EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000000889 (Gene tree)
Gene ID: -
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 58892 bases
Position: chrGeneScaffold_2471:200487-259378
Accession: 17344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000000842	Npa1	PF11707.8	4.2e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000000889	URB1-201	6762	-	ENSPVAP00000000842	2253 (aa)	-	UPI00018B461F

Gene Model

Click here to download ENSPVAG00000000889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000000889's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000000889	URB1	99	80.778	ENSG00000142207	URB1	100	80.678	Homo_sapiens
ENSPVAG00000000889	URB1	99	42.059	ENSAPOG00000020308	urb1	99	42.190	Acanthochromis_polyacanthus
ENSPVAG00000000889	URB1	100	81.366	ENSAMEG00000011998	URB1	99	81.366	Ailuropoda_melanoleuca
ENSPVAG00000000889	URB1	95	44.460	ENSACIG00000003248	urb1	97	44.506	Amphilophus_citrinellus
ENSPVAG00000000889	URB1	99	40.000	ENSAOCG00000010364	urb1	99	40.131	Amphiprion_ocellaris
ENSPVAG00000000889	URB1	97	51.271	ENSAPEG00000010758	urb1	99	51.271	Amphiprion_percula
ENSPVAG00000000889	URB1	98	43.950	ENSATEG00000011790	urb1	96	43.950	Anabas_testudineus
ENSPVAG00000000889	URB1	97	54.554	ENSAPLG00000012791	URB1	100	54.599	Anas_platyrhynchos
ENSPVAG00000000889	URB1	99	52.033	ENSACAG00000002817	URB1	99	52.009	Anolis_carolinensis
ENSPVAG00000000889	URB1	100	79.806	ENSANAG00000024617	URB1	100	79.806	Aotus_nancymaae
ENSPVAG00000000889	URB1	98	44.071	ENSACLG00000024865	urb1	99	43.827	Astatotilapia_calliptera
ENSPVAG00000000889	URB1	99	39.303	ENSAMXG00000012306	urb1	99	39.421	Astyanax_mexicanus
ENSPVAG00000000889	URB1	99	77.919	ENSBTAG00000012412	URB1	99	78.051	Bos_taurus
ENSPVAG00000000889	URB1	100	79.482	ENSCJAG00000009118	URB1	100	79.482	Callithrix_jacchus
ENSPVAG00000000889	URB1	100	81.730	ENSCAFG00000008892	URB1	100	81.730	Canis_familiaris
ENSPVAG00000000889	URB1	100	81.374	ENSCAFG00020025987	-	100	81.374	Canis_lupus_dingo
ENSPVAG00000000889	URB1	100	80.449	ENSCAFG00020025994	-	100	80.449	Canis_lupus_dingo
ENSPVAG00000000889	URB1	99	77.480	ENSCHIG00000015645	URB1	99	77.480	Capra_hircus
ENSPVAG00000000889	URB1	100	79.789	ENSTSYG00000013286	URB1	99	79.877	Carlito_syrichta
ENSPVAG00000000889	URB1	98	74.024	ENSCAPG00000015589	URB1	99	74.024	Cavia_aperea
ENSPVAG00000000889	URB1	99	75.264	ENSCPOG00000006748	URB1	99	75.264	Cavia_porcellus
ENSPVAG00000000889	URB1	100	80.150	ENSCCAG00000021299	URB1	100	80.238	Cebus_capucinus
ENSPVAG00000000889	URB1	100	79.886	ENSCATG00000042630	URB1	100	80.062	Cercocebus_atys
ENSPVAG00000000889	URB1	100	76.440	ENSCLAG00000005262	URB1	100	76.440	Chinchilla_lanigera
ENSPVAG00000000889	URB1	100	78.352	ENSCSAG00000009584	URB1	100	78.528	Chlorocebus_sabaeus
ENSPVAG00000000889	URB1	99	57.037	ENSCPBG00000006454	URB1	99	57.080	Chrysemys_picta_bellii
ENSPVAG00000000889	URB1	100	79.798	ENSCANG00000031088	URB1	100	79.974	Colobus_angolensis_palliatus
ENSPVAG00000000889	URB1	98	73.360	ENSCGRG00001010616	Urb1	99	73.128	Cricetulus_griseus_chok1gshd
