EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000000261 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 71829 bases
Position: chrGeneScaffold_3765:3345-75173
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000000239	ResIII	PF04851.15	6.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000000261	-	2598	-	ENSPVAP00000000239	865 (aa)	-	UPI00018B18A9

Gene Model

Click here to download ENSPVAG00000000261's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000000261's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000000261	-	55	31.445	ENSPVAG00000003926	ERCC6L2	71	31.445

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000000261	-	84	90.345	ENSG00000265817	FSBP	99	90.345	Homo_sapiens
ENSPVAG00000000261	-	92	90.283	ENSG00000197275	RAD54B	87	90.283	Homo_sapiens
ENSPVAG00000000261	-	92	90.283	ENSAMEG00000005834	-	87	90.283	Ailuropoda_melanoleuca
ENSPVAG00000000261	-	86	57.543	ENSACIG00000013005	rad54b	84	57.543	Amphilophus_citrinellus
ENSPVAG00000000261	-	85	58.926	ENSAOCG00000008523	rad54b	80	58.926	Amphiprion_ocellaris
ENSPVAG00000000261	-	86	57.873	ENSAPEG00000001673	rad54b	84	58.008	Amphiprion_percula
ENSPVAG00000000261	-	86	57.656	ENSATEG00000001527	rad54b	85	57.636	Anabas_testudineus
ENSPVAG00000000261	-	86	73.755	ENSAPLG00000014366	-	81	73.755	Anas_platyrhynchos
ENSPVAG00000000261	-	85	69.730	ENSACAG00000003671	-	92	69.730	Anolis_carolinensis
ENSPVAG00000000261	-	75	88.889	ENSANAG00000019528	-	99	88.889	Aotus_nancymaae
ENSPVAG00000000261	-	86	57.810	ENSACLG00000007826	rad54b	86	57.810	Astatotilapia_calliptera
ENSPVAG00000000261	-	85	56.952	ENSAMXG00000039985	rad54b	89	56.785	Astyanax_mexicanus
ENSPVAG00000000261	-	92	89.218	ENSBTAG00000000632	RAD54B	88	89.218	Bos_taurus
ENSPVAG00000000261	-	63	38.989	WBGene00013792	Y116A8C.13	71	38.989	Caenorhabditis_elegans
ENSPVAG00000000261	-	92	88.799	ENSCJAG00000000080	-	99	88.828	Callithrix_jacchus
ENSPVAG00000000261	-	92	88.799	ENSCAFG00000009179	RAD54B	87	88.799	Canis_familiaris
ENSPVAG00000000261	-	92	88.934	ENSCAFG00020012084	-	87	88.934	Canis_lupus_dingo
ENSPVAG00000000261	-	92	88.949	ENSCHIG00000008230	-	88	88.949	Capra_hircus
ENSPVAG00000000261	-	92	87.989	ENSTSYG00000013234	-	87	87.989	Carlito_syrichta
ENSPVAG00000000261	-	86	86.351	ENSCPOG00000011643	-	88	86.351	Cavia_porcellus
ENSPVAG00000000261	-	92	88.799	ENSCCAG00000011754	-	99	88.828	Cebus_capucinus
ENSPVAG00000000261	-	92	89.744	ENSCATG00000030661	-	99	89.793	Cercocebus_atys
ENSPVAG00000000261	-	92	86.757	ENSCLAG00000010476	-	88	86.757	Chinchilla_lanigera
ENSPVAG00000000261	-	92	89.744	ENSCSAG00000012712	-	87	89.744	Chlorocebus_sabaeus
ENSPVAG00000000261	-	86	74.293	ENSCPBG00000003204	-	81	74.293	Chrysemys_picta_bellii
ENSPVAG00000000261	-	92	89.879	ENSCANG00000017939	-	99	89.931	Colobus_angolensis_palliatus
ENSPVAG00000000261	-	86	81.916	ENSCGRG00001020184	Rad54b	84	81.916	Cricetulus_griseus_chok1gshd
