EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000000519 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 1740 bases
Position: chrGeneScaffold_3365:160557-162296
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000000487	RRM_1	PF00076.22	1.9e-26	1	2
ENSPVAP00000000487	RRM_1	PF00076.22	1.9e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000000518	-	747	-	ENSPVAP00000000487	248 (aa)	-	UPI00018B2E7D

Gene Model

Click here to download ENSPVAG00000000519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000000519's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000000519	-	52	84.615	ENSPVAG00000002229	SRSF9	58	84.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000000519	-	75	100.000	ENSG00000136450	SRSF1	100	100.000	Homo_sapiens
ENSPVAG00000000519	-	54	98.571	ENSAPOG00000008542	-	57	98.571	Acanthochromis_polyacanthus
ENSPVAG00000000519	-	53	97.143	ENSAPOG00000002748	-	53	97.143	Acanthochromis_polyacanthus
ENSPVAG00000000519	-	75	100.000	ENSAMEG00000002635	SRSF1	77	100.000	Ailuropoda_melanoleuca
ENSPVAG00000000519	-	53	97.143	ENSACIG00000008091	srsf1a	57	97.143	Amphilophus_citrinellus
ENSPVAG00000000519	-	54	98.571	ENSAOCG00000000337	-	54	98.571	Amphiprion_ocellaris
ENSPVAG00000000519	-	53	97.143	ENSAOCG00000010671	-	57	97.143	Amphiprion_ocellaris
ENSPVAG00000000519	-	53	97.143	ENSAPEG00000009915	-	57	97.143	Amphiprion_percula
ENSPVAG00000000519	-	54	98.571	ENSAPEG00000023352	-	54	98.571	Amphiprion_percula
ENSPVAG00000000519	-	54	97.143	ENSATEG00000021567	-	56	97.143	Anabas_testudineus
ENSPVAG00000000519	-	53	97.143	ENSATEG00000022403	-	53	97.143	Anabas_testudineus
ENSPVAG00000000519	-	75	99.174	ENSACAG00000005542	-	75	99.174	Anolis_carolinensis
ENSPVAG00000000519	-	65	92.157	ENSANAG00000025417	-	75	92.157	Aotus_nancymaae
ENSPVAG00000000519	-	74	100.000	ENSANAG00000020583	-	89	100.000	Aotus_nancymaae
ENSPVAG00000000519	-	69	96.774	ENSAMXG00000035996	srsf1a	52	97.143	Astyanax_mexicanus
ENSPVAG00000000519	-	75	100.000	ENSBTAG00000014766	SRSF1	75	100.000	Bos_taurus
ENSPVAG00000000519	-	74	100.000	ENSCJAG00000041713	-	89	100.000	Callithrix_jacchus
ENSPVAG00000000519	-	54	94.286	ENSCJAG00000008111	-	60	94.286	Callithrix_jacchus
ENSPVAG00000000519	-	74	100.000	ENSCAFG00000017430	SRSF1	73	100.000	Canis_familiaris
ENSPVAG00000000519	-	74	100.000	ENSCAFG00020025632	-	73	100.000	Canis_lupus_dingo
ENSPVAG00000000519	-	75	100.000	ENSCHIG00000010787	SRSF1	75	100.000	Capra_hircus
ENSPVAG00000000519	-	74	100.000	ENSTSYG00000013899	-	89	100.000	Carlito_syrichta
ENSPVAG00000000519	-	75	100.000	ENSCPOG00000032681	-	75	100.000	Cavia_porcellus