ENSPVAG00000000889	URB1	98	73.108	ENSCGRG00000015840	Urb1	99	73.108	Cricetulus_griseus_crigri
ENSPVAG00000000889	URB1	99	41.930	ENSCSEG00000012616	urb1	99	41.930	Cynoglossus_semilaevis
ENSPVAG00000000889	URB1	91	55.307	ENSCVAG00000009076	urb1	96	55.307	Cyprinodon_variegatus
ENSPVAG00000000889	URB1	99	42.669	ENSDARG00000060308	urb1	99	42.932	Danio_rerio
ENSPVAG00000000889	URB1	85	77.899	ENSDNOG00000015586	URB1	99	77.899	Dasypus_novemcinctus
ENSPVAG00000000889	URB1	100	77.333	ENSDORG00000006735	Urb1	100	77.333	Dipodomys_ordii
ENSPVAG00000000889	URB1	92	79.091	ENSETEG00000009080	URB1	92	79.091	Echinops_telfairi
ENSPVAG00000000889	URB1	100	82.203	ENSEASG00005007711	URB1	100	82.203	Equus_asinus_asinus
ENSPVAG00000000889	URB1	100	83.568	ENSECAG00000013206	URB1	99	89.367	Equus_caballus
ENSPVAG00000000889	URB1	57	87.083	ENSEEUG00000003626	-	58	87.083	Erinaceus_europaeus
ENSPVAG00000000889	URB1	99	43.908	ENSELUG00000020516	urb1	98	43.839	Esox_lucius
ENSPVAG00000000889	URB1	100	81.057	ENSFCAG00000002177	URB1	100	81.110	Felis_catus
ENSPVAG00000000889	URB1	98	50.750	ENSFALG00000004636	URB1	99	50.707	Ficedula_albicollis
ENSPVAG00000000889	URB1	100	76.383	ENSFDAG00000007288	URB1	95	76.383	Fukomys_damarensis
ENSPVAG00000000889	URB1	99	41.722	ENSFHEG00000000202	urb1	99	41.747	Fundulus_heteroclitus
ENSPVAG00000000889	URB1	92	46.318	ENSGMOG00000001838	urb1	93	46.454	Gadus_morhua
ENSPVAG00000000889	URB1	99	54.577	ENSGALG00000015887	URB1	99	54.577	Gallus_gallus
ENSPVAG00000000889	URB1	94	51.706	ENSGAFG00000020694	urb1	98	51.706	Gambusia_affinis
ENSPVAG00000000889	URB1	99	44.405	ENSGACG00000011703	urb1	99	44.405	Gasterosteus_aculeatus
ENSPVAG00000000889	URB1	99	56.531	ENSGAGG00000022544	URB1	99	56.531	Gopherus_agassizii
ENSPVAG00000000889	URB1	100	80.546	ENSGGOG00000000285	URB1	100	80.546	Gorilla_gorilla
ENSPVAG00000000889	URB1	98	44.085	ENSHBUG00000001904	urb1	99	43.840	Haplochromis_burtoni
ENSPVAG00000000889	URB1	99	75.553	ENSHGLG00000004907	URB1	99	75.553	Heterocephalus_glaber_female
ENSPVAG00000000889	URB1	99	76.065	ENSHGLG00100010749	URB1	99	76.065	Heterocephalus_glaber_male
ENSPVAG00000000889	URB1	73	48.109	ENSHCOG00000018683	urb1	99	48.227	Hippocampus_comes
ENSPVAG00000000889	URB1	99	39.038	ENSIPUG00000014721	urb1	99	39.188	Ictalurus_punctatus
ENSPVAG00000000889	URB1	99	78.987	ENSSTOG00000004539	URB1	99	78.987	Ictidomys_tridecemlineatus
ENSPVAG00000000889	URB1	95	45.542	ENSKMAG00000006001	urb1	98	53.391	Kryptolebias_marmoratus
ENSPVAG00000000889	URB1	94	51.010	ENSLBEG00000027208	urb1	99	51.010	Labrus_bergylta
ENSPVAG00000000889	URB1	99	47.792	ENSLACG00000017059	URB1	99	47.769	Latimeria_chalumnae
ENSPVAG00000000889	URB1	99	44.972	ENSLOCG00000009190	urb1	99	44.972	Lepisosteus_oculatus
ENSPVAG00000000889	URB1	99	76.920	ENSLAFG00000010407	URB1	100	76.920	Loxodonta_africana
ENSPVAG00000000889	URB1	100	79.842	ENSMFAG00000034391	URB1	97	80.018	Macaca_fascicularis
ENSPVAG00000000889	URB1	100	79.665	ENSMMUG00000010295	URB1	100	79.842	Macaca_mulatta
ENSPVAG00000000889	URB1	100	78.521	ENSMNEG00000032981	URB1	100	78.697	Macaca_nemestrina
