EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000000684 (Gene tree)
Gene ID: -
Gene Symbol: SF3B3
Alias: KIAA0017|RSE1|SAP130|SF3b130
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 35113 bases
Position: chrGeneScaffold_2424:208035-243147
Accession: 10770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000000647	CPSF_A	PF03178.15	3.6e-100	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000000684	SF3B3-201	3651	-	ENSPVAP00000000647	1216 (aa)	-	UPI00018B362C

Gene Model

Click here to download ENSPVAG00000000684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000000684's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000000684	SF3B3	100	99.836	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSPVAG00000000684	SF3B3	96	93.510	ENSAPOG00000006172	sf3b3	98	93.510	Acanthochromis_polyacanthus
ENSPVAG00000000684	SF3B3	100	99.672	ENSAMEG00000002187	SF3B3	100	99.672	Ailuropoda_melanoleuca
ENSPVAG00000000684	SF3B3	92	90.625	ENSACIG00000016487	sf3b3	100	90.625	Amphilophus_citrinellus
ENSPVAG00000000684	SF3B3	100	93.426	ENSAOCG00000007158	sf3b3	100	93.426	Amphiprion_ocellaris
ENSPVAG00000000684	SF3B3	100	93.426	ENSAPEG00000022786	sf3b3	100	93.426	Amphiprion_percula
ENSPVAG00000000684	SF3B3	100	93.509	ENSATEG00000013708	sf3b3	100	93.509	Anabas_testudineus
ENSPVAG00000000684	SF3B3	81	98.075	ENSAPLG00000004996	SF3B3	100	98.075	Anas_platyrhynchos
ENSPVAG00000000684	SF3B3	100	98.603	ENSACAG00000001817	SF3B3	100	98.603	Anolis_carolinensis
ENSPVAG00000000684	SF3B3	100	99.836	ENSANAG00000028001	SF3B3	100	99.836	Aotus_nancymaae
ENSPVAG00000000684	SF3B3	96	93.168	ENSACLG00000022555	sf3b3	98	93.168	Astatotilapia_calliptera
ENSPVAG00000000684	SF3B3	100	93.180	ENSAMXG00000003410	sf3b3	100	93.180	Astyanax_mexicanus
ENSPVAG00000000684	SF3B3	100	99.836	ENSBTAG00000010627	SF3B3	100	99.836	Bos_taurus
ENSPVAG00000000684	SF3B3	100	60.618	WBGene00019323	teg-4	100	60.618	Caenorhabditis_elegans
ENSPVAG00000000684	SF3B3	100	99.836	ENSCJAG00000014773	SF3B3	99	99.836	Callithrix_jacchus
ENSPVAG00000000684	SF3B3	100	99.918	ENSCAFG00000020151	SF3B3	100	99.918	Canis_familiaris
ENSPVAG00000000684	SF3B3	100	99.918	ENSCAFG00020020912	SF3B3	100	99.918	Canis_lupus_dingo
ENSPVAG00000000684	SF3B3	100	99.918	ENSCHIG00000019822	SF3B3	100	99.918	Capra_hircus
ENSPVAG00000000684	SF3B3	100	99.836	ENSTSYG00000007910	SF3B3	100	99.836	Carlito_syrichta
ENSPVAG00000000684	SF3B3	84	88.787	ENSCAPG00000001484	SF3B3	92	88.787	Cavia_aperea
ENSPVAG00000000684	SF3B3	100	98.521	ENSCPOG00000000586	SF3B3	100	98.521	Cavia_porcellus
ENSPVAG00000000684	SF3B3	100	99.836	ENSCCAG00000017736	SF3B3	100	99.836	Cebus_capucinus
ENSPVAG00000000684	SF3B3	100	99.836	ENSCATG00000036562	SF3B3	100	99.836	Cercocebus_atys
