EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000000851 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 44994 bases
Position: chrGeneScaffold_1634:461712-506705
Accession: 16792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000000804	EST1	PF10374.9	9.7e-24	1	1
ENSPVAP00000000804	EST1_DNA_bind	PF10373.9	1.8e-43	1	2
ENSPVAP00000000804	EST1_DNA_bind	PF10373.9	1.8e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000000851	SMG7-201	3501	-	ENSPVAP00000000804	1166 (aa)	-	UPI00018B44C0

Gene Model

Click here to download ENSPVAG00000000851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000000851's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000000851	SMG7	100	85.544	ENSG00000116698	SMG7	100	90.621	Homo_sapiens
ENSPVAG00000000851	SMG7	89	52.704	ENSAPOG00000009611	smg7	90	52.704	Acanthochromis_polyacanthus
ENSPVAG00000000851	SMG7	86	87.559	ENSAMEG00000002357	SMG7	92	87.749	Ailuropoda_melanoleuca
ENSPVAG00000000851	SMG7	86	56.586	ENSACIG00000015152	smg7	91	56.586	Amphilophus_citrinellus
ENSPVAG00000000851	SMG7	89	60.827	ENSAOCG00000013538	smg7	91	61.006	Amphiprion_ocellaris
ENSPVAG00000000851	SMG7	89	60.682	ENSAPEG00000007851	smg7	91	60.862	Amphiprion_percula
ENSPVAG00000000851	SMG7	89	58.550	ENSATEG00000006931	smg7	91	58.781	Anabas_testudineus
ENSPVAG00000000851	SMG7	89	76.606	ENSAPLG00000015811	SMG7	91	76.606	Anas_platyrhynchos
ENSPVAG00000000851	SMG7	89	79.087	ENSACAG00000014989	SMG7	91	79.452	Anolis_carolinensis
ENSPVAG00000000851	SMG7	99	85.603	ENSANAG00000028114	SMG7	99	85.362	Aotus_nancymaae
ENSPVAG00000000851	SMG7	89	59.715	ENSACLG00000022079	smg7	91	60.306	Astatotilapia_calliptera
ENSPVAG00000000851	SMG7	89	62.466	ENSAMXG00000020809	smg7	91	62.774	Astyanax_mexicanus
ENSPVAG00000000851	SMG7	89	91.058	ENSBTAG00000008003	SMG7	89	91.058	Bos_taurus
ENSPVAG00000000851	SMG7	100	85.532	ENSCJAG00000005135	SMG7	99	85.532	Callithrix_jacchus
ENSPVAG00000000851	SMG7	89	92.308	ENSCAFG00000013276	SMG7	89	92.308	Canis_familiaris
ENSPVAG00000000851	SMG7	89	92.308	ENSCAFG00020015475	SMG7	84	98.065	Canis_lupus_dingo
ENSPVAG00000000851	SMG7	89	91.154	ENSCHIG00000018192	SMG7	91	91.154	Capra_hircus
ENSPVAG00000000851	SMG7	99	85.030	ENSTSYG00000002667	SMG7	99	85.030	Carlito_syrichta
ENSPVAG00000000851	SMG7	89	91.154	ENSCPOG00000008906	SMG7	92	90.144	Cavia_porcellus
ENSPVAG00000000851	SMG7	86	87.369	ENSCCAG00000028596	SMG7	85	98.077	Cebus_capucinus
ENSPVAG00000000851	SMG7	89	91.731	ENSCATG00000011063	SMG7	85	98.077	Cercocebus_atys
ENSPVAG00000000851	SMG7	89	91.250	ENSCLAG00000010751	SMG7	92	90.918	Chinchilla_lanigera
ENSPVAG00000000851	SMG7	89	91.635	ENSCSAG00000012654	SMG7	89	91.635	Chlorocebus_sabaeus
ENSPVAG00000000851	SMG7	95	77.013	ENSCHOG00000010522	SMG7	99	77.370	Choloepus_hoffmanni
ENSPVAG00000000851	SMG7	89	83.732	ENSCPBG00000015724	SMG7	91	83.732	Chrysemys_picta_bellii
ENSPVAG00000000851	SMG7	86	87.464	ENSCANG00000015680	SMG7	85	98.077	Colobus_angolensis_palliatus