ENSPVAG00000000889	URB1	100	79.974	ENSMLEG00000041435	URB1	100	80.150	Mandrillus_leucophaeus
ENSPVAG00000000889	URB1	99	42.776	ENSMAMG00000011238	urb1	99	42.776	Mastacembelus_armatus
ENSPVAG00000000889	URB1	98	39.965	ENSMZEG00005011862	urb1	99	39.764	Maylandia_zebra
ENSPVAG00000000889	URB1	98	54.816	ENSMGAG00000014512	URB1	99	54.816	Meleagris_gallopavo
ENSPVAG00000000889	URB1	93	76.934	ENSMAUG00000010516	Urb1	99	77.226	Mesocricetus_auratus
ENSPVAG00000000889	URB1	99	79.348	ENSMICG00000016424	URB1	99	79.348	Microcebus_murinus
ENSPVAG00000000889	URB1	99	72.563	ENSMOCG00000012613	Urb1	99	72.563	Microtus_ochrogaster
ENSPVAG00000000889	URB1	99	62.335	ENSMODG00000021076	URB1	99	62.335	Monodelphis_domestica
ENSPVAG00000000889	URB1	96	52.099	ENSMALG00000017411	urb1	99	52.099	Monopterus_albus
ENSPVAG00000000889	URB1	99	72.063	MGP_CAROLIEiJ_G0020948	Urb1	99	72.063	Mus_caroli
ENSPVAG00000000889	URB1	99	72.239	ENSMUSG00000039929	Urb1	99	72.239	Mus_musculus
ENSPVAG00000000889	URB1	99	72.283	MGP_PahariEiJ_G0016653	Urb1	99	72.283	Mus_pahari
ENSPVAG00000000889	URB1	99	72.234	MGP_SPRETEiJ_G0021854	Urb1	99	72.234	Mus_spretus
ENSPVAG00000000889	URB1	100	80.529	ENSMPUG00000001123	URB1	100	80.529	Mustela_putorius_furo
ENSPVAG00000000889	URB1	99	73.712	ENSNGAG00000001905	Urb1	99	73.712	Nannospalax_galili
ENSPVAG00000000889	URB1	80	45.461	ENSNBRG00000001049	urb1	98	45.392	Neolamprologus_brichardi
ENSPVAG00000000889	URB1	99	78.347	ENSNLEG00000026872	URB1	100	78.257	Nomascus_leucogenys
ENSPVAG00000000889	URB1	96	59.535	ENSMEUG00000010828	URB1	96	59.472	Notamacropus_eugenii
ENSPVAG00000000889	URB1	99	71.178	ENSOPRG00000013482	URB1	100	71.178	Ochotona_princeps
ENSPVAG00000000889	URB1	100	75.066	ENSODEG00000002587	URB1	99	75.066	Octodon_degus
ENSPVAG00000000889	URB1	99	43.860	ENSONIG00000005599	urb1	99	43.860	Oreochromis_niloticus
ENSPVAG00000000889	URB1	99	77.225	ENSOCUG00000009381	URB1	99	77.225	Oryctolagus_cuniculus
ENSPVAG00000000889	URB1	99	43.188	ENSORLG00000003429	urb1	99	43.188	Oryzias_latipes
ENSPVAG00000000889	URB1	99	43.057	ENSORLG00020013785	urb1	99	43.057	Oryzias_latipes_hni
ENSPVAG00000000889	URB1	95	46.183	ENSORLG00015019421	urb1	99	45.938	Oryzias_latipes_hsok
ENSPVAG00000000889	URB1	77	51.122	ENSOMEG00000002094	urb1	98	51.122	Oryzias_melastigma
ENSPVAG00000000889	URB1	99	78.238	ENSOGAG00000017140	URB1	100	78.502	Otolemur_garnettii
ENSPVAG00000000889	URB1	97	78.372	ENSOARG00000013679	URB1	99	78.287	Ovis_aries
ENSPVAG00000000889	URB1	100	80.678	ENSPPAG00000003423	URB1	100	80.678	Pan_paniscus
ENSPVAG00000000889	URB1	100	81.366	ENSPPRG00000023131	URB1	100	81.366	Panthera_pardus
ENSPVAG00000000889	URB1	92	79.477	ENSPTIG00000016125	URB1	98	79.477	Panthera_tigris_altaica
ENSPVAG00000000889	URB1	100	80.546	ENSPTRG00000013852	URB1	100	80.546	Pan_troglodytes
ENSPVAG00000000889	URB1	100	80.062	ENSPANG00000021964	URB1	100	80.238	Papio_anubis
ENSPVAG00000000889	URB1	99	44.987	ENSPKIG00000003683	urb1	98	44.967	Paramormyrops_kingsleyae
ENSPVAG00000000889	URB1	100	72.967	ENSPEMG00000021205	Urb1	99	72.967	Peromyscus_maniculatus_bairdii
