EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTRG00000051640 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Pan_troglodytes
Status
putative
Strand
Plus strand
Length
6134 bases
Position
chr17:37995929-38002062
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTRP00000089329Smg4_UPF3PF03467.153.3e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTRT00000080421-768-ENSPTRP00000081124255 (aa)-A0A2I3SW00
ENSPTRT00000090658-1155-ENSPTRP00000089329384 (aa)-A0A2I3TJ93
Gene Model
Click here to download ENSPTRG00000051640's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000051640's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTRG00000051640-9488.601ENSPTRG00000006073UPF3A9086.432
ENSPTRG00000051640-9787.792ENSPTRG00000041835-9587.339
ENSPTRG00000051640-9786.735ENSPTRG00000041187-9686.735
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTRG00000051640-9787.469ENSG00000169062UPF3A9087.469Homo_sapiens
ENSPTRG00000051640-8543.896ENSAPOG00000013484upf3a8145.195Acanthochromis_polyacanthus
ENSPTRG00000051640-8640.000ENSAPOG00000012775upf3b8741.748Acanthochromis_polyacanthus
ENSPTRG00000051640-9860.762ENSAMEG00000004259UPF3A9860.762Ailuropoda_melanoleuca
ENSPTRG00000051640-9036.597ENSAMEG00000000163UPF3B8741.190Ailuropoda_melanoleuca
ENSPTRG00000051640-8541.133ENSACIG00000020468upf3a5472.840Amphilophus_citrinellus
ENSPTRG00000051640-8637.940ENSAOCG00000000706upf3b8740.488Amphiprion_ocellaris
ENSPTRG00000051640-8543.636ENSAOCG00000020784upf3a8044.935Amphiprion_ocellaris
ENSPTRG00000051640-8543.636ENSAPEG00000003519upf3a8044.935Amphiprion_percula
ENSPTRG00000051640-8548.446ENSATEG00000005843upf3a8045.974Anabas_testudineus
ENSPTRG00000051640-8855.190ENSACAG00000001540UPF3A9353.213Anolis_carolinensis
ENSPTRG00000051640-9036.473ENSACAG00000003625UPF3B9239.863Anolis_carolinensis
ENSPTRG00000051640-8638.701ENSANAG00000025598-6769.355Aotus_nancymaae
ENSPTRG00000051640-8636.294ENSANAG00000021894-7351.266Aotus_nancymaae
ENSPTRG00000051640-9481.606ENSANAG00000021713UPF3A9179.259Aotus_nancymaae
ENSPTRG00000051640-8541.191ENSACLG00000026274upf3a8142.928Astatotilapia_calliptera
ENSPTRG00000051640-9142.344ENSAMXG00000002608upf3a9542.152Astyanax_mexicanus
ENSPTRG00000051640-8636.111ENSCJAG00000004975UPF3B8341.457Callithrix_jacchus
ENSPTRG00000051640-9484.293ENSCJAG00000019102UPF3A9181.796Callithrix_jacchus
ENSPTRG00000051640-9036.659ENSCAFG00000018426UPF3B8840.416Canis_familiaris
ENSPTRG00000051640-9559.005ENSCAFG00000006504UPF3A9159.005Canis_familiaris
ENSPTRG00000051640-9036.842ENSCAFG00020004074UPF3B7674.242Canis_lupus_dingo
ENSPTRG00000051640-9559.005ENSCAFG00020014268UPF3A8859.005Canis_lupus_dingo
ENSPTRG00000051640-9460.000ENSCHIG00000008682UPF3A8559.122Capra_hircus
ENSPTRG00000051640-9035.990ENSTSYG00000014690UPF3B8740.670Carlito_syrichta
ENSPTRG00000051640-8160.465ENSTSYG00000001918UPF3A10060.465Carlito_syrichta