ENSPVAG00000000851	SMG7	89	90.000	ENSCGRG00001013705	Smg7	92	89.675	Cricetulus_griseus_chok1gshd
ENSPVAG00000000851	SMG7	89	90.000	ENSCGRG00000018401	Smg7	90	90.000	Cricetulus_griseus_crigri
ENSPVAG00000000851	SMG7	82	69.903	ENSCVAG00000011842	smg7	91	70.874	Cyprinodon_variegatus
ENSPVAG00000000851	SMG7	89	62.523	ENSDARG00000060767	smg7	91	62.613	Danio_rerio
ENSPVAG00000000851	SMG7	89	90.577	ENSDORG00000007331	Smg7	92	90.249	Dipodomys_ordii
ENSPVAG00000000851	SMG7	89	89.675	ENSETEG00000002654	SMG7	95	90.153	Echinops_telfairi
ENSPVAG00000000851	SMG7	89	92.596	ENSEASG00005006524	SMG7	92	92.256	Equus_asinus_asinus
ENSPVAG00000000851	SMG7	89	92.692	ENSECAG00000004313	SMG7	92	92.352	Equus_caballus
ENSPVAG00000000851	SMG7	98	85.195	ENSEEUG00000002024	SMG7	98	85.195	Erinaceus_europaeus
ENSPVAG00000000851	SMG7	82	70.631	ENSELUG00000010293	smg7	93	60.956	Esox_lucius
ENSPVAG00000000851	SMG7	99	86.130	ENSFCAG00000010900	SMG7	98	86.130	Felis_catus
ENSPVAG00000000851	SMG7	88	78.281	ENSFALG00000003047	SMG7	92	77.819	Ficedula_albicollis
ENSPVAG00000000851	SMG7	89	91.049	ENSFDAG00000012121	SMG7	91	90.874	Fukomys_damarensis
ENSPVAG00000000851	SMG7	89	56.636	ENSFHEG00000011073	smg7	91	56.577	Fundulus_heteroclitus
ENSPVAG00000000851	SMG7	81	61.877	ENSGMOG00000004916	smg7	86	61.877	Gadus_morhua
ENSPVAG00000000851	SMG7	89	76.994	ENSGALG00000004667	SMG7	91	76.810	Gallus_gallus
ENSPVAG00000000851	SMG7	89	56.857	ENSGAFG00000019000	smg7	91	56.767	Gambusia_affinis
ENSPVAG00000000851	SMG7	89	60.914	ENSGACG00000001634	smg7	90	65.354	Gasterosteus_aculeatus
ENSPVAG00000000851	SMG7	89	91.442	ENSGGOG00000002342	SMG7	89	91.442	Gorilla_gorilla
ENSPVAG00000000851	SMG7	81	74.757	ENSHBUG00000003726	smg7	92	74.757	Haplochromis_burtoni
ENSPVAG00000000851	SMG7	88	91.165	ENSHGLG00000009353	SMG7	92	91.165	Heterocephalus_glaber_female
ENSPVAG00000000851	SMG7	88	89.320	ENSHGLG00100009637	-	92	89.320	Heterocephalus_glaber_male
ENSPVAG00000000851	SMG7	89	83.923	ENSHGLG00100004878	-	91	83.923	Heterocephalus_glaber_male
ENSPVAG00000000851	SMG7	89	63.038	ENSIPUG00000016997	smg7	91	63.312	Ictalurus_punctatus
ENSPVAG00000000851	SMG7	89	91.827	ENSSTOG00000000401	SMG7	92	91.491	Ictidomys_tridecemlineatus
ENSPVAG00000000851	SMG7	89	89.484	ENSJJAG00000012351	Smg7	92	89.484	Jaculus_jaculus
ENSPVAG00000000851	SMG7	80	68.966	ENSKMAG00000004900	smg7	88	73.786	Kryptolebias_marmoratus
ENSPVAG00000000851	SMG7	89	58.371	ENSLBEG00000002983	smg7	91	58.552	Labrus_bergylta
ENSPVAG00000000851	SMG7	89	71.105	ENSLACG00000000972	SMG7	91	70.794	Latimeria_chalumnae
ENSPVAG00000000851	SMG7	89	64.882	ENSLOCG00000002010	smg7	91	64.882	Lepisosteus_oculatus
ENSPVAG00000000851	SMG7	89	91.250	ENSLAFG00000008186	SMG7	91	91.162	Loxodonta_africana
ENSPVAG00000000851	SMG7	89	91.635	ENSMFAG00000031653	SMG7	92	91.300	Macaca_fascicularis
ENSPVAG00000000851	SMG7	100	85.799	ENSMMUG00000018458	SMG7	99	85.799	Macaca_mulatta
ENSPVAG00000000851	SMG7	86	87.464	ENSMNEG00000034798	SMG7	85	98.077	Macaca_nemestrina
ENSPVAG00000000851	SMG7	89	91.731	ENSMLEG00000037170	SMG7	89	91.731	Mandrillus_leucophaeus