ENSPVAG00000000889	URB1	80	33.106	ENSPMAG00000009733	URB1	100	33.351	Petromyzon_marinus
ENSPVAG00000000889	URB1	99	62.906	ENSPCIG00000016350	URB1	99	63.210	Phascolarctos_cinereus
ENSPVAG00000000889	URB1	96	42.308	ENSPLAG00000004371	urb1	99	42.308	Poecilia_latipinna
ENSPVAG00000000889	URB1	99	42.632	ENSPMEG00000006634	urb1	99	42.632	Poecilia_mexicana
ENSPVAG00000000889	URB1	99	42.707	ENSPREG00000013453	urb1	99	42.707	Poecilia_reticulata
ENSPVAG00000000889	URB1	99	80.150	ENSPPYG00000011359	URB1	100	80.053	Pongo_abelii
ENSPVAG00000000889	URB1	99	69.408	ENSPCAG00000007430	URB1	99	69.408	Procavia_capensis
ENSPVAG00000000889	URB1	100	80.757	ENSPCOG00000022695	URB1	100	80.845	Propithecus_coquereli
ENSPVAG00000000889	URB1	98	43.079	ENSPNYG00000010589	urb1	99	42.845	Pundamilia_nyererei
ENSPVAG00000000889	URB1	99	39.833	ENSPNAG00000019324	urb1	99	39.692	Pygocentrus_nattereri
ENSPVAG00000000889	URB1	99	72.383	ENSRNOG00000002080	Urb1	99	72.515	Rattus_norvegicus
ENSPVAG00000000889	URB1	100	79.401	ENSRBIG00000033122	URB1	100	79.577	Rhinopithecus_bieti
ENSPVAG00000000889	URB1	100	79.401	ENSRROG00000040237	URB1	100	79.577	Rhinopithecus_roxellana
ENSPVAG00000000889	URB1	100	79.894	ENSSBOG00000027672	URB1	100	79.894	Saimiri_boliviensis_boliviensis
ENSPVAG00000000889	URB1	99	62.643	ENSSHAG00000005140	URB1	100	62.643	Sarcophilus_harrisii
ENSPVAG00000000889	URB1	92	45.403	ENSSFOG00015000339	urb1	99	45.356	Scleropages_formosus
ENSPVAG00000000889	URB1	99	43.755	ENSSMAG00000003782	urb1	99	43.837	Scophthalmus_maximus
ENSPVAG00000000889	URB1	99	44.440	ENSSDUG00000012313	urb1	99	44.440	Seriola_dumerili
ENSPVAG00000000889	URB1	99	44.106	ENSSLDG00000023179	urb1	99	44.106	Seriola_lalandi_dorsalis
ENSPVAG00000000889	URB1	99	53.954	ENSSPUG00000012447	URB1	99	53.910	Sphenodon_punctatus
ENSPVAG00000000889	URB1	99	43.437	ENSSPAG00000006325	urb1	99	43.567	Stegastes_partitus
ENSPVAG00000000889	URB1	100	79.665	ENSSSCG00000032024	URB1	100	79.665	Sus_scrofa
ENSPVAG00000000889	URB1	73	57.485	ENSTGUG00000013442	URB1	100	57.485	Taeniopygia_guttata
ENSPVAG00000000889	URB1	99	42.888	ENSTRUG00000009372	urb1	99	42.888	Takifugu_rubripes
ENSPVAG00000000889	URB1	99	41.906	ENSTNIG00000016277	urb1	99	41.810	Tetraodon_nigroviridis
ENSPVAG00000000889	URB1	81	73.913	ENSTBEG00000010044	URB1	81	73.913	Tupaia_belangeri
ENSPVAG00000000889	URB1	90	80.524	ENSTTRG00000007712	URB1	92	80.524	Tursiops_truncatus
ENSPVAG00000000889	URB1	100	81.410	ENSUAMG00000012231	URB1	99	81.410	Ursus_americanus
ENSPVAG00000000889	URB1	93	81.256	ENSUMAG00000017419	URB1	99	81.256	Ursus_maritimus
ENSPVAG00000000889	URB1	69	89.683	ENSVPAG00000001164	URB1	68	89.683	Vicugna_pacos
ENSPVAG00000000889	URB1	100	81.258	ENSVVUG00000000551	URB1	100	81.258	Vulpes_vulpes
ENSPVAG00000000889	URB1	99	48.402	ENSXETG00000009895	urb1	99	48.532	Xenopus_tropicalis
ENSPVAG00000000889	URB1	99	40.379	ENSXCOG00000005500	urb1	97	44.508	Xiphophorus_couchianus
ENSPVAG00000000889	URB1	99	40.723	ENSXMAG00000007253	urb1	97	44.635	Xiphophorus_maculatus