100	75.559	Fundulus_heteroclitus
ENSPTRG00000051253	-	100	80.093	ENSGMOG00000000796	cpsf1	100	76.746	Gadus_morhua
ENSPTRG00000051253	-	95	85.714	ENSGAFG00000018890	cpsf1	100	85.714	Gambusia_affinis
ENSPTRG00000051253	-	100	79.630	ENSGACG00000008703	cpsf1	100	77.350	Gasterosteus_aculeatus
ENSPTRG00000051253	-	100	82.325	ENSGAGG00000004276	CPSF1	98	87.500	Gopherus_agassizii
ENSPTRG00000051253	-	100	64.352	ENSGGOG00000040487	-	100	70.833	Gorilla_gorilla
ENSPTRG00000051253	-	100	99.510	ENSGGOG00000016185	CPSF1	100	99.510	Gorilla_gorilla
ENSPTRG00000051253	-	100	80.543	ENSHBUG00000018900	cpsf1	100	78.027	Haplochromis_burtoni
ENSPTRG00000051253	-	100	94.888	ENSHGLG00000016139	CPSF1	100	94.888	Heterocephalus_glaber_female
ENSPTRG00000051253	-	100	94.819	ENSHGLG00100009750	CPSF1	100	94.819	Heterocephalus_glaber_male
ENSPTRG00000051253	-	100	79.630	ENSHCOG00000018509	cpsf1	100	75.717	Hippocampus_comes
ENSPTRG00000051253	-	100	81.900	ENSIPUG00000011259	cpsf1	100	75.473	Ictalurus_punctatus
ENSPTRG00000051253	-	97	95.088	ENSSTOG00000009957	CPSF1	99	95.088	Ictidomys_tridecemlineatus
ENSPTRG00000051253	-	100	94.683	ENSJJAG00000023002	Cpsf1	100	94.683	Jaculus_jaculus
ENSPTRG00000051253	-	100	77.376	ENSKMAG00000001940	cpsf1	99	85.893	Kryptolebias_marmoratus
ENSPTRG00000051253	-	100	80.090	ENSLBEG00000003601	cpsf1	100	76.371	Labrus_bergylta
ENSPTRG00000051253	-	100	82.805	ENSLACG00000000233	CPSF1	92	79.113	Latimeria_chalumnae
ENSPTRG00000051253	-	100	82.960	ENSLOCG00000008484	cpsf1	100	77.069	Lepisosteus_oculatus
ENSPTRG00000051253	-	97	94.027	ENSLAFG00000022601	CPSF1	100	94.027	Loxodonta_africana
ENSPTRG00000051253	-	100	99.020	ENSMFAG00000037013	CPSF1	100	99.020	Macaca_fascicularis
ENSPTRG00000051253	-	100	99.020	ENSMMUG00000007380	CPSF1	100	99.020	Macaca_mulatta
ENSPTRG00000051253	-	100	99.020	ENSMNEG00000043564	CPSF1	100	99.020	Macaca_nemestrina
ENSPTRG00000051253	-	100	99.020	ENSMLEG00000043010	CPSF1	100	99.020	Mandrillus_leucophaeus
ENSPTRG00000051253	-	100	81.448	ENSMAMG00000003803	cpsf1	100	76.877	Mastacembelus_armatus
ENSPTRG00000051253	-	100	80.543	ENSMZEG00005001168	cpsf1	100	75.918	Maylandia_zebra
ENSPTRG00000051253	-	100	94.615	ENSMAUG00000003601	Cpsf1	100	94.615	Mesocricetus_auratus
ENSPTRG00000051253	-	100	96.046	ENSMICG00000015767	CPSF1	100	96.046	Microcebus_murinus
ENSPTRG00000051253	-	100	94.819	ENSMOCG00000022758	Cpsf1	100	94.819	Microtus_ochrogaster
ENSPTRG00000051253	-	100	80.090	ENSMMOG00000021245	cpsf1	100	77.498	Mola_mola
