EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000051760 (Gene tree)
Gene ID: 749744
Gene Symbol: RPUSD3
Alias: -
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 6209 bases
Position: chr3:10074742-10080950
Accession: 749744
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000078573	PseudoU_synth_2	PF00849.22	1.6e-19	1	1
ENSPTRP00000089706	PseudoU_synth_2	PF00849.22	3.5e-18	1	1
ENSPTRP00000062018	PseudoU_synth_2	PF00849.22	4.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000092711	RPUSD3-202	1182	XM_016940430	ENSPTRP00000062018	336 (aa)	XP_016795919	A0A2I3RBN3
ENSPTRT00000096902	RPUSD3-201	1252	XM_016940429	ENSPTRP00000078573	351 (aa)	XP_016795918	A0A2I3SNR3
ENSPTRT00000078272	RPUSD3-203	639	-	ENSPTRP00000089706	212 (aa)	-	A0A2I3TKF2

Gene Model

Click here to download ENSPTRG00000051760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000051760's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000051760	RPUSD3	100	98.113	ENSG00000156990	RPUSD3	100	98.113	Homo_sapiens
ENSPTRG00000051760	RPUSD3	99	80.516	ENSAMEG00000016227	RPUSD3	99	80.516	Ailuropoda_melanoleuca
ENSPTRG00000051760	RPUSD3	94	51.190	ENSACAG00000009836	RPUSD3	93	51.190	Anolis_carolinensis
ENSPTRG00000051760	RPUSD3	99	81.340	ENSANAG00000038118	-	98	81.340	Aotus_nancymaae
ENSPTRG00000051760	RPUSD3	91	90.674	ENSANAG00000019945	-	94	75.200	Aotus_nancymaae
ENSPTRG00000051760	RPUSD3	99	66.986	ENSANAG00000007127	-	100	66.986	Aotus_nancymaae
ENSPTRG00000051760	RPUSD3	95	83.663	ENSBTAG00000007968	RPUSD3	100	80.523	Bos_taurus
ENSPTRG00000051760	RPUSD3	100	80.114	ENSCAFG00000029733	RPUSD3	100	80.114	Canis_familiaris
ENSPTRG00000051760	RPUSD3	100	80.114	ENSCAFG00020008582	RPUSD3	100	80.114	Canis_lupus_dingo
ENSPTRG00000051760	RPUSD3	97	80.882	ENSCHIG00000026027	RPUSD3	99	80.882	Capra_hircus
ENSPTRG00000051760	RPUSD3	95	82.609	ENSTSYG00000009994	RPUSD3	96	82.609	Carlito_syrichta
ENSPTRG00000051760	RPUSD3	75	80.228	ENSCAPG00000017559	RPUSD3	99	80.228	Cavia_aperea
ENSPTRG00000051760	RPUSD3	99	67.816	ENSCPOG00000037956	RPUSD3	92	67.816	Cavia_porcellus
ENSPTRG00000051760	RPUSD3	100	91.038	ENSCCAG00000029530	RPUSD3	100	91.038	Cebus_capucinus
ENSPTRG00000051760	RPUSD3	100	93.868	ENSCATG00000036939	RPUSD3	100	93.868	Cercocebus_atys
ENSPTRG00000051760	RPUSD3	100	92.023	ENSCSAG00000010506	RPUSD3	100	92.023	Chlorocebus_sabaeus
ENSPTRG00000051760	RPUSD3	53	84.821	ENSCHOG00000010151	-	65	84.821	Choloepus_hoffmanni
ENSPTRG00000051760	RPUSD3	73	54.251	ENSCPBG00000008825	RPUSD3	95	52.140	Chrysemys_picta_bellii
ENSPTRG00000051760	RPUSD3	100	94.340	ENSCANG00000040711	RPUSD3	100	94.340	Colobus_angolensis_palliatus
ENSPTRG00000051760	RPUSD3	99	72.046	ENSCGRG00001004923	Rpusd3	96	72.046	Cricetulus_griseus_chok1gshd
ENSPTRG00000051760	RPUSD3	95	73.591	ENSCGRG00000018315	Rpusd3	98	73.591	Cricetulus_griseus_crigri