ENSPVAG00000000851	SMG7	85	59.442	ENSMAMG00000018733	smg7	82	64.407	Mastacembelus_armatus
ENSPVAG00000000851	SMG7	89	60.179	ENSMZEG00005015247	smg7	91	60.306	Maylandia_zebra
ENSPVAG00000000851	SMG7	89	76.719	ENSMGAG00000001561	SMG7	91	76.535	Meleagris_gallopavo
ENSPVAG00000000851	SMG7	89	90.385	ENSMAUG00000019484	Smg7	92	90.057	Mesocricetus_auratus
ENSPVAG00000000851	SMG7	89	91.827	ENSMICG00000007145	SMG7	90	91.827	Microcebus_murinus
ENSPVAG00000000851	SMG7	89	90.288	ENSMOCG00000020748	Smg7	92	89.962	Microtus_ochrogaster
ENSPVAG00000000851	SMG7	89	56.029	ENSMMOG00000001524	smg7	91	56.273	Mola_mola
ENSPVAG00000000851	SMG7	89	80.461	ENSMODG00000007139	SMG7	98	78.986	Monodelphis_domestica
ENSPVAG00000000851	SMG7	83	70.874	ENSMALG00000000061	smg7	84	70.874	Monopterus_albus
ENSPVAG00000000851	SMG7	89	89.808	MGP_CAROLIEiJ_G0014704	Smg7	92	89.101	Mus_caroli
ENSPVAG00000000851	SMG7	89	89.615	ENSMUSG00000042772	Smg7	92	89.293	Mus_musculus
ENSPVAG00000000851	SMG7	89	89.904	MGP_PahariEiJ_G0027940	Smg7	92	89.579	Mus_pahari
ENSPVAG00000000851	SMG7	89	89.712	MGP_SPRETEiJ_G0015511	Smg7	92	89.388	Mus_spretus
ENSPVAG00000000851	SMG7	88	92.136	ENSMPUG00000011732	SMG7	89	92.136	Mustela_putorius_furo
ENSPVAG00000000851	SMG7	89	91.827	ENSMLUG00000015417	SMG7	91	91.827	Myotis_lucifugus
ENSPVAG00000000851	SMG7	89	90.288	ENSNGAG00000009836	Smg7	92	88.910	Nannospalax_galili
ENSPVAG00000000851	SMG7	88	53.321	ENSNBRG00000024343	smg7	89	71.053	Neolamprologus_brichardi
ENSPVAG00000000851	SMG7	89	91.827	ENSNLEG00000018018	SMG7	89	91.827	Nomascus_leucogenys
ENSPVAG00000000851	SMG7	75	85.028	ENSMEUG00000004681	SMG7	82	85.237	Notamacropus_eugenii
ENSPVAG00000000851	SMG7	89	79.730	ENSOPRG00000013942	SMG7	91	79.440	Ochotona_princeps
ENSPVAG00000000851	SMG7	89	91.058	ENSODEG00000010390	SMG7	92	90.727	Octodon_degus
ENSPVAG00000000851	SMG7	89	58.094	ENSONIG00000000277	smg7	91	58.094	Oreochromis_niloticus
ENSPVAG00000000851	SMG7	88	85.880	ENSOANG00000000994	SMG7	92	86.364	Ornithorhynchus_anatinus
ENSPVAG00000000851	SMG7	89	85.577	ENSOCUG00000005887	SMG7	85	85.577	Oryctolagus_cuniculus
ENSPVAG00000000851	SMG7	89	57.832	ENSORLG00000007314	smg7	70	92.105	Oryzias_latipes
ENSPVAG00000000851	SMG7	89	58.197	ENSORLG00020015779	smg7	70	92.105	Oryzias_latipes_hni
ENSPVAG00000000851	SMG7	89	60.469	ENSORLG00015012289	smg7	91	58.711	Oryzias_latipes_hsok
ENSPVAG00000000851	SMG7	89	58.583	ENSOMEG00000002328	smg7	91	58.711	Oryzias_melastigma
ENSPVAG00000000851	SMG7	99	84.859	ENSOGAG00000003107	SMG7	99	85.030	Otolemur_garnettii
ENSPVAG00000000851	SMG7	89	90.865	ENSOARG00000001352	SMG7	89	90.865	Ovis_aries
ENSPVAG00000000851	SMG7	86	87.464	ENSPPAG00000031619	SMG7	85	98.077	Pan_paniscus
ENSPVAG00000000851	SMG7	99	86.301	ENSPPRG00000011222	SMG7	98	86.301	Panthera_pardus
ENSPVAG00000000851	SMG7	99	86.301	ENSPTIG00000007242	SMG7	98	86.301	Panthera_tigris_altaica
ENSPVAG00000000851	SMG7	100	85.799	ENSPTRG00000001764	SMG7	99	85.799	Pan_troglodytes
