EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000000297 (Gene tree)
Gene ID: -
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 8883 bases
Position: chrscaffold_9135:5907-14789
Accession: 7667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000000272	RRM_1	PF00076.22	2.9e-58	1	4
ENSPVAP00000000272	RRM_1	PF00076.22	2.9e-58	2	4
ENSPVAP00000000272	RRM_1	PF00076.22	2.9e-58	3	4
ENSPVAP00000000272	RRM_1	PF00076.22	2.9e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000000296	NCL-201	2136	-	ENSPVAP00000000272	711 (aa)	-	UPI00018B1534

Gene Model

Click here to download ENSPVAG00000000297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000000297's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000000297	NCL	61	92.063	ENSG00000115053	NCL	100	90.541	Homo_sapiens
ENSPVAG00000000297	NCL	62	98.633	ENSAMEG00000016289	NCL	92	88.956	Ailuropoda_melanoleuca
ENSPVAG00000000297	NCL	99	71.469	ENSANAG00000024378	-	85	80.741	Aotus_nancymaae
ENSPVAG00000000297	NCL	53	97.361	ENSANAG00000035814	-	100	90.237	Aotus_nancymaae
ENSPVAG00000000297	NCL	77	92.642	ENSBTAG00000026909	-	95	92.642	Bos_taurus
ENSPVAG00000000297	NCL	94	85.465	ENSBTAG00000016174	NCL	92	87.874	Bos_taurus
ENSPVAG00000000297	NCL	92	90.574	ENSBTAG00000050728	-	89	90.574	Bos_taurus
ENSPVAG00000000297	NCL	53	97.361	ENSCJAG00000013538	NCL	100	88.072	Callithrix_jacchus
ENSPVAG00000000297	NCL	100	90.264	ENSCAFG00000011037	NCL	92	89.985	Canis_familiaris
ENSPVAG00000000297	NCL	84	89.439	ENSCAFG00020023145	NCL	89	89.769	Canis_lupus_dingo
ENSPVAG00000000297	NCL	92	96.903	ENSCHIG00000021052	-	94	96.516	Capra_hircus
ENSPVAG00000000297	NCL	85	87.317	ENSCHIG00000010894	-	100	89.185	Capra_hircus
ENSPVAG00000000297	NCL	92	64.670	ENSCHIG00000012143	-	92	74.316	Capra_hircus
ENSPVAG00000000297	NCL	92	80.967	ENSCHIG00000026149	-	93	81.269	Capra_hircus
ENSPVAG00000000297	NCL	90	70.827	ENSTSYG00000036886	-	85	82.500	Carlito_syrichta
ENSPVAG00000000297	NCL	92	88.619	ENSTSYG00000004355	-	92	88.619	Carlito_syrichta
ENSPVAG00000000297	NCL	95	86.379	ENSTSYG00000029779	-	98	85.812	Carlito_syrichta
ENSPVAG00000000297	NCL	62	90.205	ENSCAPG00000009405	NCL	91	79.908	Cavia_aperea
ENSPVAG00000000297	NCL	92	82.192	ENSCPOG00000001034	NCL	92	83.435	Cavia_porcellus
ENSPVAG00000000297	NCL	53	97.361	ENSCCAG00000021040	-	100	88.827	Cebus_capucinus
ENSPVAG00000000297	NCL	56	88.442	ENSCCAG00000000551	-	76	88.557	Cebus_capucinus
ENSPVAG00000000297	NCL	100	88.547	ENSCATG00000037033	NCL	92	88.567	Cercocebus_atys
ENSPVAG00000000297	NCL	100	83.333	ENSCLAG00000013080	NCL	92	83.030	Chinchilla_lanigera
ENSPVAG00000000297	NCL	62	97.955	ENSCSAG00000006660	NCL	95	97.955	Chlorocebus_sabaeus
ENSPVAG00000000297	NCL	61	78.522	ENSCHOG00000012860	NCL	88	77.931	Choloepus_hoffmanni
ENSPVAG00000000297	NCL	58	100.000	ENSCANG00000036756	NCL	94	100.000	Colobus_angolensis_palliatus
ENSPVAG00000000297	NCL	92	81.527	ENSCGRG00001024315	-	91	81.679	Cricetulus_griseus_chok1gshd