ENSPTRG00000051640-8056.438ENSCPOG00000006824UPF3A8456.438Cavia_porcellus
ENSPTRG00000051640-8430.997ENSCCAG00000029813-8230.997Cebus_capucinus
ENSPTRG00000051640-9483.161ENSCCAG00000018406UPF3A9180.741Cebus_capucinus
ENSPTRG00000051640-9480.570ENSCATG00000029733UPF3A9082.412Cercocebus_atys
ENSPTRG00000051640-9235.109ENSCLAG00000003260UPF3B8741.190Chinchilla_lanigera
ENSPTRG00000051640-9472.038ENSCSAG00000017388UPF3A9073.963Chlorocebus_sabaeus
ENSPTRG00000051640-5391.667ENSCHOG00000006918-5072.816Choloepus_hoffmanni
ENSPTRG00000051640-8656.364ENSCGRG00001017387Upf3a8956.364Cricetulus_griseus_chok1gshd
ENSPTRG00000051640-8656.364ENSCGRG00000001468Upf3a8956.364Cricetulus_griseus_crigri
ENSPTRG00000051640-8547.583ENSCSEG00000005106upf3a8145.547Cynoglossus_semilaevis
ENSPTRG00000051640-8536.658ENSCSEG00000002046upf3b8637.650Cynoglossus_semilaevis
ENSPTRG00000051640-8743.734ENSCVAG00000022333upf3a8245.013Cyprinodon_variegatus
ENSPTRG00000051640-9144.844ENSDARG00000069297upf3a9042.446Danio_rerio
ENSPTRG00000051640-8636.855ENSDNOG00000008665UPF3B8339.903Dasypus_novemcinctus
ENSPTRG00000051640-7963.231ENSDNOG00000034391UPF3A8859.690Dasypus_novemcinctus
ENSPTRG00000051640-8637.405ENSDORG00000006077Upf3b8342.278Dipodomys_ordii
ENSPTRG00000051640-8472.340ENSETEG00000010110UPF3A8751.896Echinops_telfairi
ENSPTRG00000051640-9037.136ENSEASG00005012919UPF3B7670.968Equus_asinus_asinus
ENSPTRG00000051640-9958.202ENSEASG00005021884UPF3A9358.202Equus_asinus_asinus
ENSPTRG00000051640-9037.136ENSECAG00000016947UPF3B7661.905Equus_caballus
ENSPTRG00000051640-9957.978ENSECAG00000017141UPF3A9357.978Equus_caballus
ENSPTRG00000051640-8547.558ENSELUG00000011050upf3a8145.244Esox_lucius
ENSPTRG00000051640-9267.819ENSFCAG00000014602UPF3A8467.819Felis_catus
ENSPTRG00000051640-9035.862ENSFALG00000001569UPF3B8440.596Ficedula_albicollis
ENSPTRG00000051640-9235.749ENSFDAG00000018869UPF3B8740.238Fukomys_damarensis
ENSPTRG00000051640-7146.951ENSGMOG00000019615upf3a9747.095Gadus_morhua
ENSPTRG00000051640-8743.112ENSGAFG00000021170upf3a8244.898Gambusia_affinis
ENSPTRG00000051640-8435.878ENSGACG00000017435upf3b8742.054Gasterosteus_aculeatus
ENSPTRG00000051640-8634.328ENSGAGG00000001219UPF3B8542.716Gopherus_agassizii
ENSPTRG00000051640-9787.469ENSGGOG00000015428UPF3A9087.469Gorilla_gorilla
ENSPTRG00000051640-10094.177ENSGGOG00000041219-9594.177Gorilla_gorilla
ENSPTRG00000051640-9490.186ENSGGOG00000043074-8890.716Gorilla_gorilla
ENSPTRG00000051640-8543.117ENSHBUG00000011325upf3a8044.935Haplochromis_burtoni
ENSPTRG00000051640-7857.265ENSHGLG00000001544UPF3A8157.550Heterocephalus_glaber_female
ENSPTRG00000051640-9035.507ENSHGLG00000019582-8341.353Heterocephalus_glaber_female
ENSPTRG00000051640-5537.984ENSHGLG00000011189-8238.776Heterocephalus_glaber_female
ENSPTRG00000051640-5537.984ENSHGLG00100001889-8238.710Heterocephalus_glaber_male