ENSPVAG00000000261	-	86	80.567	ENSCGRG00000016752	Rad54b	83	80.567	Cricetulus_griseus_crigri
ENSPVAG00000000261	-	86	56.991	ENSCSEG00000001601	rad54b	88	56.991	Cynoglossus_semilaevis
ENSPVAG00000000261	-	85	59.623	ENSCVAG00000009200	rad54b	84	59.623	Cyprinodon_variegatus
ENSPVAG00000000261	-	86	57.769	ENSDARG00000092134	rad54b	99	60.676	Danio_rerio
ENSPVAG00000000261	-	92	86.694	ENSDNOG00000015535	-	87	86.694	Dasypus_novemcinctus
ENSPVAG00000000261	-	92	85.560	ENSDORG00000002492	Rad54b	88	85.560	Dipodomys_ordii
ENSPVAG00000000261	-	72	87.581	ENSETEG00000010605	-	79	87.581	Echinops_telfairi
ENSPVAG00000000261	-	85	49.867	ENSEBUG00000009104	rad54b	79	49.867	Eptatretus_burgeri
ENSPVAG00000000261	-	92	88.934	ENSEASG00005004021	-	98	81.134	Equus_asinus_asinus
ENSPVAG00000000261	-	92	89.339	ENSECAG00000021949	-	87	89.339	Equus_caballus
ENSPVAG00000000261	-	76	85.000	ENSEEUG00000008056	-	72	85.000	Erinaceus_europaeus
ENSPVAG00000000261	-	86	57.867	ENSELUG00000009287	rad54b	79	57.810	Esox_lucius
ENSPVAG00000000261	-	92	89.879	ENSFCAG00000015513	-	99	90.345	Felis_catus
ENSPVAG00000000261	-	86	73.289	ENSFALG00000005467	-	81	73.289	Ficedula_albicollis
ENSPVAG00000000261	-	91	87.027	ENSFDAG00000020541	-	87	87.027	Fukomys_damarensis
ENSPVAG00000000261	-	86	56.649	ENSFHEG00000014382	rad54b	82	56.649	Fundulus_heteroclitus
ENSPVAG00000000261	-	86	55.159	ENSGMOG00000014774	rad54b	93	55.159	Gadus_morhua
ENSPVAG00000000261	-	86	72.813	ENSGALG00000043597	RAD54B	81	72.813	Gallus_gallus
ENSPVAG00000000261	-	86	58.267	ENSGAFG00000007901	rad54b	87	58.211	Gambusia_affinis
ENSPVAG00000000261	-	86	57.992	ENSGACG00000009128	rad54b	81	57.992	Gasterosteus_aculeatus
ENSPVAG00000000261	-	85	74.730	ENSGAGG00000018747	-	80	74.730	Gopherus_agassizii
ENSPVAG00000000261	-	92	90.148	ENSGGOG00000023516	-	88	90.148	Gorilla_gorilla
ENSPVAG00000000261	-	86	57.733	ENSHBUG00000016017	rad54b	80	57.733	Haplochromis_burtoni
ENSPVAG00000000261	-	92	85.389	ENSHGLG00000008263	RAD54B	87	85.389	Heterocephalus_glaber_female
ENSPVAG00000000261	-	92	84.309	ENSHGLG00100008108	-	87	84.309	Heterocephalus_glaber_male
ENSPVAG00000000261	-	85	55.601	ENSHCOG00000004764	rad54b	92	53.977	Hippocampus_comes
ENSPVAG00000000261	-	86	57.447	ENSIPUG00000018531	rad54b	79	57.447	Ictalurus_punctatus
ENSPVAG00000000261	-	91	86.005	ENSSTOG00000010791	-	86	86.005	Ictidomys_tridecemlineatus
ENSPVAG00000000261	-	86	83.671	ENSJJAG00000010314	Rad54b	81	83.671	Jaculus_jaculus
ENSPVAG00000000261	-	86	56.667	ENSKMAG00000004744	rad54b	87	56.667	Kryptolebias_marmoratus
ENSPVAG00000000261	-	85	68.868	ENSLACG00000000859	-	99	68.868	Latimeria_chalumnae
ENSPVAG00000000261	-	86	61.620	ENSLOCG00000010100	rad54b	88	62.000	Lepisosteus_oculatus
ENSPVAG00000000261	-	86	88.664	ENSLAFG00000015315	-	92	88.664	Loxodonta_africana
ENSPVAG00000000261	-	92	89.474	ENSMFAG00000031629	-	99	89.517	Macaca_fascicularis
ENSPVAG00000000261	-	92	89.474	ENSMMUG00000005659	-	87	89.474	Macaca_mulatta