ENSPVAG00000000684	SF3B3	100	99.836	ENSCLAG00000003921	SF3B3	100	99.836	Chinchilla_lanigera
ENSPVAG00000000684	SF3B3	100	99.753	ENSCSAG00000004371	SF3B3	100	99.753	Chlorocebus_sabaeus
ENSPVAG00000000684	SF3B3	90	92.835	ENSCHOG00000001878	SF3B3	90	92.835	Choloepus_hoffmanni
ENSPVAG00000000684	SF3B3	100	98.850	ENSCPBG00000015853	SF3B3	100	98.850	Chrysemys_picta_bellii
ENSPVAG00000000684	SF3B3	100	80.788	ENSCING00000001342	-	100	80.788	Ciona_intestinalis
ENSPVAG00000000684	SF3B3	99	79.310	ENSCSAVG00000011454	-	100	79.310	Ciona_savignyi
ENSPVAG00000000684	SF3B3	100	96.546	ENSCANG00000042920	SF3B3	100	96.546	Colobus_angolensis_palliatus
ENSPVAG00000000684	SF3B3	100	99.753	ENSCGRG00001015908	Sf3b3	100	99.753	Cricetulus_griseus_chok1gshd
ENSPVAG00000000684	SF3B3	100	99.753	ENSCGRG00000010180	Sf3b3	100	99.753	Cricetulus_griseus_crigri
ENSPVAG00000000684	SF3B3	82	92.615	ENSCSEG00000014192	sf3b3	99	92.615	Cynoglossus_semilaevis
ENSPVAG00000000684	SF3B3	100	92.605	ENSCVAG00000010459	sf3b3	100	92.605	Cyprinodon_variegatus
ENSPVAG00000000684	SF3B3	100	93.426	ENSDARG00000103553	sf3b3	100	93.426	Danio_rerio
ENSPVAG00000000684	SF3B3	85	99.807	ENSDNOG00000043626	SF3B3	100	99.807	Dasypus_novemcinctus
ENSPVAG00000000684	SF3B3	100	99.836	ENSDORG00000014176	Sf3b3	100	99.836	Dipodomys_ordii
ENSPVAG00000000684	SF3B3	100	75.224	FBgn0035162	Sf3b3	100	75.224	Drosophila_melanogaster
ENSPVAG00000000684	SF3B3	84	100.000	ENSETEG00000002729	SF3B3	84	100.000	Echinops_telfairi
ENSPVAG00000000684	SF3B3	100	87.757	ENSEBUG00000006117	sf3b3	100	87.757	Eptatretus_burgeri
ENSPVAG00000000684	SF3B3	100	99.918	ENSEASG00005013376	SF3B3	100	99.918	Equus_asinus_asinus
ENSPVAG00000000684	SF3B3	100	99.918	ENSECAG00000014053	SF3B3	100	99.918	Equus_caballus
ENSPVAG00000000684	SF3B3	93	99.643	ENSEEUG00000015611	SF3B3	93	99.643	Erinaceus_europaeus
ENSPVAG00000000684	SF3B3	100	91.393	ENSELUG00000015417	sf3b3	100	91.393	Esox_lucius
ENSPVAG00000000684	SF3B3	100	99.918	ENSFCAG00000009487	SF3B3	100	99.918	Felis_catus
ENSPVAG00000000684	SF3B3	100	98.932	ENSFALG00000007372	SF3B3	100	98.932	Ficedula_albicollis
ENSPVAG00000000684	SF3B3	100	99.753	ENSFDAG00000002608	SF3B3	100	99.753	Fukomys_damarensis
ENSPVAG00000000684	SF3B3	100	93.016	ENSFHEG00000017824	sf3b3	100	93.016	Fundulus_heteroclitus
ENSPVAG00000000684	SF3B3	100	89.409	ENSGMOG00000008139	sf3b3	100	89.409	Gadus_morhua
ENSPVAG00000000684	SF3B3	100	99.014	ENSGALG00000002531	SF3B3	100	99.014	Gallus_gallus
ENSPVAG00000000684	SF3B3	100	92.605	ENSGAFG00000015206	sf3b3	100	92.605	Gambusia_affinis
ENSPVAG00000000684	SF3B3	100	93.021	ENSGACG00000002646	sf3b3	100	93.021	Gasterosteus_aculeatus
ENSPVAG00000000684	SF3B3	96	98.890	ENSGAGG00000006746	SF3B3	97	98.890	Gopherus_agassizii
ENSPVAG00000000684	SF3B3	100	99.836	ENSGGOG00000003246	SF3B3	100	99.836	Gorilla_gorilla
