EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000052356 (Gene tree)
Gene ID: 107966406
Gene Symbol: -
Alias: -
Full Name: SON DNA binding protein
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 34525 bases
Position: chrKV421332.1:950170-984694
Accession: 107966406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000078353	DND1_DSRM	PF14709.7	4.6e-09	1	1
ENSPTRP00000072700	DND1_DSRM	PF14709.7	2.5e-08	1	1
ENSPTRP00000078353	G-patch	PF01585.23	2.3e-16	1	1
ENSPTRP00000072700	G-patch	PF01585.23	4.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000098890	-	8441	XM_009455289	ENSPTRP00000078353	119 (aa)	XP_009453564	A0A2I3SN58
ENSPTRT00000102921	-	1365	XM_001165975	ENSPTRP00000072700	454 (aa)	XP_001165975	A0A2I3T192

Gene Model

Click here to download ENSPTRG00000052356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000052356's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000052356	-	100	100.000	ENSPTRG00000013872	SON	100	100.000
ENSPTRG00000052356	-	97	94.828	ENSPTRG00000050558	-	96	94.828

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000052356	-	100	100.000	ENSG00000159140	SON	100	99.119	Homo_sapiens
ENSPTRG00000052356	-	100	58.824	ENSACIG00000017870	-	94	64.356	Amphilophus_citrinellus
ENSPTRG00000052356	-	92	63.636	ENSATEG00000012732	-	53	51.801	Anabas_testudineus
ENSPTRG00000052356	-	93	81.081	ENSAPLG00000008908	-	91	73.349	Anas_platyrhynchos
ENSPTRG00000052356	-	98	75.214	ENSACAG00000004681	-	99	73.068	Anolis_carolinensis
ENSPTRG00000052356	-	100	100.000	ENSANAG00000035426	SON	100	100.000	Aotus_nancymaae
ENSPTRG00000052356	-	100	57.983	ENSACLG00000007098	-	88	51.497	Astatotilapia_calliptera
ENSPTRG00000052356	-	100	100.000	ENSCJAG00000046975	SON	100	99.559	Callithrix_jacchus
ENSPTRG00000052356	-	100	100.000	ENSCAFG00020025305	SON	100	99.559	Canis_lupus_dingo
ENSPTRG00000052356	-	100	100.000	ENSTSYG00000008371	SON	100	98.678	Carlito_syrichta
ENSPTRG00000052356	-	100	100.000	ENSCPOG00000024278	SON	100	98.899	Cavia_porcellus
ENSPTRG00000052356	-	100	100.000	ENSCCAG00000030234	SON	100	100.000	Cebus_capucinus
ENSPTRG00000052356	-	100	100.000	ENSCATG00000029812	SON	100	100.000	Cercocebus_atys
ENSPTRG00000052356	-	100	100.000	ENSCLAG00000011776	SON	100	99.119	Chinchilla_lanigera
ENSPTRG00000052356	-	97	77.778	ENSCPBG00000005420	-	97	77.778	Chrysemys_picta_bellii
ENSPTRG00000052356	-	93	58.559	ENSCING00000007049	-	85	40.000	Ciona_intestinalis
ENSPTRG00000052356	-	100	100.000	ENSCANG00000025986	SON	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000052356	-	100	100.000	ENSCGRG00001016220	Son	100	98.018	Cricetulus_griseus_chok1gshd
ENSPTRG00000052356	-	100	100.000	ENSCGRG00000015260	Son	100	98.598	Cricetulus_griseus_crigri
ENSPTRG00000052356	-	95	64.602	ENSCSEG00000004020	-	94	64.602	Cynoglossus_semilaevis
ENSPTRG00000052356	-	83	62.626	ENSCVAG00000003298	-	100	62.626	Cyprinodon_variegatus
ENSPTRG00000052356	-	85	72.277	ENSDARG00000114730	CABZ01113192.1	96	72.277	Danio_rerio
ENSPTRG00000052356	-	100	100.000	ENSDORG00000028617	-	100	99.119	Dipodomys_ordii
ENSPTRG00000052356	-	92	67.273	ENSELUG00000003878	-	78	59.928	Esox_lucius
ENSPTRG00000052356	-	100	100.000	ENSFCAG00000028680	-	100	99.780	Felis_catus
ENSPTRG00000052356	-	93	81.081	ENSFALG00000002365	-	91	71.364	Ficedula_albicollis
ENSPTRG00000052356	-	100	100.000	ENSFDAG00000019128	SON	100	98.678	Fukomys_damarensis
ENSPTRG00000052356	-	93	63.964	ENSGMOG00000000602	-	92	65.138	Gadus_morhua
ENSPTRG00000052356	-	92	81.818	ENSGALG00000052354	-	99	73.423	Gallus_gallus
ENSPTRG00000052356	-	94	63.393	ENSGACG00000015357	-	94	63.393	Gasterosteus_aculeatus
ENSPTRG00000052356	-	100	100.000	ENSGGOG00000010481	SON	100	100.000	Gorilla_gorilla
ENSPTRG00000052356	-	100	100.000	ENSHGLG00000010432	SON	100	98.899	Heterocephalus_glaber_female
ENSPTRG00000052356	-	82	62.245	ENSHCOG00000018124	-	100	62.245	Hippocampus_comes
ENSPTRG00000052356	-	100	100.000	ENSSTOG00000020593	SON	100	98.899	Ictidomys_tridecemlineatus