ENSPTRG00000051640-9034.300ENSHGLG00100002042-8341.667Heterocephalus_glaber_male
ENSPTRG00000051640-7857.265ENSHGLG00100013244UPF3A8157.550Heterocephalus_glaber_male
ENSPTRG00000051640-8540.152ENSHCOG00000017004upf3b8640.852Hippocampus_comes
ENSPTRG00000051640-8940.796ENSHCOG00000013985upf3a8242.786Hippocampus_comes
ENSPTRG00000051640-9841.798ENSIPUG00000023450upf3a8944.737Ictalurus_punctatus
ENSPTRG00000051640-8636.735ENSSTOG00000001101UPF3B8342.462Ictidomys_tridecemlineatus
ENSPTRG00000051640-8742.455ENSKMAG00000004381upf3a8244.246Kryptolebias_marmoratus
ENSPTRG00000051640-8546.296ENSLBEG00000021570upf3a8146.296Labrus_bergylta
ENSPTRG00000051640-8639.467ENSLACG00000008691UPF3B8739.952Latimeria_chalumnae
ENSPTRG00000051640-6842.715ENSLACG00000006645UPF3A9139.394Latimeria_chalumnae
ENSPTRG00000051640-9248.780ENSLOCG00000002665upf3a8846.585Lepisosteus_oculatus
ENSPTRG00000051640-9249.195ENSLAFG00000023358UPF3A9948.966Loxodonta_africana
ENSPTRG00000051640-8935.644ENSLAFG00000001267UPF3B8341.103Loxodonta_africana
ENSPTRG00000051640-9770.862ENSMFAG00000045016UPF3A9074.359Macaca_fascicularis
ENSPTRG00000051640-9281.551ENSMMUG00000007449UPF3A8785.561Macaca_mulatta
ENSPTRG00000051640-9381.266ENSMNEG00000036402UPF3A8385.224Macaca_nemestrina
ENSPTRG00000051640-9281.283ENSMLEG00000014726UPF3A10085.294Mandrillus_leucophaeus
ENSPTRG00000051640-8542.394ENSMAMG00000018364upf3a8143.641Mastacembelus_armatus
ENSPTRG00000051640-8541.191ENSMZEG00005021571upf3a8142.928Maylandia_zebra
ENSPTRG00000051640-8750.746ENSMGAG00000014837UPF3A9951.990Meleagris_gallopavo
ENSPTRG00000051640-8637.374ENSMAUG00000008705Upf3b8343.890Mesocricetus_auratus
ENSPTRG00000051640-9134.906ENSMOCG00000017893Upf3b8337.592Microtus_ochrogaster
ENSPTRG00000051640-6159.649ENSMOCG00000000550Upf3a7859.649Microtus_ochrogaster
ENSPTRG00000051640-9040.749ENSMMOG00000019751upf3a8542.389Mola_mola
ENSPTRG00000051640-8536.935ENSMODG00000010232UPF3B9242.289Monodelphis_domestica
ENSPTRG00000051640-9254.009ENSMODG00000003159UPF3A9955.189Monodelphis_domestica
ENSPTRG00000051640-8835.589MGP_CAROLIEiJ_G0032999Upf3b8341.646Mus_caroli
ENSPTRG00000051640-8753.316MGP_CAROLIEiJ_G0030848Upf3a8953.985Mus_caroli
ENSPTRG00000051640-8754.592ENSMUSG00000038398Upf3a9055.013Mus_musculus
ENSPTRG00000051640-8835.840MGP_PahariEiJ_G0031543Upf3b8441.278Mus_pahari
ENSPTRG00000051640-8654.897MGP_PahariEiJ_G0021311Upf3a8954.780Mus_pahari
ENSPTRG00000051640-8754.082MGP_SPRETEiJ_G0031958Upf3a9054.499Mus_spretus
ENSPTRG00000051640-8637.121ENSMPUG00000001531UPF3B8542.211Mustela_putorius_furo
ENSPTRG00000051640-9660.422ENSMPUG00000009139UPF3A8860.422Mustela_putorius_furo
ENSPTRG00000051640-9260.570ENSMLUG00000015905UPF3A9960.714Myotis_lucifugus
ENSPTRG00000051640-9034.867ENSMLUG00000010821UPF3B8740.714Myotis_lucifugus
ENSPTRG00000051640-8655.155ENSNGAG00000019314Upf3a8955.670Nannospalax_galili