ENSPTRG00000051760	RPUSD3	99	76.504	ENSDNOG00000039160	RPUSD3	92	76.504	Dasypus_novemcinctus
ENSPTRG00000051760	RPUSD3	97	63.363	ENSDORG00000026827	Rpusd3	92	77.612	Dipodomys_ordii
ENSPTRG00000051760	RPUSD3	99	73.352	ENSETEG00000006538	RPUSD3	99	73.352	Echinops_telfairi
ENSPTRG00000051760	RPUSD3	81	37.356	ENSEBUG00000015605	RPUSD3	67	39.806	Eptatretus_burgeri
ENSPTRG00000051760	RPUSD3	100	80.966	ENSEASG00005014160	RPUSD3	98	80.966	Equus_asinus_asinus
ENSPTRG00000051760	RPUSD3	100	81.818	ENSECAG00000019988	RPUSD3	98	81.818	Equus_caballus
ENSPTRG00000051760	RPUSD3	95	57.522	ENSEEUG00000007353	RPUSD3	96	57.522	Erinaceus_europaeus
ENSPTRG00000051760	RPUSD3	99	81.375	ENSFCAG00000014199	RPUSD3	99	81.375	Felis_catus
ENSPTRG00000051760	RPUSD3	77	49.817	ENSFALG00000012968	RPUSD3	99	47.253	Ficedula_albicollis
ENSPTRG00000051760	RPUSD3	75	83.650	ENSFDAG00000008350	RPUSD3	81	83.650	Fukomys_damarensis
ENSPTRG00000051760	RPUSD3	75	54.753	ENSGAGG00000007493	RPUSD3	82	52.471	Gopherus_agassizii
ENSPTRG00000051760	RPUSD3	100	99.057	ENSGGOG00000013120	RPUSD3	100	99.057	Gorilla_gorilla
ENSPTRG00000051760	RPUSD3	87	78.804	ENSHGLG00000011722	RPUSD3	96	66.667	Heterocephalus_glaber_female
ENSPTRG00000051760	RPUSD3	87	78.804	ENSHGLG00100016038	RPUSD3	96	66.667	Heterocephalus_glaber_male
ENSPTRG00000051760	RPUSD3	100	77.273	ENSSTOG00000002125	RPUSD3	100	77.273	Ictidomys_tridecemlineatus
ENSPTRG00000051760	RPUSD3	98	72.674	ENSJJAG00000012679	Rpusd3	100	72.674	Jaculus_jaculus
ENSPTRG00000051760	RPUSD3	94	83.000	ENSLAFG00000017501	RPUSD3	98	81.845	Loxodonta_africana
ENSPTRG00000051760	RPUSD3	100	91.453	ENSMFAG00000032407	RPUSD3	100	91.453	Macaca_fascicularis
ENSPTRG00000051760	RPUSD3	100	91.369	ENSMMUG00000010628	RPUSD3	100	91.369	Macaca_mulatta
ENSPTRG00000051760	RPUSD3	100	91.168	ENSMNEG00000040308	RPUSD3	100	91.168	Macaca_nemestrina
ENSPTRG00000051760	RPUSD3	100	94.340	ENSMLEG00000033940	RPUSD3	100	94.340	Mandrillus_leucophaeus
ENSPTRG00000051760	RPUSD3	94	75.522	ENSMAUG00000015473	Rpusd3	97	75.522	Mesocricetus_auratus
ENSPTRG00000051760	RPUSD3	99	83.412	ENSMICG00000002315	RPUSD3	98	83.412	Microcebus_murinus
ENSPTRG00000051760	RPUSD3	97	72.434	ENSMOCG00000022613	Rpusd3	99	72.434	Microtus_ochrogaster
ENSPTRG00000051760	RPUSD3	99	54.958	ENSMODG00000005210	RPUSD3	89	54.958	Monodelphis_domestica
ENSPTRG00000051760	RPUSD3	98	72.674	MGP_CAROLIEiJ_G0028725	Rpusd3	100	72.674	Mus_caroli
ENSPTRG00000051760	RPUSD3	98	72.965	ENSMUSG00000051169	Rpusd3	100	72.965	Mus_musculus
ENSPTRG00000051760	RPUSD3	98	72.965	MGP_PahariEiJ_G0022476	Rpusd3	100	72.965	Mus_pahari
ENSPTRG00000051760	RPUSD3	98	72.674	MGP_SPRETEiJ_G0029753	Rpusd3	100	72.674	Mus_spretus
ENSPTRG00000051760	RPUSD3	100	78.693	ENSMPUG00000017132	RPUSD3	100	78.693	Mustela_putorius_furo
ENSPTRG00000051760	RPUSD3	98	83.526	ENSMLUG00000006135	RPUSD3	99	83.526	Myotis_lucifugus
ENSPTRG00000051760	RPUSD3	97	74.194	ENSNGAG00000023704	Rpusd3	99	74.194	Nannospalax_galili