ENSPVAG00000000684	SF3B3	92	85.714	ENSHBUG00000005960	sf3b3	100	86.875	Haplochromis_burtoni
ENSPVAG00000000684	SF3B3	100	99.836	ENSHGLG00000010135	SF3B3	100	99.836	Heterocephalus_glaber_female
ENSPVAG00000000684	SF3B3	100	97.648	ENSHGLG00100011148	SF3B3	100	97.648	Heterocephalus_glaber_male
ENSPVAG00000000684	SF3B3	100	92.687	ENSHCOG00000011981	sf3b3	100	92.687	Hippocampus_comes
ENSPVAG00000000684	SF3B3	100	93.098	ENSIPUG00000020435	sf3b3	100	93.098	Ictalurus_punctatus
ENSPVAG00000000684	SF3B3	100	99.836	ENSSTOG00000007065	SF3B3	100	99.836	Ictidomys_tridecemlineatus
ENSPVAG00000000684	SF3B3	100	99.836	ENSJJAG00000003948	Sf3b3	100	99.836	Jaculus_jaculus
ENSPVAG00000000684	SF3B3	100	90.797	ENSKMAG00000004066	sf3b3	99	92.997	Kryptolebias_marmoratus
ENSPVAG00000000684	SF3B3	100	92.933	ENSLBEG00000018302	sf3b3	100	92.933	Labrus_bergylta
ENSPVAG00000000684	SF3B3	98	92.276	ENSLACG00000012501	SF3B3	99	92.276	Latimeria_chalumnae
ENSPVAG00000000684	SF3B3	100	94.089	ENSLOCG00000007566	sf3b3	100	94.089	Lepisosteus_oculatus
ENSPVAG00000000684	SF3B3	100	99.918	ENSLAFG00000012219	SF3B3	100	99.918	Loxodonta_africana
ENSPVAG00000000684	SF3B3	100	99.836	ENSMFAG00000045487	SF3B3	100	99.836	Macaca_fascicularis
ENSPVAG00000000684	SF3B3	100	99.836	ENSMMUG00000017812	SF3B3	100	99.836	Macaca_mulatta
ENSPVAG00000000684	SF3B3	100	99.836	ENSMNEG00000033385	SF3B3	100	99.836	Macaca_nemestrina
ENSPVAG00000000684	SF3B3	100	96.302	ENSMLEG00000043891	SF3B3	97	99.363	Mandrillus_leucophaeus
ENSPVAG00000000684	SF3B3	100	93.509	ENSMAMG00000016837	sf3b3	100	93.509	Mastacembelus_armatus
ENSPVAG00000000684	SF3B3	89	90.194	ENSMZEG00005026015	sf3b3	99	90.194	Maylandia_zebra
ENSPVAG00000000684	SF3B3	100	93.098	ENSMZEG00005010836	sf3b3	100	93.098	Maylandia_zebra
ENSPVAG00000000684	SF3B3	100	99.014	ENSMGAG00000001597	SF3B3	100	99.014	Meleagris_gallopavo
ENSPVAG00000000684	SF3B3	81	82.540	ENSMAUG00000013618	Sf3b3	95	82.540	Mesocricetus_auratus
ENSPVAG00000000684	SF3B3	100	98.687	ENSMICG00000001363	SF3B3	100	98.687	Microcebus_murinus
ENSPVAG00000000684	SF3B3	100	99.753	ENSMOCG00000006108	Sf3b3	100	99.753	Microtus_ochrogaster
ENSPVAG00000000684	SF3B3	89	90.564	ENSMMOG00000002598	sf3b3	97	90.564	Mola_mola
ENSPVAG00000000684	SF3B3	100	95.320	ENSMODG00000014363	SF3B3	100	95.320	Monodelphis_domestica
ENSPVAG00000000684	SF3B3	100	93.180	ENSMALG00000008014	sf3b3	100	93.180	Monopterus_albus
ENSPVAG00000000684	SF3B3	100	99.671	MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.671	Mus_caroli
ENSPVAG00000000684	SF3B3	100	99.753	ENSMUSG00000033732	Sf3b3	100	99.753	Mus_musculus
ENSPVAG00000000684	SF3B3	100	99.671	MGP_SPRETEiJ_G0032681	Sf3b3	100	99.671	Mus_spretus