ENSPVAG00000000297	NCL	92	68.278	ENSCGRG00001022350	-	95	68.237	Cricetulus_griseus_chok1gshd
ENSPVAG00000000297	NCL	85	79.612	ENSCGRG00000017894	-	88	80.032	Cricetulus_griseus_crigri
ENSPVAG00000000297	NCL	92	68.024	ENSCGRG00000000507	-	93	66.819	Cricetulus_griseus_crigri
ENSPVAG00000000297	NCL	100	84.189	ENSDNOG00000010783	-	92	86.384	Dasypus_novemcinctus
ENSPVAG00000000297	NCL	100	76.643	ENSDNOG00000046347	-	99	76.084	Dasypus_novemcinctus
ENSPVAG00000000297	NCL	92	76.840	ENSDORG00000012513	-	91	77.710	Dipodomys_ordii
ENSPVAG00000000297	NCL	51	74.044	ENSDORG00000023596	-	92	70.062	Dipodomys_ordii
ENSPVAG00000000297	NCL	53	91.842	ENSETEG00000018937	-	85	80.914	Echinops_telfairi
ENSPVAG00000000297	NCL	62	61.036	ENSETEG00000008553	-	88	61.785	Echinops_telfairi
ENSPVAG00000000297	NCL	81	67.368	ENSETEG00000008139	-	94	67.568	Echinops_telfairi
ENSPVAG00000000297	NCL	53	91.247	ENSETEG00000014756	-	86	91.293	Echinops_telfairi
ENSPVAG00000000297	NCL	98	89.250	ENSEASG00005008488	NCL	91	87.635	Equus_asinus_asinus
ENSPVAG00000000297	NCL	100	89.350	ENSECAG00000021868	NCL	92	88.235	Equus_caballus
ENSPVAG00000000297	NCL	53	91.029	ENSEEUG00000005913	NCL	85	81.518	Erinaceus_europaeus
ENSPVAG00000000297	NCL	100	89.722	ENSFCAG00000027622	NCL	92	89.394	Felis_catus
ENSPVAG00000000297	NCL	91	84.380	ENSFDAG00000014291	NCL	92	84.074	Fukomys_damarensis
ENSPVAG00000000297	NCL	92	87.823	ENSGGOG00000004300	NCL	100	88.982	Gorilla_gorilla
ENSPVAG00000000297	NCL	53	94.987	ENSHGLG00000002031	-	100	86.351	Heterocephalus_glaber_female
ENSPVAG00000000297	NCL	50	83.636	ENSHGLG00000005133	-	100	74.476	Heterocephalus_glaber_female
ENSPVAG00000000297	NCL	53	86.702	ENSHGLG00000011069	-	92	75.307	Heterocephalus_glaber_female
ENSPVAG00000000297	NCL	53	94.723	ENSHGLG00100014537	-	100	86.154	Heterocephalus_glaber_male
ENSPVAG00000000297	NCL	73	85.600	ENSHGLG00100000745	-	82	85.676	Heterocephalus_glaber_male
ENSPVAG00000000297	NCL	55	82.864	ENSJJAG00000016165	Ncl	93	78.571	Jaculus_jaculus
ENSPVAG00000000297	NCL	91	74.501	ENSLAFG00000013061	NCL	91	73.813	Loxodonta_africana
ENSPVAG00000000297	NCL	100	88.563	ENSMFAG00000040385	NCL	92	88.737	Macaca_fascicularis
ENSPVAG00000000297	NCL	100	88.563	ENSMMUG00000018094	NCL	92	88.737	Macaca_mulatta
ENSPVAG00000000297	NCL	61	92.063	ENSMNEG00000023839	NCL	73	94.012	Macaca_nemestrina
ENSPVAG00000000297	NCL	100	88.687	ENSMLEG00000028935	NCL	92	88.720	Mandrillus_leucophaeus
ENSPVAG00000000297	NCL	100	89.106	ENSMICG00000002538	-	92	88.262	Microcebus_murinus
ENSPVAG00000000297	NCL	92	71.626	ENSMICG00000029975	-	86	79.216	Microcebus_murinus
ENSPVAG00000000297	NCL	92	78.626	MGP_CAROLIEiJ_G0014362	Ncl	92	80.000	Mus_caroli
ENSPVAG00000000297	NCL	92	78.626	ENSMUSG00000026234	Ncl	92	80.000	Mus_musculus
ENSPVAG00000000297	NCL	92	79.756	MGP_PahariEiJ_G0027599	Ncl	92	81.279	Mus_pahari
ENSPVAG00000000297	NCL	92	79.116	MGP_SPRETEiJ_G0015164	Ncl	92	80.335	Mus_spretus
ENSPVAG00000000297	NCL	92	89.666	ENSMLUG00000014547	NCL	92	90.274	Myotis_lucifugus
