EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000052516 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 631 bases
Position: chr22:18853126-18853756
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000091616	CPSF_A	PF03178.15	5.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000099072	-	552	-	ENSPTRP00000091616	183 (aa)	-	A0A2I3TQU6

Gene Model

Click here to download ENSPTRG00000052516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000052516's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000052516	-	100	69.444	ENSPTRG00000049288	-	100	62.963
ENSPTRG00000052516	-	100	69.444	ENSPTRG00000051253	-	100	62.963

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000052516	-	100	69.444	ENSG00000071894	CPSF1	100	61.765	Homo_sapiens
ENSPTRG00000052516	-	100	68.981	ENSTSYG00000028560	CPSF1	100	61.765	Carlito_syrichta
ENSPTRG00000052516	-	100	69.444	ENSCCAG00000037658	CPSF1	100	62.981	Cebus_capucinus
ENSPTRG00000052516	-	100	69.444	ENSCATG00000037234	CPSF1	100	61.765	Cercocebus_atys
ENSPTRG00000052516	-	96	39.409	ENSCSAVG00000002293	-	93	39.409	Ciona_savignyi
ENSPTRG00000052516	-	97	62.319	ENSCANG00000032760	CPSF1	100	61.905	Colobus_angolensis_palliatus
ENSPTRG00000052516	-	100	60.185	ENSCVAG00000014059	cpsf1	100	53.431	Cyprinodon_variegatus
ENSPTRG00000052516	-	89	51.795	ENSEBUG00000006844	-	50	51.795	Eptatretus_burgeri
ENSPTRG00000052516	-	100	69.444	ENSGGOG00000016185	CPSF1	100	61.765	Gorilla_gorilla
ENSPTRG00000052516	-	100	95.082	ENSGGOG00000040487	-	100	95.082	Gorilla_gorilla
ENSPTRG00000052516	-	100	69.444	ENSMFAG00000037013	CPSF1	100	61.765	Macaca_fascicularis
ENSPTRG00000052516	-	100	69.444	ENSMMUG00000007380	CPSF1	100	61.765	Macaca_mulatta
ENSPTRG00000052516	-	100	69.444	ENSMNEG00000043564	CPSF1	100	61.765	Macaca_nemestrina
ENSPTRG00000052516	-	100	69.444	ENSMLEG00000043010	CPSF1	100	61.765	Mandrillus_leucophaeus
ENSPTRG00000052516	-	100	68.981	ENSMUSG00000034022	Cpsf1	99	51.534	Mus_musculus
ENSPTRG00000052516	-	84	70.000	ENSMLUG00000000667	-	100	70.000	Myotis_lucifugus
ENSPTRG00000052516	-	100	57.207	ENSNLEG00000010633	-	85	69.540	Nomascus_leucogenys
ENSPTRG00000052516	-	100	69.444	ENSPPAG00000019280	CPSF1	100	62.963	Pan_paniscus
ENSPTRG00000052516	-	100	69.444	ENSPANG00000015005	CPSF1	100	61.765	Papio_anubis
ENSPTRG00000052516	-	100	61.574	ENSPMGG00000022177	-	100	61.574	Periophthalmus_magnuspinnatus
ENSPTRG00000052516	-	97	62.621	ENSPCOG00000020001	CPSF1	100	62.621	Propithecus_coquereli
ENSPTRG00000052516	-	100	69.444	ENSRBIG00000044907	CPSF1	100	61.765	Rhinopithecus_bieti
ENSPTRG00000052516	-	100	69.444	ENSRROG00000044861	CPSF1	100	61.765	Rhinopithecus_roxellana
ENSPTRG00000052516	-	100	65.741	ENSSPUG00000014396	CPSF1	100	58.738	Sphenodon_punctatus
ENSPTRG00000052516	-	97	62.136	ENSVVUG00000005940	-	100	62.136	Vulpes_vulpes