ENSPVAG00000000519	-	75	100.000	ENSCCAG00000029484	-	89	100.000	Cebus_capucinus
ENSPVAG00000000519	-	74	100.000	ENSCATG00000042294	-	89	100.000	Cercocebus_atys
ENSPVAG00000000519	-	75	100.000	ENSCLAG00000014707	-	75	100.000	Chinchilla_lanigera
ENSPVAG00000000519	-	74	100.000	ENSCSAG00000005642	-	73	100.000	Chlorocebus_sabaeus
ENSPVAG00000000519	-	75	100.000	ENSCHOG00000001899	SRSF1	75	100.000	Choloepus_hoffmanni
ENSPVAG00000000519	-	75	100.000	ENSCPBG00000009851	-	75	100.000	Chrysemys_picta_bellii
ENSPVAG00000000519	-	74	100.000	ENSCANG00000029726	-	89	100.000	Colobus_angolensis_palliatus
ENSPVAG00000000519	-	74	100.000	ENSCGRG00001000670	Srsf1	73	100.000	Cricetulus_griseus_chok1gshd
ENSPVAG00000000519	-	75	100.000	ENSCGRG00000005590	Srsf1	75	100.000	Cricetulus_griseus_crigri
ENSPVAG00000000519	-	53	95.714	ENSCSEG00000014272	-	57	95.714	Cynoglossus_semilaevis
ENSPVAG00000000519	-	54	94.203	ENSCSEG00000009973	-	51	94.203	Cynoglossus_semilaevis
ENSPVAG00000000519	-	53	95.652	ENSCVAG00000005458	-	59	96.491	Cyprinodon_variegatus
ENSPVAG00000000519	-	53	97.143	ENSCVAG00000018617	-	53	97.143	Cyprinodon_variegatus
ENSPVAG00000000519	-	74	96.774	ENSDARG00000057691	srsf1a	71	96.774	Danio_rerio
ENSPVAG00000000519	-	74	98.387	ENSDARG00000017843	srsf1b	74	98.387	Danio_rerio
ENSPVAG00000000519	-	74	100.000	ENSDNOG00000011737	-	73	100.000	Dasypus_novemcinctus
ENSPVAG00000000519	-	75	100.000	ENSDORG00000015082	Srsf1	75	100.000	Dipodomys_ordii
ENSPVAG00000000519	-	74	100.000	ENSEASG00005002922	-	73	100.000	Equus_asinus_asinus
ENSPVAG00000000519	-	75	100.000	ENSECAG00000016654	SRSF1	75	100.000	Equus_caballus
ENSPVAG00000000519	-	53	95.714	ENSELUG00000021646	srsf1a	53	95.714	Esox_lucius
ENSPVAG00000000519	-	74	100.000	ENSFCAG00000002250	-	73	100.000	Felis_catus
ENSPVAG00000000519	-	99	71.545	ENSFALG00000005062	-	97	71.545	Ficedula_albicollis
ENSPVAG00000000519	-	75	100.000	ENSFDAG00000010646	-	75	100.000	Fukomys_damarensis
ENSPVAG00000000519	-	53	97.143	ENSFHEG00000003174	srsf1a	57	97.143	Fundulus_heteroclitus
ENSPVAG00000000519	-	67	93.443	ENSGMOG00000014787	-	57	97.143	Gadus_morhua
ENSPVAG00000000519	-	75	100.000	ENSGALG00000005525	SRSF1	75	100.000	Gallus_gallus
ENSPVAG00000000519	-	54	94.286	ENSGACG00000020621	srsf1b	57	94.286	Gasterosteus_aculeatus
ENSPVAG00000000519	-	74	100.000	ENSGAGG00000022965	-	73	100.000	Gopherus_agassizii
ENSPVAG00000000519	-	74	100.000	ENSGGOG00000004386	SRSF1	89	100.000	Gorilla_gorilla
ENSPVAG00000000519	-	54	97.143	ENSHBUG00000016788	srsf1a	55	97.143	Haplochromis_burtoni
ENSPVAG00000000519	-	62	100.000	ENSHGLG00000000600	-	71	100.000	Heterocephalus_glaber_female
ENSPVAG00000000519	-	62	100.000	ENSHGLG00000000669	-	71	100.000	Heterocephalus_glaber_female