ENSPTRG00000051253	-	100	91.458	ENSMODG00000010755	CPSF1	100	91.458	Monodelphis_domestica
ENSPTRG00000051253	-	100	80.995	ENSMALG00000020545	cpsf1	100	76.447	Monopterus_albus
ENSPTRG00000051253	-	100	95.024	MGP_CAROLIEiJ_G0019936	Cpsf1	100	95.024	Mus_caroli
ENSPTRG00000051253	-	100	94.956	ENSMUSG00000034022	Cpsf1	99	96.366	Mus_musculus
ENSPTRG00000051253	-	100	94.888	MGP_PahariEiJ_G0019946	Cpsf1	100	94.888	Mus_pahari
ENSPTRG00000051253	-	100	94.956	MGP_SPRETEiJ_G0020839	Cpsf1	100	94.956	Mus_spretus
ENSPTRG00000051253	-	93	95.259	ENSMPUG00000006419	CPSF1	93	96.003	Mustela_putorius_furo
ENSPTRG00000051253	-	78	97.484	ENSMLUG00000000667	-	100	96.667	Myotis_lucifugus
ENSPTRG00000051253	-	100	94.683	ENSNGAG00000022460	Cpsf1	100	94.683	Nannospalax_galili
ENSPTRG00000051253	-	100	81.019	ENSNBRG00000000813	cpsf1	100	73.759	Neolamprologus_brichardi
ENSPTRG00000051253	-	100	98.529	ENSNLEG00000010633	-	100	98.529	Nomascus_leucogenys
ENSPTRG00000051253	-	84	96.512	ENSMEUG00000014922	CPSF1	85	96.512	Notamacropus_eugenii
ENSPTRG00000051253	-	61	96.939	ENSOPRG00000004693	-	71	96.939	Ochotona_princeps
ENSPTRG00000051253	-	100	95.092	ENSODEG00000013995	CPSF1	100	95.092	Octodon_degus
ENSPTRG00000051253	-	100	80.090	ENSONIG00000007676	cpsf1	100	78.299	Oreochromis_niloticus
ENSPTRG00000051253	-	58	91.429	ENSOANG00000010716	CPSF1	88	91.429	Ornithorhynchus_anatinus
ENSPTRG00000051253	-	100	78.733	ENSORLG00000013544	cpsf1	92	87.243	Oryzias_latipes
ENSPTRG00000051253	-	100	78.733	ENSORLG00020021693	cpsf1	92	87.243	Oryzias_latipes_hni
ENSPTRG00000051253	-	100	78.733	ENSORLG00015009979	cpsf1	100	76.136	Oryzias_latipes_hsok
ENSPTRG00000051253	-	100	79.186	ENSOMEG00000011849	cpsf1	100	76.238	Oryzias_melastigma
ENSPTRG00000051253	-	100	95.910	ENSOGAG00000000315	CPSF1	100	95.910	Otolemur_garnettii
ENSPTRG00000051253	-	100	100.000	ENSPPAG00000019280	CPSF1	100	100.000	Pan_paniscus
ENSPTRG00000051253	-	100	98.529	ENSPANG00000015005	CPSF1	100	98.529	Papio_anubis
ENSPTRG00000051253	-	100	83.258	ENSPKIG00000002582	cpsf1	100	79.510	Paramormyrops_kingsleyae
ENSPTRG00000051253	-	100	77.376	ENSPMGG00000022177	-	100	84.259	Periophthalmus_magnuspinnatus
ENSPTRG00000051253	-	100	91.390	ENSPCIG00000009035	CPSF1	100	91.390	Phascolarctos_cinereus
ENSPTRG00000051253	-	100	77.828	ENSPFOG00000012870	cpsf1	100	75.116	Poecilia_formosa
ENSPTRG00000051253	-	100	77.376	ENSPREG00000016307	cpsf1	100	74.867	Poecilia_reticulata