ENSPVAG00000000684	SF3B3	100	99.918	ENSMPUG00000010277	SF3B3	100	99.918	Mustela_putorius_furo
ENSPVAG00000000684	SF3B3	100	99.671	ENSMLUG00000014607	SF3B3	100	99.671	Myotis_lucifugus
ENSPVAG00000000684	SF3B3	100	99.836	ENSNGAG00000021903	Sf3b3	100	99.836	Nannospalax_galili
ENSPVAG00000000684	SF3B3	83	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSPVAG00000000684	SF3B3	100	98.358	ENSNLEG00000016127	SF3B3	99	99.363	Nomascus_leucogenys
ENSPVAG00000000684	SF3B3	92	98.945	ENSMEUG00000004479	SF3B3	94	98.945	Notamacropus_eugenii
ENSPVAG00000000684	SF3B3	98	96.563	ENSOPRG00000009847	SF3B3	100	96.563	Ochotona_princeps
ENSPVAG00000000684	SF3B3	100	99.753	ENSODEG00000014154	SF3B3	100	99.753	Octodon_degus
ENSPVAG00000000684	SF3B3	100	93.344	ENSONIG00000011198	sf3b3	100	93.344	Oreochromis_niloticus
ENSPVAG00000000684	SF3B3	100	99.671	ENSOANG00000001161	-	100	99.671	Ornithorhynchus_anatinus
ENSPVAG00000000684	SF3B3	100	97.453	ENSOCUG00000004139	SF3B3	100	97.453	Oryctolagus_cuniculus
ENSPVAG00000000684	SF3B3	100	93.180	ENSORLG00000013472	sf3b3	100	93.180	Oryzias_latipes
ENSPVAG00000000684	SF3B3	100	93.180	ENSORLG00020017473	sf3b3	100	93.180	Oryzias_latipes_hni
ENSPVAG00000000684	SF3B3	100	93.180	ENSORLG00015007710	sf3b3	100	93.180	Oryzias_latipes_hsok
ENSPVAG00000000684	SF3B3	100	92.933	ENSOMEG00000014483	sf3b3	100	92.933	Oryzias_melastigma
ENSPVAG00000000684	SF3B3	100	99.426	ENSOGAG00000016051	SF3B3	100	99.426	Otolemur_garnettii
ENSPVAG00000000684	SF3B3	100	99.672	ENSOARG00000004816	SF3B3	100	99.672	Ovis_aries
ENSPVAG00000000684	SF3B3	100	99.836	ENSPPAG00000026807	SF3B3	100	99.836	Pan_paniscus
ENSPVAG00000000684	SF3B3	100	99.918	ENSPPRG00000001686	SF3B3	100	99.918	Panthera_pardus
ENSPVAG00000000684	SF3B3	89	96.872	ENSPTIG00000020382	SF3B3	100	96.872	Panthera_tigris_altaica
ENSPVAG00000000684	SF3B3	100	99.836	ENSPTRG00000008308	SF3B3	100	99.836	Pan_troglodytes
ENSPVAG00000000684	SF3B3	100	99.836	ENSPANG00000024075	SF3B3	100	99.836	Papio_anubis
ENSPVAG00000000684	SF3B3	100	92.605	ENSPKIG00000002712	sf3b3	100	92.605	Paramormyrops_kingsleyae
ENSPVAG00000000684	SF3B3	89	98.988	ENSPSIG00000002232	SF3B3	100	98.988	Pelodiscus_sinensis
ENSPVAG00000000684	SF3B3	100	99.753	ENSPEMG00000008603	Sf3b3	100	99.753	Peromyscus_maniculatus_bairdii
ENSPVAG00000000684	SF3B3	100	91.865	ENSPMAG00000001793	sf3b3	100	91.865	Petromyzon_marinus
ENSPVAG00000000684	SF3B3	100	99.671	ENSPCIG00000014927	SF3B3	100	99.671	Phascolarctos_cinereus
ENSPVAG00000000684	SF3B3	100	92.687	ENSPFOG00000015516	sf3b3	100	92.687	Poecilia_formosa
ENSPVAG00000000684	SF3B3	100	92.687	ENSPLAG00000014330	sf3b3	100	92.687	Poecilia_latipinna
ENSPVAG00000000684	SF3B3	100	92.769	ENSPMEG00000019856	sf3b3	100	92.769	Poecilia_mexicana
ENSPVAG00000000684	SF3B3	81	93.699	ENSPREG00000019669	sf3b3	97	93.699	Poecilia_reticulata