ENSPVAG00000000519	-	75	100.000	ENSHGLG00100016906	-	75	100.000	Heterocephalus_glaber_male
ENSPVAG00000000519	-	53	94.286	ENSHCOG00000018918	srsf1a	51	94.286	Hippocampus_comes
ENSPVAG00000000519	-	69	96.721	ENSIPUG00000017039	srsf1a	52	98.571	Ictalurus_punctatus
ENSPVAG00000000519	-	75	97.521	ENSIPUG00000008750	srsf1b	75	97.521	Ictalurus_punctatus
ENSPVAG00000000519	-	75	100.000	ENSSTOG00000000243	-	75	100.000	Ictidomys_tridecemlineatus
ENSPVAG00000000519	-	75	100.000	ENSJJAG00000000102	-	75	100.000	Jaculus_jaculus
ENSPVAG00000000519	-	53	97.143	ENSKMAG00000019232	srsf1a	53	97.143	Kryptolebias_marmoratus
ENSPVAG00000000519	-	53	95.714	ENSLBEG00000020864	-	57	95.714	Labrus_bergylta
ENSPVAG00000000519	-	54	94.286	ENSLBEG00000015294	-	54	94.286	Labrus_bergylta
ENSPVAG00000000519	-	74	100.000	ENSLACG00000014160	srsf1a	69	100.000	Latimeria_chalumnae
ENSPVAG00000000519	-	75	100.000	ENSLOCG00000005994	srsf1a	75	100.000	Lepisosteus_oculatus
ENSPVAG00000000519	-	75	100.000	ENSLAFG00000025743	SRSF1	80	100.000	Loxodonta_africana
ENSPVAG00000000519	-	75	100.000	ENSMFAG00000040003	-	89	100.000	Macaca_fascicularis
ENSPVAG00000000519	-	74	98.462	ENSMMUG00000003260	-	73	98.462	Macaca_mulatta
ENSPVAG00000000519	-	74	100.000	ENSMMUG00000004725	SRSF1	89	100.000	Macaca_mulatta
ENSPVAG00000000519	-	74	98.319	ENSMNEG00000015983	-	73	98.319	Macaca_nemestrina
ENSPVAG00000000519	-	74	100.000	ENSMNEG00000027680	-	89	100.000	Macaca_nemestrina
ENSPVAG00000000519	-	74	97.479	ENSMLEG00000015243	-	74	97.479	Mandrillus_leucophaeus
ENSPVAG00000000519	-	75	100.000	ENSMLEG00000040509	SRSF1	75	100.000	Mandrillus_leucophaeus
ENSPVAG00000000519	-	54	98.571	ENSMAMG00000019687	-	56	98.571	Mastacembelus_armatus
ENSPVAG00000000519	-	53	97.143	ENSMAMG00000018454	-	53	97.143	Mastacembelus_armatus
ENSPVAG00000000519	-	54	98.571	ENSMAMG00000019691	-	56	98.571	Mastacembelus_armatus
ENSPVAG00000000519	-	75	100.000	ENSMAUG00000021845	Srsf1	75	100.000	Mesocricetus_auratus
ENSPVAG00000000519	-	74	100.000	ENSMICG00000013639	-	89	100.000	Microcebus_murinus
ENSPVAG00000000519	-	75	100.000	ENSMOCG00000001996	Srsf1	75	100.000	Microtus_ochrogaster
ENSPVAG00000000519	-	53	95.714	ENSMMOG00000014354	srsf1a	57	95.714	Mola_mola
ENSPVAG00000000519	-	54	98.571	ENSMALG00000007763	-	63	97.143	Monopterus_albus
ENSPVAG00000000519	-	58	97.590	ENSMALG00000017129	-	56	97.590	Monopterus_albus
ENSPVAG00000000519	-	75	100.000	MGP_CAROLIEiJ_G0016943	Srsf1	75	100.000	Mus_caroli
ENSPVAG00000000519	-	75	100.000	ENSMUSG00000018379	Srsf1	75	100.000	Mus_musculus
ENSPVAG00000000519	-	75	100.000	MGP_PahariEiJ_G0018074	Srsf1	75	100.000	Mus_pahari