ENSPTRG00000051760	RPUSD3	100	97.170	ENSNLEG00000004214	RPUSD3	100	97.170	Nomascus_leucogenys
ENSPTRG00000051760	RPUSD3	74	66.667	ENSMEUG00000013098	-	100	66.667	Notamacropus_eugenii
ENSPTRG00000051760	RPUSD3	97	63.529	ENSOPRG00000002300	RPUSD3	96	63.529	Ochotona_princeps
ENSPTRG00000051760	RPUSD3	75	78.030	ENSODEG00000018137	RPUSD3	91	78.030	Octodon_degus
ENSPTRG00000051760	RPUSD3	84	53.371	ENSOANG00000012081	-	99	51.579	Ornithorhynchus_anatinus
ENSPTRG00000051760	RPUSD3	89	79.474	ENSOCUG00000027885	RPUSD3	100	67.714	Oryctolagus_cuniculus
ENSPTRG00000051760	RPUSD3	95	83.744	ENSOGAG00000012592	RPUSD3	99	84.887	Otolemur_garnettii
ENSPTRG00000051760	RPUSD3	99	80.912	ENSOARG00000005928	RPUSD3	99	80.912	Ovis_aries
ENSPTRG00000051760	RPUSD3	100	99.715	ENSPPAG00000038083	RPUSD3	100	99.715	Pan_paniscus
ENSPTRG00000051760	RPUSD3	99	81.375	ENSPPRG00000024433	RPUSD3	99	81.375	Panthera_pardus
ENSPTRG00000051760	RPUSD3	99	82.036	ENSPTIG00000006828	RPUSD3	98	83.333	Panthera_tigris_altaica
ENSPTRG00000051760	RPUSD3	100	94.340	ENSPANG00000023885	RPUSD3	100	94.340	Papio_anubis
ENSPTRG00000051760	RPUSD3	98	72.674	ENSPEMG00000017245	Rpusd3	99	73.529	Peromyscus_maniculatus_bairdii
ENSPTRG00000051760	RPUSD3	96	59.050	ENSPCIG00000021901	RPUSD3	96	59.050	Phascolarctos_cinereus
ENSPTRG00000051760	RPUSD3	100	96.296	ENSPPYG00000013676	RPUSD3	100	96.296	Pongo_abelii
ENSPTRG00000051760	RPUSD3	95	58.911	ENSPCAG00000013731	-	100	60.208	Procavia_capensis
ENSPTRG00000051760	RPUSD3	99	85.673	ENSPCOG00000018314	RPUSD3	99	85.673	Propithecus_coquereli
ENSPTRG00000051760	RPUSD3	99	79.943	ENSPVAG00000011107	RPUSD3	99	79.943	Pteropus_vampyrus
ENSPTRG00000051760	RPUSD3	98	71.125	ENSRNOG00000009084	Rpusd3	100	71.125	Rattus_norvegicus
ENSPTRG00000051760	RPUSD3	100	95.283	ENSRBIG00000041230	RPUSD3	100	95.283	Rhinopithecus_bieti
ENSPTRG00000051760	RPUSD3	100	95.283	ENSRROG00000043328	RPUSD3	100	95.283	Rhinopithecus_roxellana
ENSPTRG00000051760	RPUSD3	100	88.319	ENSSBOG00000036106	RPUSD3	100	88.319	Saimiri_boliviensis_boliviensis
ENSPTRG00000051760	RPUSD3	95	57.921	ENSSHAG00000015536	RPUSD3	99	59.740	Sarcophilus_harrisii
ENSPTRG00000051760	RPUSD3	100	79.830	ENSSSCG00000011555	RPUSD3	100	79.830	Sus_scrofa
ENSPTRG00000051760	RPUSD3	73	47.742	ENSTGUG00000008744	RPUSD3	93	50.691	Taeniopygia_guttata
ENSPTRG00000051760	RPUSD3	95	80.198	ENSTBEG00000000176	RPUSD3	100	77.509	Tupaia_belangeri
ENSPTRG00000051760	RPUSD3	100	79.261	ENSTTRG00000007544	RPUSD3	100	79.261	Tursiops_truncatus
ENSPTRG00000051760	RPUSD3	96	82.439	ENSUAMG00000011354	RPUSD3	97	82.315	Ursus_americanus
ENSPTRG00000051760	RPUSD3	99	80.229	ENSUMAG00000018830	RPUSD3	99	80.229	Ursus_maritimus
ENSPTRG00000051760	RPUSD3	99	82.547	ENSVVUG00000023735	RPUSD3	98	82.196	Vulpes_vulpes
ENSPTRG00000051760	RPUSD3	81	50.289	ENSXETG00000023546	rpusd3	99	49.822	Xenopus_tropicalis