ENSPVAG00000000261	-	92	89.474	ENSMNEG00000016408	-	87	89.474	Macaca_nemestrina
ENSPVAG00000000261	-	92	89.879	ENSMLEG00000006946	-	87	89.879	Mandrillus_leucophaeus
ENSPVAG00000000261	-	86	57.839	ENSMAMG00000012269	rad54b	84	57.839	Mastacembelus_armatus
ENSPVAG00000000261	-	86	57.810	ENSMZEG00005005281	rad54b	89	57.810	Maylandia_zebra
ENSPVAG00000000261	-	86	73.217	ENSMGAG00000012024	-	81	73.217	Meleagris_gallopavo
ENSPVAG00000000261	-	86	82.075	ENSMAUG00000013586	Rad54b	84	82.075	Mesocricetus_auratus
ENSPVAG00000000261	-	86	88.529	ENSMICG00000000754	-	85	88.529	Microcebus_murinus
ENSPVAG00000000261	-	86	80.485	ENSMOCG00000020035	Rad54b	83	80.485	Microtus_ochrogaster
ENSPVAG00000000261	-	86	57.162	ENSMMOG00000003394	rad54b	84	57.162	Mola_mola
ENSPVAG00000000261	-	86	76.351	ENSMODG00000007343	-	92	76.351	Monodelphis_domestica
ENSPVAG00000000261	-	74	58.915	ENSMALG00000001520	rad54b	99	58.915	Monopterus_albus
ENSPVAG00000000261	-	86	81.781	MGP_CAROLIEiJ_G0025810	Rad54b	83	81.781	Mus_caroli
ENSPVAG00000000261	-	86	82.186	ENSMUSG00000078773	Rad54b	83	82.186	Mus_musculus
ENSPVAG00000000261	-	86	82.321	MGP_PahariEiJ_G0023933	Rad54b	83	82.321	Mus_pahari
ENSPVAG00000000261	-	86	82.726	MGP_SPRETEiJ_G0026758	Rad54b	83	82.726	Mus_spretus
ENSPVAG00000000261	-	86	88.814	ENSMPUG00000008878	-	92	88.814	Mustela_putorius_furo
ENSPVAG00000000261	-	92	90.431	ENSMLUG00000008953	-	88	90.431	Myotis_lucifugus
ENSPVAG00000000261	-	85	84.295	ENSNGAG00000017537	Rad54b	83	84.295	Nannospalax_galili
ENSPVAG00000000261	-	86	58.077	ENSNBRG00000013394	rad54b	86	58.077	Neolamprologus_brichardi
ENSPVAG00000000261	-	92	90.013	ENSNLEG00000003062	-	99	90.069	Nomascus_leucogenys
ENSPVAG00000000261	-	67	74.926	ENSMEUG00000012426	-	64	74.926	Notamacropus_eugenii
ENSPVAG00000000261	-	78	86.283	ENSODEG00000002650	-	91	86.283	Octodon_degus
ENSPVAG00000000261	-	92	84.459	ENSODEG00000019564	-	88	84.459	Octodon_degus
ENSPVAG00000000261	-	86	58.133	ENSONIG00000006067	rad54b	81	58.133	Oreochromis_niloticus
ENSPVAG00000000261	-	86	75.908	ENSOANG00000011348	-	99	75.908	Ornithorhynchus_anatinus
ENSPVAG00000000261	-	86	87.449	ENSOCUG00000016478	-	87	87.449	Oryctolagus_cuniculus
ENSPVAG00000000261	-	86	59.577	ENSORLG00000008918	rad54b	99	62.906	Oryzias_latipes
ENSPVAG00000000261	-	74	62.906	ENSORLG00020012171	rad54b	99	62.906	Oryzias_latipes_hni
ENSPVAG00000000261	-	86	59.921	ENSORLG00015018536	rad54b	79	59.921	Oryzias_latipes_hsok
ENSPVAG00000000261	-	86	59.043	ENSOMEG00000004345	rad54b	96	59.043	Oryzias_melastigma
ENSPVAG00000000261	-	92	87.314	ENSOGAG00000007854	-	87	87.314	Otolemur_garnettii
ENSPVAG00000000261	-	86	88.949	ENSOARG00000007691	-	91	88.949	Ovis_aries
ENSPVAG00000000261	-	92	88.394	ENSPPAG00000029572	-	87	88.394	Pan_paniscus
ENSPVAG00000000261	-	92	90.013	ENSPPRG00000007571	-	99	90.483	Panthera_pardus
ENSPVAG00000000261	-	84	90.483	ENSPTIG00000012670	-	99	90.483	Panthera_tigris_altaica
