EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000000908 (Gene tree)
Gene ID: -
Gene Symbol: ZNF550
Alias: MGC41917
Full Name: zinc finger protein 550
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 7740 bases
Position: chrscaffold_10444:39286-47025
Accession: 28643
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000000860	zf-C2H2	PF00096.26	9e-26	1	4
ENSPVAP00000000860	zf-C2H2	PF00096.26	9e-26	2	4
ENSPVAP00000000860	zf-C2H2	PF00096.26	9e-26	3	4
ENSPVAP00000000860	zf-C2H2	PF00096.26	9e-26	4	4
ENSPVAP00000000860	zf-met	PF12874.7	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000000908	ZNF550-201	1209	-	ENSPVAP00000000860	402 (aa)	-	UPI00018B1743

Gene Model

Click here to download ENSPVAG00000000908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000000908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000000908	ZNF550	53	49.091	ENSPVAG00000001094	-	97	49.091
ENSPVAG00000000908	ZNF550	100	48.447	ENSPVAG00000006095	ZNF2	99	40.633
ENSPVAG00000000908	ZNF550	53	41.429	ENSPVAG00000013802	ZBTB17	56	41.429
ENSPVAG00000000908	ZNF550	52	30.594	ENSPVAG00000012837	GTF3A	63	30.594
ENSPVAG00000000908	ZNF550	98	49.083	ENSPVAG00000012830	-	99	49.083
ENSPVAG00000000908	ZNF550	54	37.647	ENSPVAG00000004548	ZNF784	66	37.037
ENSPVAG00000000908	ZNF550	57	38.739	ENSPVAG00000009457	SNAI2	57	38.739
ENSPVAG00000000908	ZNF550	64	35.678	ENSPVAG00000013020	ZBTB48	81	35.678
ENSPVAG00000000908	ZNF550	98	49.490	ENSPVAG00000000361	-	100	49.490
ENSPVAG00000000908	ZNF550	83	48.529	ENSPVAG00000004388	ZNF233	74	48.529
ENSPVAG00000000908	ZNF550	98	49.490	ENSPVAG00000015563	-	99	49.490
ENSPVAG00000000908	ZNF550	54	43.269	ENSPVAG00000008193	ZNF236	50	43.269
ENSPVAG00000000908	ZNF550	55	36.019	ENSPVAG00000016998	ZBTB41	68	36.019
ENSPVAG00000000908	ZNF550	99	47.739	ENSPVAG00000009430	-	99	47.739
ENSPVAG00000000908	ZNF550	70	47.739	ENSPVAG00000009433	-	76	47.739
ENSPVAG00000000908	ZNF550	79	55.102	ENSPVAG00000002257	-	83	55.102
ENSPVAG00000000908	ZNF550	100	49.774	ENSPVAG00000005467	ZNF81	98	44.393
ENSPVAG00000000908	ZNF550	61	45.749	ENSPVAG00000001626	-	89	45.749
ENSPVAG00000000908	ZNF550	57	40.271	ENSPVAG00000004612	ZNF319	87	40.271
ENSPVAG00000000908	ZNF550	57	39.819	ENSPVAG00000012309	PRDM5	78	39.819
ENSPVAG00000000908	ZNF550	54	39.091	ENSPVAG00000001749	PATZ1	52	33.333
ENSPVAG00000000908	ZNF550	54	50.000	ENSPVAG00000010064	ZNF768	54	50.000
ENSPVAG00000000908	ZNF550	98	51.364	ENSPVAG00000004394	ZNF112	97	49.545
ENSPVAG00000000908	ZNF550	70	51.515	ENSPVAG00000004392	ZNF235	80	51.515
ENSPVAG00000000908	ZNF550	90	52.632	ENSPVAG00000010053	ZFP69B	99	52.632
ENSPVAG00000000908	ZNF550	98	50.909	ENSPVAG00000015576	ZNF234	96	50.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000000908	ZNF550	100	71.734	ENSG00000251369	ZNF550	99	71.496	Homo_sapiens
ENSPVAG00000000908	ZNF550	100	71.875	ENSCATG00000020915	ZNF550	99	71.875	Cercocebus_atys
ENSPVAG00000000908	ZNF550	89	60.800	ENSCLAG00000000250	ZNF550	95	60.800	Chinchilla_lanigera
ENSPVAG00000000908	ZNF550	98	72.059	ENSCSAG00000001629	ZNF550	100	72.059	Chlorocebus_sabaeus
ENSPVAG00000000908	ZNF550	100	70.913	ENSCANG00000033735	ZNF550	99	70.673	Colobus_angolensis_palliatus
ENSPVAG00000000908	ZNF550	84	63.380	ENSDNOG00000033330	-	99	63.380	Dasypus_novemcinctus
ENSPVAG00000000908	ZNF550	100	66.348	ENSFCAG00000034766	ZNF550	99	66.348	Felis_catus
ENSPVAG00000000908	ZNF550	100	71.259	ENSGGOG00000014068	ZNF550	99	71.021	Gorilla_gorilla
ENSPVAG00000000908	ZNF550	100	64.423	ENSHGLG00000018048	ZNF550	99	64.423	Heterocephalus_glaber_female
ENSPVAG00000000908	ZNF550	100	72.115	ENSMFAG00000036005	ZNF550	99	72.115	Macaca_fascicularis
ENSPVAG00000000908	ZNF550	100	71.635	ENSMMUG00000006122	ZNF550	99	71.635	Macaca_mulatta
ENSPVAG00000000908	ZNF550	100	72.115	ENSMNEG00000041366	ZNF550	99	72.115	Macaca_nemestrina
ENSPVAG00000000908	ZNF550	100	71.635	ENSMLEG00000034688	ZNF550	99	71.635	Mandrillus_leucophaeus
ENSPVAG00000000908	ZNF550	100	70.238	ENSMICG00000007561	ZNF550	99	70.238	Microcebus_murinus
ENSPVAG00000000908	ZNF550	100	65.871	ENSPPRG00000013475	ZNF550	99	65.871	Panthera_pardus
ENSPVAG00000000908	ZNF550	98	54.861	ENSPTIG00000018007	ZNF550	80	54.861	Panthera_tigris_altaica
ENSPVAG00000000908	ZNF550	100	71.496	ENSPTRG00000011560	ZNF550	99	71.259	Pan_troglodytes
ENSPVAG00000000908	ZNF550	100	71.394	ENSPANG00000030602	ZNF550	99	71.394	Papio_anubis
ENSPVAG00000000908	ZNF550	100	71.667	ENSPCOG00000018751	ZNF550	99	71.667	Propithecus_coquereli
ENSPVAG00000000908	ZNF550	100	72.115	ENSRBIG00000017275	ZNF550	99	71.875	Rhinopithecus_bieti
ENSPVAG00000000908	ZNF550	100	72.115	ENSRROG00000040063	ZNF550	99	71.875	Rhinopithecus_roxellana
ENSPVAG00000000908	ZNF550	98	73.966	ENSTTRG00000000293	ZNF550	100	73.966	Tursiops_truncatus