EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000052688 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 356 bases
Position: chr15:63633063-63633418
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000083753	RRM_1	PF00076.22	5.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000077880	-	336	-	ENSPTRP00000083753	111 (aa)	-	A0A2I3T3F2

Gene Model

Click here to download ENSPTRG00000052688's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000052688's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000052688	-	76	42.857	ENSPTRG00000044686	-	59	42.857
ENSPTRG00000052688	-	95	54.545	ENSPTRG00000049077	SRSF1	84	65.574
ENSPTRG00000052688	-	50	55.357	ENSPTRG00000006488	SRSF5	77	44.444
ENSPTRG00000052688	-	75	36.145	ENSPTRG00000018106	SRSF3	65	36.145
ENSPTRG00000052688	-	97	69.600	ENSPTRG00000005535	SRSF9	97	76.724

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000052688	-	97	69.600	ENSG00000111786	SRSF9	97	76.724	Homo_sapiens
ENSPTRG00000052688	-	95	76.991	ENSAMEG00000013294	SRSF9	53	76.991	Ailuropoda_melanoleuca
ENSPTRG00000052688	-	96	70.940	ENSANAG00000035910	SRSF9	51	77.876	Aotus_nancymaae
ENSPTRG00000052688	-	97	66.400	ENSBTAG00000005584	-	55	72.131	Bos_taurus
ENSPTRG00000052688	-	97	67.200	ENSBTAG00000012792	SRSF9	55	72.951	Bos_taurus
ENSPTRG00000052688	-	97	69.600	ENSCJAG00000001187	SRSF9	97	76.724	Callithrix_jacchus
ENSPTRG00000052688	-	97	75.410	ENSCAFG00000010314	SRSF9	55	75.410	Canis_familiaris
ENSPTRG00000052688	-	97	75.410	ENSCAFG00020020612	SRSF9	55	75.410	Canis_lupus_dingo
ENSPTRG00000052688	-	97	67.200	ENSCHIG00000025274	SRSF9	55	72.951	Capra_hircus
ENSPTRG00000052688	-	97	66.667	ENSTSYG00000034124	-	52	67.857	Carlito_syrichta
ENSPTRG00000052688	-	97	65.546	ENSTSYG00000036169	-	54	65.546	Carlito_syrichta
ENSPTRG00000052688	-	95	75.833	ENSTSYG00000006848	-	54	75.833	Carlito_syrichta
ENSPTRG00000052688	-	97	68.800	ENSCPOG00000033486	SRSF9	55	74.590	Cavia_porcellus
ENSPTRG00000052688	-	97	69.600	ENSCCAG00000036053	SRSF9	97	76.724	Cebus_capucinus
ENSPTRG00000052688	-	97	69.600	ENSCATG00000021315	SRSF9	97	76.724	Cercocebus_atys
ENSPTRG00000052688	-	97	68.800	ENSCLAG00000012289	SRSF9	55	74.590	Chinchilla_lanigera
ENSPTRG00000052688	-	97	69.600	ENSCSAG00000002257	SRSF9	55	75.410	Chlorocebus_sabaeus
ENSPTRG00000052688	-	92	66.087	ENSCPBG00000011340	SRSF9	52	69.828	Chrysemys_picta_bellii
ENSPTRG00000052688	-	97	73.770	ENSCGRG00001021965	Srsf9	55	73.770	Cricetulus_griseus_chok1gshd
ENSPTRG00000052688	-	96	61.404	ENSCSEG00000015663	srsf9	51	61.404	Cynoglossus_semilaevis