ENSPVAG00000000684	SF3B3	95	99.708	ENSPPYG00000007539	SF3B3	100	99.708	Pongo_abelii
ENSPVAG00000000684	SF3B3	100	78.225	ENSPCAG00000002623	SF3B3	100	78.225	Procavia_capensis
ENSPVAG00000000684	SF3B3	84	100.000	ENSPCOG00000026582	SF3B3	100	100.000	Propithecus_coquereli
ENSPVAG00000000684	SF3B3	100	93.180	ENSPNYG00000003528	sf3b3	100	93.180	Pundamilia_nyererei
ENSPVAG00000000684	SF3B3	100	93.344	ENSPNAG00000015419	sf3b3	100	93.344	Pygocentrus_nattereri
ENSPVAG00000000684	SF3B3	100	99.753	ENSRNOG00000017724	Sf3b3	100	99.753	Rattus_norvegicus
ENSPVAG00000000684	SF3B3	100	99.836	ENSRBIG00000021904	SF3B3	100	99.836	Rhinopithecus_bieti
ENSPVAG00000000684	SF3B3	100	99.836	ENSRROG00000045703	SF3B3	100	99.836	Rhinopithecus_roxellana
ENSPVAG00000000684	SF3B3	92	41.935	YML049C	-	84	41.935	Saccharomyces_cerevisiae
ENSPVAG00000000684	SF3B3	100	99.836	ENSSBOG00000029156	SF3B3	100	99.836	Saimiri_boliviensis_boliviensis
ENSPVAG00000000684	SF3B3	100	99.671	ENSSHAG00000000372	SF3B3	100	99.671	Sarcophilus_harrisii
ENSPVAG00000000684	SF3B3	100	93.755	ENSSFOG00015012877	sf3b3	100	93.755	Scleropages_formosus
ENSPVAG00000000684	SF3B3	100	92.851	ENSSMAG00000014386	sf3b3	100	92.851	Scophthalmus_maximus
ENSPVAG00000000684	SF3B3	100	93.591	ENSSDUG00000021201	sf3b3	100	93.591	Seriola_dumerili
ENSPVAG00000000684	SF3B3	100	93.509	ENSSLDG00000017532	sf3b3	100	93.509	Seriola_lalandi_dorsalis
ENSPVAG00000000684	SF3B3	93	100.000	ENSSARG00000006917	SF3B3	93	100.000	Sorex_araneus
ENSPVAG00000000684	SF3B3	100	98.932	ENSSPUG00000006253	SF3B3	100	98.932	Sphenodon_punctatus
ENSPVAG00000000684	SF3B3	100	85.703	ENSSPAG00000003125	sf3b3	100	85.703	Stegastes_partitus
ENSPVAG00000000684	SF3B3	100	99.918	ENSSSCG00000025323	SF3B3	100	99.918	Sus_scrofa
ENSPVAG00000000684	SF3B3	100	99.097	ENSTGUG00000006082	SF3B3	100	99.097	Taeniopygia_guttata
ENSPVAG00000000684	SF3B3	89	93.199	ENSTNIG00000004857	sf3b3	100	93.199	Tetraodon_nigroviridis
ENSPVAG00000000684	SF3B3	93	84.595	ENSTBEG00000002946	SF3B3	100	84.595	Tupaia_belangeri
ENSPVAG00000000684	SF3B3	100	99.096	ENSTTRG00000005855	SF3B3	100	99.096	Tursiops_truncatus
ENSPVAG00000000684	SF3B3	100	99.918	ENSUAMG00000006780	SF3B3	100	99.918	Ursus_americanus
ENSPVAG00000000684	SF3B3	100	99.918	ENSUMAG00000017757	SF3B3	100	99.918	Ursus_maritimus
ENSPVAG00000000684	SF3B3	100	83.730	ENSVPAG00000003202	SF3B3	100	83.730	Vicugna_pacos
ENSPVAG00000000684	SF3B3	100	99.836	ENSVVUG00000017922	SF3B3	100	99.836	Vulpes_vulpes
ENSPVAG00000000684	SF3B3	100	96.713	ENSXETG00000032869	SF3B3	100	96.713	Xenopus_tropicalis
ENSPVAG00000000684	SF3B3	77	94.268	ENSXCOG00000013628	sf3b3	97	94.268	Xiphophorus_couchianus
ENSPVAG00000000684	SF3B3	100	92.687	ENSXMAG00000006334	sf3b3	99	93.902	Xiphophorus_maculatus