ENSPVAG00000000297	NCL	92	60.458	ENSNGAG00000006188	-	54	72.823	Nannospalax_galili
ENSPVAG00000000297	NCL	92	80.902	ENSNGAG00000002454	-	91	81.420	Nannospalax_galili
ENSPVAG00000000297	NCL	85	76.503	ENSNLEG00000014107	-	95	77.737	Nomascus_leucogenys
ENSPVAG00000000297	NCL	92	85.593	ENSODEG00000002441	-	92	85.593	Octodon_degus
ENSPVAG00000000297	NCL	53	90.981	ENSODEG00000003281	-	91	80.611	Octodon_degus
ENSPVAG00000000297	NCL	70	71.111	ENSODEG00000007803	-	100	63.685	Octodon_degus
ENSPVAG00000000297	NCL	92	79.109	ENSOCUG00000004312	NCL	100	80.169	Oryctolagus_cuniculus
ENSPVAG00000000297	NCL	85	77.138	ENSOARG00000013710	-	94	80.460	Ovis_aries
ENSPVAG00000000297	NCL	91	83.409	ENSOARG00000020709	-	92	84.018	Ovis_aries
ENSPVAG00000000297	NCL	62	78.475	ENSOARG00000004072	-	92	70.559	Ovis_aries
ENSPVAG00000000297	NCL	88	87.629	ENSOARG00000013270	-	100	92.308	Ovis_aries
ENSPVAG00000000297	NCL	61	93.197	ENSPPAG00000011619	NCL	92	89.346	Pan_paniscus
ENSPVAG00000000297	NCL	100	89.986	ENSPPRG00000012603	NCL	92	89.074	Panthera_pardus
ENSPVAG00000000297	NCL	99	89.902	ENSPTIG00000010393	NCL	91	88.974	Panthera_tigris_altaica
ENSPVAG00000000297	NCL	100	88.301	ENSPTRG00000013025	NCL	92	88.450	Pan_troglodytes
ENSPVAG00000000297	NCL	100	88.563	ENSPANG00000010292	NCL	92	88.737	Papio_anubis
ENSPVAG00000000297	NCL	70	84.356	ENSPPYG00000013265	NCL	92	81.900	Pongo_abelii
ENSPVAG00000000297	NCL	91	83.077	ENSPCOG00000004160	-	94	83.308	Propithecus_coquereli
ENSPVAG00000000297	NCL	92	89.058	ENSPCOG00000003051	-	91	90.122	Propithecus_coquereli
ENSPVAG00000000297	NCL	92	79.394	ENSRNOG00000018273	Ncl	92	80.758	Rattus_norvegicus
ENSPVAG00000000297	NCL	92	84.146	ENSRBIG00000037525	-	91	84.604	Rhinopithecus_bieti
ENSPVAG00000000297	NCL	67	97.232	ENSRBIG00000035396	-	90	95.302	Rhinopithecus_bieti
ENSPVAG00000000297	NCL	99	83.419	ENSRROG00000036103	-	99	85.645	Rhinopithecus_roxellana
ENSPVAG00000000297	NCL	92	87.671	ENSRROG00000028756	-	91	98.577	Rhinopithecus_roxellana
ENSPVAG00000000297	NCL	53	97.098	ENSSBOG00000029193	-	92	87.727	Saimiri_boliviensis_boliviensis
ENSPVAG00000000297	NCL	74	89.522	ENSSBOG00000027549	-	100	82.937	Saimiri_boliviensis_boliviensis
ENSPVAG00000000297	NCL	69	74.429	ENSSBOG00000023094	-	88	74.661	Saimiri_boliviensis_boliviensis
ENSPVAG00000000297	NCL	92	88.024	ENSSSCG00000016275	NCL	92	88.623	Sus_scrofa
ENSPVAG00000000297	NCL	74	76.829	ENSTBEG00000002469	-	66	81.714	Tupaia_belangeri
ENSPVAG00000000297	NCL	55	84.960	ENSTBEG00000001546	-	85	80.952	Tupaia_belangeri
ENSPVAG00000000297	NCL	92	89.160	ENSTTRG00000009094	NCL	91	88.092	Tursiops_truncatus
ENSPVAG00000000297	NCL	53	98.417	ENSUAMG00000005639	NCL	100	95.030	Ursus_americanus
ENSPVAG00000000297	NCL	62	98.633	ENSUMAG00000015789	NCL	92	90.244	Ursus_maritimus
ENSPVAG00000000297	NCL	69	89.583	ENSVPAG00000001796	NCL	69	89.583	Vicugna_pacos
ENSPVAG00000000297	NCL	100	89.045	ENSVVUG00000025564	NCL	100	88.624	Vulpes_vulpes