ENSPVAG00000000851	SMG7	100	85.799	ENSPANG00000004520	SMG7	99	85.799	Papio_anubis
ENSPVAG00000000851	SMG7	82	71.028	ENSPKIG00000007242	smg7	91	71.028	Paramormyrops_kingsleyae
ENSPVAG00000000851	SMG7	89	86.827	ENSPSIG00000012201	SMG7	91	86.250	Pelodiscus_sinensis
ENSPVAG00000000851	SMG7	89	89.327	ENSPEMG00000011315	Smg7	92	89.006	Peromyscus_maniculatus_bairdii
ENSPVAG00000000851	SMG7	89	84.158	ENSPCIG00000003786	SMG7	90	94.444	Phascolarctos_cinereus
ENSPVAG00000000851	SMG7	89	59.021	ENSPFOG00000019219	smg7	91	58.840	Poecilia_formosa
ENSPVAG00000000851	SMG7	89	57.169	ENSPLAG00000001446	smg7	91	56.897	Poecilia_latipinna
ENSPVAG00000000851	SMG7	89	57.169	ENSPMEG00000005218	smg7	93	56.897	Poecilia_mexicana
ENSPVAG00000000851	SMG7	84	56.244	ENSPREG00000019039	smg7	97	53.911	Poecilia_reticulata
ENSPVAG00000000851	SMG7	89	83.242	ENSPPYG00000000427	SMG7	92	83.242	Pongo_abelii
ENSPVAG00000000851	SMG7	98	74.545	ENSPCAG00000008360	SMG7	100	74.545	Procavia_capensis
ENSPVAG00000000851	SMG7	100	86.139	ENSPCOG00000011996	SMG7	99	86.139	Propithecus_coquereli
ENSPVAG00000000851	SMG7	89	60.270	ENSPNYG00000007643	smg7	91	60.180	Pundamilia_nyererei
ENSPVAG00000000851	SMG7	89	62.329	ENSPNAG00000011374	smg7	89	71.287	Pygocentrus_nattereri
ENSPVAG00000000851	SMG7	89	90.010	ENSRNOG00000027962	Smg7	100	89.300	Rattus_norvegicus
ENSPVAG00000000851	SMG7	89	91.731	ENSRBIG00000036316	SMG7	89	91.731	Rhinopithecus_bieti
ENSPVAG00000000851	SMG7	89	91.731	ENSRROG00000035719	SMG7	92	91.396	Rhinopithecus_roxellana
ENSPVAG00000000851	SMG7	89	91.396	ENSSBOG00000023454	SMG7	88	95.652	Saimiri_boliviensis_boliviensis
ENSPVAG00000000851	SMG7	89	80.000	ENSSHAG00000013147	SMG7	91	78.453	Sarcophilus_harrisii
ENSPVAG00000000851	SMG7	81	74.227	ENSSFOG00015017252	smg7	90	74.227	Scleropages_formosus
ENSPVAG00000000851	SMG7	89	60.507	ENSSMAG00000006067	smg7	91	60.488	Scophthalmus_maximus
ENSPVAG00000000851	SMG7	89	58.776	ENSSDUG00000017543	smg7	91	58.776	Seriola_dumerili
ENSPVAG00000000851	SMG7	89	77.778	ENSSPUG00000002064	SMG7	91	76.860	Sphenodon_punctatus
ENSPVAG00000000851	SMG7	87	58.786	ENSSPAG00000008733	smg7	89	58.786	Stegastes_partitus
ENSPVAG00000000851	SMG7	89	92.404	ENSSSCG00000015558	SMG7	92	92.065	Sus_scrofa
ENSPVAG00000000851	SMG7	89	76.994	ENSTGUG00000003928	SMG7	92	76.994	Taeniopygia_guttata
ENSPVAG00000000851	SMG7	89	59.982	ENSTNIG00000002802	smg7	91	59.743	Tetraodon_nigroviridis
ENSPVAG00000000851	SMG7	81	91.863	ENSTBEG00000003220	SMG7	81	92.291	Tupaia_belangeri
ENSPVAG00000000851	SMG7	99	85.922	ENSTTRG00000014778	SMG7	100	86.348	Tursiops_truncatus
ENSPVAG00000000851	SMG7	86	87.289	ENSUAMG00000017473	SMG7	91	87.289	Ursus_americanus
ENSPVAG00000000851	SMG7	86	92.056	ENSUMAG00000016389	SMG7	92	92.056	Ursus_maritimus
ENSPVAG00000000851	SMG7	89	92.404	ENSVVUG00000008976	SMG7	92	92.065	Vulpes_vulpes
ENSPVAG00000000851	SMG7	89	61.469	ENSXETG00000012528	smg7	91	61.293	Xenopus_tropicalis
ENSPVAG00000000851	SMG7	89	56.664	ENSXMAG00000007123	smg7	91	56.664	Xiphophorus_maculatus