ENSPVAG00000000261	-	92	90.148	ENSPTRG00000020427	-	99	90.207	Pan_troglodytes
ENSPVAG00000000261	-	92	89.879	ENSPANG00000019566	-	87	89.879	Papio_anubis
ENSPVAG00000000261	-	85	61.425	ENSPKIG00000014974	rad54b	80	61.425	Paramormyrops_kingsleyae
ENSPVAG00000000261	-	86	72.275	ENSPSIG00000002383	-	90	72.275	Pelodiscus_sinensis
ENSPVAG00000000261	-	86	81.536	ENSPEMG00000012133	Rad54b	83	81.536	Peromyscus_maniculatus_bairdii
ENSPVAG00000000261	-	86	57.011	ENSPMAG00000002916	rad54b	94	57.011	Petromyzon_marinus
ENSPVAG00000000261	-	85	78.890	ENSPCIG00000020151	-	86	78.078	Phascolarctos_cinereus
ENSPVAG00000000261	-	86	59.600	ENSPFOG00000023411	rad54b	79	59.600	Poecilia_formosa
ENSPVAG00000000261	-	86	59.600	ENSPLAG00000010430	rad54b	79	59.600	Poecilia_latipinna
ENSPVAG00000000261	-	86	59.600	ENSPMEG00000016873	rad54b	88	59.091	Poecilia_mexicana
ENSPVAG00000000261	-	86	59.546	ENSPREG00000018443	rad54b	85	59.546	Poecilia_reticulata
ENSPVAG00000000261	-	92	89.879	ENSPPYG00000018750	-	87	89.879	Pongo_abelii
ENSPVAG00000000261	-	92	88.799	ENSPCOG00000026845	-	99	88.828	Propithecus_coquereli
ENSPVAG00000000261	-	85	58.221	ENSPNYG00000018303	rad54b	90	58.221	Pundamilia_nyererei
ENSPVAG00000000261	-	86	57.923	ENSPNAG00000000295	rad54b	87	56.933	Pygocentrus_nattereri
ENSPVAG00000000261	-	86	79.515	ENSRNOG00000039949	Rad54b	83	79.515	Rattus_norvegicus
ENSPVAG00000000261	-	92	89.069	ENSRBIG00000020419	-	87	89.069	Rhinopithecus_bieti
ENSPVAG00000000261	-	92	89.069	ENSRROG00000039897	-	87	89.069	Rhinopithecus_roxellana
ENSPVAG00000000261	-	65	42.390	YBR073W	RDH54	61	42.553	Saccharomyces_cerevisiae
ENSPVAG00000000261	-	92	88.529	ENSSBOG00000028501	-	87	88.529	Saimiri_boliviensis_boliviensis
ENSPVAG00000000261	-	86	78.108	ENSSHAG00000017038	-	81	78.108	Sarcophilus_harrisii
ENSPVAG00000000261	-	68	64.116	ENSSFOG00015008483	rad54b	91	64.116	Scleropages_formosus
ENSPVAG00000000261	-	86	56.707	ENSSMAG00000018659	rad54b	86	56.441	Scophthalmus_maximus
ENSPVAG00000000261	-	85	58.412	ENSSDUG00000001122	rad54b	77	58.412	Seriola_dumerili
ENSPVAG00000000261	-	86	58.167	ENSSLDG00000013787	rad54b	86	53.652	Seriola_lalandi_dorsalis
ENSPVAG00000000261	-	86	71.871	ENSSPUG00000016497	-	84	71.871	Sphenodon_punctatus
ENSPVAG00000000261	-	86	57.923	ENSSPAG00000012800	rad54b	85	57.923	Stegastes_partitus
ENSPVAG00000000261	-	92	88.259	ENSSSCG00000006101	-	92	88.259	Sus_scrofa
ENSPVAG00000000261	-	86	72.752	ENSTGUG00000011880	-	81	72.752	Taeniopygia_guttata
ENSPVAG00000000261	-	85	57.852	ENSTRUG00000010015	rad54b	78	57.852	Takifugu_rubripes
ENSPVAG00000000261	-	92	85.425	ENSTTRG00000006312	-	88	85.425	Tursiops_truncatus
ENSPVAG00000000261	-	92	90.553	ENSUMAG00000016401	-	87	90.553	Ursus_maritimus
ENSPVAG00000000261	-	92	89.204	ENSVPAG00000003157	-	88	89.204	Vicugna_pacos
ENSPVAG00000000261	-	86	57.923	ENSXETG00000025924	rad54b	93	57.923	Xenopus_tropicalis
ENSPVAG00000000261	-	86	58.090	ENSXMAG00000013141	rad54b	86	57.937	Xiphophorus_maculatus