ENSPTRG00000052688	-	97	69.600	ENSDNOG00000012598	SRSF9	55	75.410	Dasypus_novemcinctus
ENSPTRG00000052688	-	97	72.951	ENSDORG00000013162	Srsf9	55	72.951	Dipodomys_ordii
ENSPTRG00000052688	-	97	47.009	ENSETEG00000002606	SRSF9	53	47.009	Echinops_telfairi
ENSPTRG00000052688	-	97	69.600	ENSEASG00005004727	SRSF9	55	75.410	Equus_asinus_asinus
ENSPTRG00000052688	-	97	69.600	ENSECAG00000009116	SRSF9	97	76.724	Equus_caballus
ENSPTRG00000052688	-	97	75.410	ENSFCAG00000011011	SRSF9	55	75.410	Felis_catus
ENSPTRG00000052688	-	92	51.613	ENSGMOG00000007980	srsf9	54	44.966	Gadus_morhua
ENSPTRG00000052688	-	95	53.279	ENSGAFG00000009123	srsf9	55	55.932	Gambusia_affinis
ENSPTRG00000052688	-	91	52.344	ENSGACG00000016921	srsf9	50	53.435	Gasterosteus_aculeatus
ENSPTRG00000052688	-	92	66.087	ENSGAGG00000016015	SRSF9	50	69.828	Gopherus_agassizii
ENSPTRG00000052688	-	100	86.486	ENSGGOG00000022012	-	100	86.486	Gorilla_gorilla
ENSPTRG00000052688	-	98	44.628	ENSGGOG00000027142	-	52	50.427	Gorilla_gorilla
ENSPTRG00000052688	-	97	68.800	ENSHGLG00000014372	SRSF9	55	74.590	Heterocephalus_glaber_female
ENSPTRG00000052688	-	97	68.800	ENSHGLG00100013695	SRSF9	55	74.590	Heterocephalus_glaber_male
ENSPTRG00000052688	-	88	59.615	ENSHCOG00000017326	srsf9	87	59.615	Hippocampus_comes
ENSPTRG00000052688	-	89	61.905	ENSHCOG00000018428	-	84	61.905	Hippocampus_comes
ENSPTRG00000052688	-	97	69.600	ENSSTOG00000007344	SRSF9	97	76.724	Ictidomys_tridecemlineatus
ENSPTRG00000052688	-	97	72.131	ENSJJAG00000013374	Srsf9	55	72.131	Jaculus_jaculus
ENSPTRG00000052688	-	91	61.682	ENSLBEG00000017430	srsf9	52	48.921	Labrus_bergylta
ENSPTRG00000052688	-	95	60.345	ENSLACG00000018228	SRSF9	51	62.069	Latimeria_chalumnae
ENSPTRG00000052688	-	98	66.957	ENSMMUG00000040941	-	57	69.091	Macaca_mulatta
ENSPTRG00000052688	-	97	69.600	ENSMNEG00000044129	SRSF9	97	76.724	Macaca_nemestrina
ENSPTRG00000052688	-	92	72.321	ENSMLEG00000041155	SRSF9	52	79.630	Mandrillus_leucophaeus
ENSPTRG00000052688	-	97	72.951	ENSMAUG00000011403	Srsf9	55	72.951	Mesocricetus_auratus
ENSPTRG00000052688	-	97	69.600	ENSMICG00000008674	SRSF9	97	76.724	Microcebus_murinus
ENSPTRG00000052688	-	90	78.505	ENSMOCG00000021163	Srsf9	55	73.770	Microtus_ochrogaster
ENSPTRG00000052688	-	94	72.222	ENSMODG00000003146	SRSF9	50	74.074	Monodelphis_domestica
ENSPTRG00000052688	-	95	60.360	ENSMALG00000011678	srsf9	50	53.077	Monopterus_albus
ENSPTRG00000052688	-	95	74.167	MGP_CAROLIEiJ_G0027622	Srsf9	54	74.167	Mus_caroli
ENSPTRG00000052688	-	95	74.167	ENSMUSG00000029538	Srsf9	56	85.714	Mus_musculus
ENSPTRG00000052688	-	95	74.167	MGP_SPRETEiJ_G0028620	Srsf9	54	74.167	Mus_spretus