ENSPTRG00000052356	-	100	100.000	ENSJJAG00000013491	-	100	98.899	Jaculus_jaculus
ENSPTRG00000052356	-	93	76.106	ENSLACG00000013385	-	92	66.154	Latimeria_chalumnae
ENSPTRG00000052356	-	93	74.775	ENSLOCG00000011021	-	68	65.583	Lepisosteus_oculatus
ENSPTRG00000052356	-	100	100.000	ENSMFAG00000034427	SON	100	100.000	Macaca_fascicularis
ENSPTRG00000052356	-	100	100.000	ENSMMUG00000005511	SON	100	100.000	Macaca_mulatta
ENSPTRG00000052356	-	100	100.000	ENSMNEG00000031671	SON	100	100.000	Macaca_nemestrina
ENSPTRG00000052356	-	100	100.000	ENSMLEG00000035039	SON	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000052356	-	93	81.081	ENSMGAG00000014526	-	84	71.351	Meleagris_gallopavo
ENSPTRG00000052356	-	100	100.000	ENSMAUG00000002086	-	100	98.238	Mesocricetus_auratus
ENSPTRG00000052356	-	100	100.000	ENSMICG00000033920	SON	100	99.559	Microcebus_murinus
ENSPTRG00000052356	-	100	100.000	ENSMOCG00000012860	-	100	98.018	Microtus_ochrogaster
ENSPTRG00000052356	-	85	66.337	ENSMMOG00000004648	-	81	66.337	Mola_mola
ENSPTRG00000052356	-	92	64.545	ENSMALG00000006263	-	91	53.106	Monopterus_albus
ENSPTRG00000052356	-	100	100.000	MGP_CAROLIEiJ_G0020965	Son	100	98.458	Mus_caroli
ENSPTRG00000052356	-	100	100.000	ENSMUSG00000022961	Son	100	98.238	Mus_musculus
ENSPTRG00000052356	-	100	100.000	MGP_PahariEiJ_G0016670	Son	100	98.238	Mus_pahari
ENSPTRG00000052356	-	100	100.000	MGP_SPRETEiJ_G0021871	Son	100	98.238	Mus_spretus
ENSPTRG00000052356	-	100	100.000	ENSNGAG00000000062	-	100	98.238	Nannospalax_galili
ENSPTRG00000052356	-	83	51.515	ENSNBRG00000015073	-	100	51.515	Neolamprologus_brichardi
ENSPTRG00000052356	-	100	100.000	ENSNLEG00000004002	SON	100	100.000	Nomascus_leucogenys
ENSPTRG00000052356	-	100	100.000	ENSODEG00000003658	-	100	98.678	Octodon_degus
ENSPTRG00000052356	-	100	76.667	ENSODEG00000008629	-	99	76.667	Octodon_degus
ENSPTRG00000052356	-	100	89.167	ENSODEG00000004500	-	98	89.167	Octodon_degus
ENSPTRG00000052356	-	92	63.636	ENSONIG00000003775	-	73	56.522	Oreochromis_niloticus
ENSPTRG00000052356	-	85	65.347	ENSORLG00020014016	-	91	47.101	Oryzias_latipes_hni
ENSPTRG00000052356	-	99	59.322	ENSORLG00015016415	-	78	50.234	Oryzias_latipes_hsok
ENSPTRG00000052356	-	87	61.538	ENSOMEG00000010811	-	100	61.538	Oryzias_melastigma
ENSPTRG00000052356	-	100	100.000	ENSPPAG00000033712	SON	100	100.000	Pan_paniscus
ENSPTRG00000052356	-	97	84.483	ENSPPAG00000035874	-	95	84.483	Pan_paniscus
ENSPTRG00000052356	-	100	100.000	ENSPPRG00000019353	SON	100	99.780	Panthera_pardus
ENSPTRG00000052356	-	100	100.000	ENSPTIG00000017100	SON	100	99.780	Panthera_tigris_altaica
ENSPTRG00000052356	-	100	100.000	ENSPANG00000024077	SON	100	100.000	Papio_anubis
ENSPTRG00000052356	-	93	81.982	ENSPSIG00000008097	-	91	72.851	Pelodiscus_sinensis
ENSPTRG00000052356	-	85	64.356	ENSPMGG00000015598	-	93	51.566	Periophthalmus_magnuspinnatus
ENSPTRG00000052356	-	100	100.000	ENSPCIG00000012884	-	100	97.577	Phascolarctos_cinereus
ENSPTRG00000052356	-	100	100.000	ENSPCOG00000015502	SON	100	99.559	Propithecus_coquereli
ENSPTRG00000052356	-	94	61.947	ENSPNYG00000022376	-	100	61.947	Pundamilia_nyererei
ENSPTRG00000052356	-	100	100.000	ENSRBIG00000044269	-	100	100.000	Rhinopithecus_bieti
ENSPTRG00000052356	-	100	100.000	ENSRROG00000042156	SON	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000052356	-	100	100.000	ENSSBOG00000020885	SON	100	100.000	Saimiri_boliviensis_boliviensis
ENSPTRG00000052356	-	100	93.902	ENSSHAG00000008266	SON	63	89.863	Sarcophilus_harrisii
ENSPTRG00000052356	-	84	65.000	ENSSLDG00000013582	-	95	65.000	Seriola_lalandi_dorsalis
ENSPTRG00000052356	-	95	69.932	ENSTGUG00000000486	-	91	69.932	Taeniopygia_guttata
ENSPTRG00000052356	-	92	66.364	ENSTNIG00000014468	-	98	53.422	Tetraodon_nigroviridis
ENSPTRG00000052356	-	92	68.182	ENSXETG00000014115	son	83	70.380	Xenopus_tropicalis
ENSPTRG00000052356	-	85	64.356	ENSXCOG00000020356	-	99	64.356	Xiphophorus_couchianus