ENSPVAG00000000519	-	75	100.000	MGP_SPRETEiJ_G0017790	Srsf1	75	100.000	Mus_spretus
ENSPVAG00000000519	-	75	100.000	ENSMPUG00000015369	SRSF1	75	100.000	Mustela_putorius_furo
ENSPVAG00000000519	-	75	100.000	ENSMLUG00000011040	SRSF1	75	100.000	Myotis_lucifugus
ENSPVAG00000000519	-	75	97.521	ENSMLUG00000023995	-	77	97.521	Myotis_lucifugus
ENSPVAG00000000519	-	75	100.000	ENSNGAG00000011395	Srsf1	75	100.000	Nannospalax_galili
ENSPVAG00000000519	-	75	92.308	ENSNBRG00000008041	srsf1b	58	92.308	Neolamprologus_brichardi
ENSPVAG00000000519	-	74	100.000	ENSNLEG00000008088	-	89	100.000	Nomascus_leucogenys
ENSPVAG00000000519	-	75	100.000	ENSODEG00000011481	-	75	100.000	Octodon_degus
ENSPVAG00000000519	-	53	97.143	ENSONIG00000013160	-	53	97.143	Oreochromis_niloticus
ENSPVAG00000000519	-	71	95.385	ENSONIG00000004860	-	56	97.143	Oreochromis_niloticus
ENSPVAG00000000519	-	75	73.600	ENSOCUG00000010894	-	54	85.294	Oryctolagus_cuniculus
ENSPVAG00000000519	-	53	97.143	ENSORLG00000004580	srsf1a	53	97.143	Oryzias_latipes
ENSPVAG00000000519	-	53	97.143	ENSORLG00020009456	srsf1a	57	97.143	Oryzias_latipes_hni
ENSPVAG00000000519	-	53	97.143	ENSORLG00015014384	srsf1a	57	97.143	Oryzias_latipes_hsok
ENSPVAG00000000519	-	75	100.000	ENSOGAG00000025950	-	75	100.000	Otolemur_garnettii
ENSPVAG00000000519	-	75	100.000	ENSOARG00000008323	SRSF1	78	100.000	Ovis_aries
ENSPVAG00000000519	-	75	100.000	ENSPPAG00000043403	-	89	100.000	Pan_paniscus
ENSPVAG00000000519	-	75	100.000	ENSPPRG00000004238	-	75	100.000	Panthera_pardus
ENSPVAG00000000519	-	74	100.000	ENSPTRG00000049077	SRSF1	89	100.000	Pan_troglodytes
ENSPVAG00000000519	-	74	100.000	ENSPANG00000022305	-	89	100.000	Papio_anubis
ENSPVAG00000000519	-	69	97.479	ENSPANG00000030275	-	78	97.479	Papio_anubis
ENSPVAG00000000519	-	75	98.462	ENSPKIG00000012857	srsf1b	75	98.462	Paramormyrops_kingsleyae
ENSPVAG00000000519	-	73	98.361	ENSPKIG00000007204	srsf1a	74	98.361	Paramormyrops_kingsleyae
ENSPVAG00000000519	-	68	100.000	ENSPSIG00000009000	-	68	100.000	Pelodiscus_sinensis
ENSPVAG00000000519	-	71	92.857	ENSPMGG00000005467	-	56	97.143	Periophthalmus_magnuspinnatus
ENSPVAG00000000519	-	53	97.143	ENSPMGG00000013112	-	59	97.143	Periophthalmus_magnuspinnatus
ENSPVAG00000000519	-	75	100.000	ENSPEMG00000021416	Srsf1	75	100.000	Peromyscus_maniculatus_bairdii
ENSPVAG00000000519	-	75	100.000	ENSPCIG00000006076	-	75	100.000	Phascolarctos_cinereus
ENSPVAG00000000519	-	54	94.521	ENSPLAG00000008416	srsf1b	53	95.652	Poecilia_latipinna
ENSPVAG00000000519	-	54	94.521	ENSPMEG00000002388	-	53	95.652	Poecilia_mexicana
ENSPVAG00000000519	-	53	97.143	ENSPREG00000009667	srsf1a	53	97.143	Poecilia_reticulata