ENSPTRG00000051640-8542.857ENSNBRG00000000828upf3a8044.675Neolamprologus_brichardi
ENSPTRG00000051640-9786.432ENSNLEG00000007563UPF3A9086.432Nomascus_leucogenys
ENSPTRG00000051640-9235.437ENSODEG00000002186-8341.562Octodon_degus
ENSPTRG00000051640-8542.377ENSONIG00000006817upf3a8044.186Oreochromis_niloticus
ENSPTRG00000051640-8060.661ENSOANG00000006985-9562.162Ornithorhynchus_anatinus
ENSPTRG00000051640-9235.714ENSOANG00000002594-9835.047Ornithorhynchus_anatinus
ENSPTRG00000051640-9034.339ENSOCUG00000010213UPF3B8839.954Oryctolagus_cuniculus
ENSPTRG00000051640-9251.790ENSOCUG00000008450UPF3A8548.804Oryctolagus_cuniculus
ENSPTRG00000051640-8745.570ENSORLG00000010911upf3a8143.188Oryzias_latipes
ENSPTRG00000051640-8545.953ENSORLG00020014317upf3a8042.820Oryzias_latipes_hni
ENSPTRG00000051640-8545.714ENSOMEG00000014425upf3a8142.597Oryzias_melastigma
ENSPTRG00000051640-8261.141ENSOGAG00000004788UPF3A8961.141Otolemur_garnettii
ENSPTRG00000051640-8636.776ENSOGAG00000033003-8541.646Otolemur_garnettii
ENSPTRG00000051640-9261.259ENSOARG00000009004UPF3A8761.017Ovis_aries
ENSPTRG00000051640-8636.220ENSOARG00000007869-9134.667Ovis_aries
ENSPTRG00000051640-9482.100ENSPPAG00000042267UPF3A9180.278Pan_paniscus
ENSPTRG00000051640-9864.691ENSPPRG00000025062UPF3A9164.691Panthera_pardus
ENSPTRG00000051640-8635.550ENSPPRG00000023536UPF3B8341.709Panthera_pardus
ENSPTRG00000051640-9777.889ENSPANG00000004346UPF3A9081.658Papio_anubis
ENSPTRG00000051640-9337.753ENSPKIG00000019226upf3b9440.541Paramormyrops_kingsleyae
ENSPTRG00000051640-9044.213ENSPKIG00000004422upf3a9142.754Paramormyrops_kingsleyae
ENSPTRG00000051640-9254.015ENSPSIG00000007468UPF3A9955.366Pelodiscus_sinensis
ENSPTRG00000051640-8540.146ENSPMGG00000012696upf3a8241.872Periophthalmus_magnuspinnatus
ENSPTRG00000051640-8458.047ENSPEMG00000019968-8758.311Peromyscus_maniculatus_bairdii
ENSPTRG00000051640-8835.750ENSPEMG00000012352Upf3b8441.667Peromyscus_maniculatus_bairdii
ENSPTRG00000051640-8537.215ENSPCIG00000028914UPF3B8237.975Phascolarctos_cinereus
ENSPTRG00000051640-7756.731ENSPCIG00000019590-8359.459Phascolarctos_cinereus
ENSPTRG00000051640-8744.246ENSPFOG00000013222upf3a8245.524Poecilia_formosa
ENSPTRG00000051640-8635.516ENSPLAG00000019922upf3b8738.287Poecilia_latipinna
ENSPTRG00000051640-8635.516ENSPLAG00000005105upf3b8639.744Poecilia_latipinna
ENSPTRG00000051640-8745.385ENSPLAG00000011960upf3a8344.872Poecilia_latipinna
ENSPTRG00000051640-8742.092ENSPMEG00000000836upf3a8243.796Poecilia_mexicana
ENSPTRG00000051640-8635.516ENSPMEG00000023532upf3b8738.287Poecilia_mexicana
ENSPTRG00000051640-9477.804ENSPPYG00000005536UPF3A9179.861Pongo_abelii
ENSPTRG00000051640-8637.192ENSPCAG00000009464UPF3B8341.019Procavia_capensis
ENSPTRG00000051640-6958.537ENSPCAG00000013124UPF3A7358.537Procavia_capensis
ENSPTRG00000051640-9037.410ENSPCOG00000021960UPF3B8741.330Propithecus_coquereli
ENSPTRG00000051640-9457.482ENSPVAG00000005656UPF3A9255.782Pteropus_vampyrus