ENSPTRG00000051253	-	100	89.843	ENSPPYG00000018973	CPSF1	100	89.843	Pongo_abelii
ENSPTRG00000051253	-	100	86.364	ENSPCAG00000011541	CPSF1	94	94.886	Procavia_capensis
ENSPTRG00000051253	-	100	94.608	ENSPCOG00000020001	CPSF1	100	94.608	Propithecus_coquereli
ENSPTRG00000051253	-	90	98.830	ENSPVAG00000006761	CPSF1	91	98.830	Pteropus_vampyrus
ENSPTRG00000051253	-	100	80.543	ENSPNYG00000004906	cpsf1	100	77.032	Pundamilia_nyererei
ENSPTRG00000051253	-	100	74.202	ENSPNAG00000024395	cpsf1	100	74.202	Pygocentrus_nattereri
ENSPTRG00000051253	-	100	94.956	ENSRNOG00000030705	Cpsf1	100	94.956	Rattus_norvegicus
ENSPTRG00000051253	-	100	99.020	ENSRBIG00000044907	CPSF1	100	99.020	Rhinopithecus_bieti
ENSPTRG00000051253	-	100	99.020	ENSRROG00000044861	CPSF1	100	99.020	Rhinopithecus_roxellana
ENSPTRG00000051253	-	97	97.322	ENSSBOG00000027177	CPSF1	100	97.322	Saimiri_boliviensis_boliviensis
ENSPTRG00000051253	-	100	91.254	ENSSHAG00000006500	CPSF1	100	91.254	Sarcophilus_harrisii
ENSPTRG00000051253	-	100	83.710	ENSSFOG00015004606	cpsf1	100	79.714	Scleropages_formosus
ENSPTRG00000051253	-	100	81.900	ENSSMAG00000020547	cpsf1	100	76.713	Scophthalmus_maximus
ENSPTRG00000051253	-	100	81.448	ENSSDUG00000001100	cpsf1	100	77.853	Seriola_dumerili
ENSPTRG00000051253	-	100	81.448	ENSSLDG00000003619	cpsf1	100	77.906	Seriola_lalandi_dorsalis
ENSPTRG00000051253	-	89	97.917	ENSSARG00000003643	CPSF1	92	97.917	Sorex_araneus
ENSPTRG00000051253	-	100	89.216	ENSSPUG00000014396	CPSF1	100	89.216	Sphenodon_punctatus
ENSPTRG00000051253	-	100	81.448	ENSSPAG00000005349	cpsf1	100	76.862	Stegastes_partitus
ENSPTRG00000051253	-	100	94.490	ENSSSCG00000005906	CPSF1	100	94.490	Sus_scrofa
ENSPTRG00000051253	-	100	78.281	ENSTRUG00000013134	cpsf1	99	76.495	Takifugu_rubripes
ENSPTRG00000051253	-	100	77.578	ENSTNIG00000014027	cpsf1	100	77.162	Tetraodon_nigroviridis
ENSPTRG00000051253	-	77	88.793	ENSTBEG00000001756	CPSF1	91	89.310	Tupaia_belangeri
ENSPTRG00000051253	-	100	89.593	ENSTTRG00000001937	CPSF1	90	92.715	Tursiops_truncatus
ENSPTRG00000051253	-	97	95.084	ENSUAMG00000006476	CPSF1	98	95.084	Ursus_americanus
ENSPTRG00000051253	-	69	57.516	ENSVPAG00000000157	-	50	94.949	Vicugna_pacos
ENSPTRG00000051253	-	100	94.118	ENSVVUG00000005940	-	100	94.118	Vulpes_vulpes
ENSPTRG00000051253	-	100	77.376	ENSXCOG00000003608	cpsf1	100	76.139	Xiphophorus_couchianus
ENSPTRG00000051253	-	100	77.828	ENSXMAG00000005798	cpsf1	100	75.764	Xiphophorus_maculatus