ENSPVAG00000000519	-	75	100.000	ENSPPYG00000008240	SRSF1	75	100.000	Pongo_abelii
ENSPVAG00000000519	-	75	100.000	ENSPCAG00000005199	SRSF1	75	100.000	Procavia_capensis
ENSPVAG00000000519	-	55	90.278	ENSPCOG00000025736	-	67	89.855	Propithecus_coquereli
ENSPVAG00000000519	-	75	100.000	ENSPCOG00000023654	-	89	100.000	Propithecus_coquereli
ENSPVAG00000000519	-	75	98.462	ENSPNAG00000014601	srsf1b	76	98.462	Pygocentrus_nattereri
ENSPVAG00000000519	-	69	96.774	ENSPNAG00000022241	srsf1a	54	97.143	Pygocentrus_nattereri
ENSPVAG00000000519	-	75	100.000	ENSRNOG00000050323	Srsf1	75	100.000	Rattus_norvegicus
ENSPVAG00000000519	-	74	100.000	ENSRBIG00000034445	-	89	100.000	Rhinopithecus_bieti
ENSPVAG00000000519	-	75	100.000	ENSRROG00000041506	-	89	100.000	Rhinopithecus_roxellana
ENSPVAG00000000519	-	75	100.000	ENSSBOG00000025377	-	89	100.000	Saimiri_boliviensis_boliviensis
ENSPVAG00000000519	-	75	100.000	ENSSHAG00000002552	-	75	100.000	Sarcophilus_harrisii
ENSPVAG00000000519	-	75	98.438	ENSSFOG00015004800	srsf1a	75	98.438	Scleropages_formosus
ENSPVAG00000000519	-	53	95.714	ENSSMAG00000007018	-	53	95.714	Scophthalmus_maximus
ENSPVAG00000000519	-	69	92.453	ENSSMAG00000009719	-	53	94.286	Scophthalmus_maximus
ENSPVAG00000000519	-	75	89.231	ENSSDUG00000003929	-	60	89.231	Seriola_dumerili
ENSPVAG00000000519	-	53	95.714	ENSSDUG00000011303	-	57	95.714	Seriola_dumerili
ENSPVAG00000000519	-	53	95.714	ENSSLDG00000010543	-	53	95.714	Seriola_lalandi_dorsalis
ENSPVAG00000000519	-	54	95.775	ENSSLDG00000016868	-	59	95.775	Seriola_lalandi_dorsalis
ENSPVAG00000000519	-	67	86.154	ENSSLDG00000016895	-	51	92.982	Seriola_lalandi_dorsalis
ENSPVAG00000000519	-	74	100.000	ENSSPUG00000000804	-	73	100.000	Sphenodon_punctatus
ENSPVAG00000000519	-	54	98.571	ENSSPAG00000014152	-	52	98.571	Stegastes_partitus
ENSPVAG00000000519	-	53	97.143	ENSSPAG00000022562	-	53	97.143	Stegastes_partitus
ENSPVAG00000000519	-	75	100.000	ENSSSCG00000017626	-	75	100.000	Sus_scrofa
ENSPVAG00000000519	-	53	95.714	ENSTRUG00000003691	srsf1a	53	95.714	Takifugu_rubripes
ENSPVAG00000000519	-	53	95.714	ENSTNIG00000016223	srsf1a	53	95.714	Tetraodon_nigroviridis
ENSPVAG00000000519	-	75	100.000	ENSUAMG00000009858	SRSF1	75	100.000	Ursus_americanus
ENSPVAG00000000519	-	74	100.000	ENSUMAG00000000455	-	73	100.000	Ursus_maritimus
ENSPVAG00000000519	-	75	100.000	ENSVPAG00000010094	SRSF1	75	100.000	Vicugna_pacos
ENSPVAG00000000519	-	74	100.000	ENSVVUG00000011882	-	73	100.000	Vulpes_vulpes
ENSPVAG00000000519	-	75	100.000	ENSXETG00000008954	srsf1	70	100.000	Xenopus_tropicalis
ENSPVAG00000000519	-	53	97.143	ENSXMAG00000011766	srsf1a	53	97.143	Xiphophorus_maculatus