ENSPTRG00000051640-8541.191ENSPNYG00000011289upf3a8142.928Pundamilia_nyererei
ENSPTRG00000051640-9634.375ENSPNAG00000021528upf3b9634.375Pygocentrus_nattereri
ENSPTRG00000051640-9442.005ENSPNAG00000019532upf3a8943.675Pygocentrus_nattereri
ENSPTRG00000051640-8156.011ENSRNOG00000017397Upf3a8756.164Rattus_norvegicus
ENSPTRG00000051640-9281.283ENSRBIG00000034007UPF3A9681.818Rhinopithecus_bieti
ENSPTRG00000051640-9281.283ENSRROG00000012212UPF3A8485.294Rhinopithecus_roxellana
ENSPTRG00000051640-8636.480ENSSBOG00000019740UPF3B7451.923Saimiri_boliviensis_boliviensis
ENSPTRG00000051640-8283.728ENSSBOG00000029989UPF3A8383.728Saimiri_boliviensis_boliviensis
ENSPTRG00000051640-8538.404ENSSHAG00000008634UPF3B8243.035Sarcophilus_harrisii
ENSPTRG00000051640-9254.988ENSSHAG00000009895UPF3A9756.341Sarcophilus_harrisii
ENSPTRG00000051640-5243.726ENSSFOG00015005614upf3b9339.723Scleropages_formosus
ENSPTRG00000051640-9242.787ENSSFOG00015021851upf3a8843.614Scleropages_formosus
ENSPTRG00000051640-9040.670ENSSDUG00000009680upf3a8542.344Seriola_dumerili
ENSPTRG00000051640-9042.289ENSSLDG00000009700upf3a8444.030Seriola_lalandi_dorsalis
ENSPTRG00000051640-8091.429ENSSARG00000007262UPF3A9753.234Sorex_araneus
ENSPTRG00000051640-8537.374ENSSPUG00000013082UPF3B8236.829Sphenodon_punctatus
ENSPTRG00000051640-8543.307ENSSPAG00000007938upf3a7457.764Stegastes_partitus
ENSPTRG00000051640-9035.577ENSSSCG00000012617UPF3B8740.238Sus_scrofa
ENSPTRG00000051640-9461.772ENSSSCG00000024679UPF3A8664.516Sus_scrofa
ENSPTRG00000051640-8554.450ENSTGUG00000009493UPF3A9755.759Taeniopygia_guttata
ENSPTRG00000051640-8638.462ENSTRUG00000010645upf3b8739.206Takifugu_rubripes
ENSPTRG00000051640-8543.864ENSTRUG00000012730upf3a8543.000Takifugu_rubripes
ENSPTRG00000051640-9038.903ENSTNIG00000015763upf3b8935.396Tetraodon_nigroviridis
ENSPTRG00000051640-8542.895ENSTNIG00000014973upf3a9642.895Tetraodon_nigroviridis
ENSPTRG00000051640-7147.239ENSTBEG00000017186-9949.693Tupaia_belangeri
ENSPTRG00000051640-8260.054ENSTTRG00000015414UPF3A7859.249Tursiops_truncatus
ENSPTRG00000051640-9035.280ENSUAMG00000024565UPF3B7669.355Ursus_americanus
ENSPTRG00000051640-9034.314ENSUMAG00000002150UPF3B8836.408Ursus_maritimus
ENSPTRG00000051640-9260.880ENSVPAG00000003525UPF3A10060.880Vicugna_pacos
ENSPTRG00000051640-8434.152ENSVPAG00000009971UPF3B9837.470Vicugna_pacos
ENSPTRG00000051640-8958.291ENSVVUG00000013538UPF3A8556.398Vulpes_vulpes
ENSPTRG00000051640-9035.749ENSVVUG00000011594UPF3B7674.242Vulpes_vulpes
ENSPTRG00000051640-8647.570ENSXETG00000002572upf3a8847.287Xenopus_tropicalis
ENSPTRG00000051640-8537.563ENSXETG00000007440upf3b8737.056Xenopus_tropicalis
ENSPTRG00000051640-8635.264ENSXMAG00000013680upf3b9336.916Xiphophorus_maculatus
ENSPTRG00000051640-8743.367ENSXMAG00000013452upf3a8245.153Xiphophorus_maculatus

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