ENSPTRG00000052688	-	94	76.271	ENSMPUG00000003193	SRSF9	53	76.271	Mustela_putorius_furo
ENSPTRG00000052688	-	97	67.717	ENSMLUG00000010346	SRSF9	55	73.387	Myotis_lucifugus
ENSPTRG00000052688	-	97	72.951	ENSNGAG00000012738	Srsf9	55	72.951	Nannospalax_galili
ENSPTRG00000052688	-	97	85.217	ENSNLEG00000033316	-	93	85.965	Nomascus_leucogenys
ENSPTRG00000052688	-	97	69.600	ENSNLEG00000015661	SRSF9	97	76.724	Nomascus_leucogenys
ENSPTRG00000052688	-	97	66.116	ENSMEUG00000004069	SRSF9	78	67.213	Notamacropus_eugenii
ENSPTRG00000052688	-	97	74.590	ENSOPRG00000004234	SRSF9	55	74.590	Ochotona_princeps
ENSPTRG00000052688	-	94	68.595	ENSODEG00000006061	SRSF9	97	74.576	Octodon_degus
ENSPTRG00000052688	-	97	68.000	ENSOCUG00000024603	SRSF9	55	73.770	Oryctolagus_cuniculus
ENSPTRG00000052688	-	97	68.800	ENSOGAG00000003852	SRSF9	55	73.770	Otolemur_garnettii
ENSPTRG00000052688	-	97	67.200	ENSOARG00000012402	SRSF9	54	72.951	Ovis_aries
ENSPTRG00000052688	-	100	100.000	ENSPPAG00000026547	-	100	100.000	Pan_paniscus
ENSPTRG00000052688	-	97	75.410	ENSPPRG00000001309	SRSF9	55	75.410	Panthera_pardus
ENSPTRG00000052688	-	97	69.600	ENSPANG00000016072	SRSF9	97	76.724	Papio_anubis
ENSPTRG00000052688	-	97	73.770	ENSPEMG00000016311	Srsf9	55	73.770	Peromyscus_maniculatus_bairdii
ENSPTRG00000052688	-	97	66.116	ENSPCIG00000025998	SRSF9	51	67.213	Phascolarctos_cinereus
ENSPTRG00000052688	-	98	67.460	ENSPPYG00000029896	-	55	73.770	Pongo_abelii
ENSPTRG00000052688	-	97	69.600	ENSPPYG00000005031	-	55	75.410	Pongo_abelii
ENSPTRG00000052688	-	97	69.600	ENSPPYG00000019910	-	55	75.410	Pongo_abelii
ENSPTRG00000052688	-	97	69.600	ENSPCOG00000015115	SRSF9	97	76.724	Propithecus_coquereli
ENSPTRG00000052688	-	97	69.600	ENSPVAG00000002229	SRSF9	55	75.410	Pteropus_vampyrus
ENSPTRG00000052688	-	97	73.770	ENSRNOG00000001163	Srsf9	55	73.770	Rattus_norvegicus
ENSPTRG00000052688	-	93	53.968	ENSSLDG00000012305	srsf9	50	55.469	Seriola_lalandi_dorsalis
ENSPTRG00000052688	-	91	66.667	ENSSPUG00000015680	SRSF9	50	68.376	Sphenodon_punctatus
ENSPTRG00000052688	-	97	69.600	ENSSSCG00000009906	SRSF9	55	75.410	Sus_scrofa
ENSPTRG00000052688	-	84	70.874	ENSTBEG00000008499	SRSF9	50	78.788	Tupaia_belangeri
ENSPTRG00000052688	-	83	71.569	ENSTTRG00000000145	SRSF9	50	79.592	Tursiops_truncatus
ENSPTRG00000052688	-	97	69.600	ENSUAMG00000015527	SRSF9	97	76.724	Ursus_americanus
ENSPTRG00000052688	-	97	75.410	ENSVVUG00000021065	SRSF9	97	76.724	Vulpes_vulpes
ENSPTRG00000052688	-	95	55.462	ENSXETG00000026940	srsf9	52	54.545	Xenopus_tropicalis
ENSPTRG00000052688	-	95	54.098	ENSXMAG00000001438	srsf9	55	56.780	Xiphophorus_maculatus