EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000000988 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 7395 bases
Position: chrGeneScaffold_2770:76861-84255
Accession: 105296804
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000000936	PseudoU_synth_2	PF00849.22	4.4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000000989	RPUSD4-201	1125	-	ENSPVAP00000000936	374 (aa)	XP_011365394	UPI00018B4602

Gene Model

Click here to download ENSPVAG00000000988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000000988's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000000988	RPUSD4	72	34.146	ENSPVAG00000011107	RPUSD3	78	34.146

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000000988	RPUSD4	98	82.561	ENSG00000165526	RPUSD4	97	82.561	Homo_sapiens
ENSPVAG00000000988	RPUSD4	89	51.170	ENSAPOG00000011024	rpusd4	86	51.170	Acanthochromis_polyacanthus
ENSPVAG00000000988	RPUSD4	99	83.602	ENSAMEG00000000127	-	99	83.602	Ailuropoda_melanoleuca
ENSPVAG00000000988	RPUSD4	82	77.241	ENSAMEG00000005953	-	98	77.241	Ailuropoda_melanoleuca
ENSPVAG00000000988	RPUSD4	86	50.462	ENSACIG00000003533	rpusd4	95	50.462	Amphilophus_citrinellus
ENSPVAG00000000988	RPUSD4	89	51.471	ENSAOCG00000015409	rpusd4	84	51.471	Amphiprion_ocellaris
ENSPVAG00000000988	RPUSD4	89	51.765	ENSAPEG00000018935	rpusd4	84	51.765	Amphiprion_percula
ENSPVAG00000000988	RPUSD4	88	50.294	ENSATEG00000008059	rpusd4	84	50.294	Anabas_testudineus
ENSPVAG00000000988	RPUSD4	74	60.215	ENSAPLG00000013250	RPUSD4	99	58.983	Anas_platyrhynchos
ENSPVAG00000000988	RPUSD4	92	62.644	ENSACAG00000000189	RPUSD4	95	62.644	Anolis_carolinensis
ENSPVAG00000000988	RPUSD4	98	82.561	ENSANAG00000024050	RPUSD4	99	82.561	Aotus_nancymaae
ENSPVAG00000000988	RPUSD4	87	51.976	ENSACLG00000020996	rpusd4	84	51.976	Astatotilapia_calliptera
ENSPVAG00000000988	RPUSD4	91	49.003	ENSAMXG00000031479	rpusd4	94	50.448	Astyanax_mexicanus
ENSPVAG00000000988	RPUSD4	100	78.571	ENSBTAG00000020900	RPUSD4	100	78.571	Bos_taurus
ENSPVAG00000000988	RPUSD4	98	82.289	ENSCJAG00000042850	RPUSD4	94	81.233	Callithrix_jacchus
ENSPVAG00000000988	RPUSD4	100	82.011	ENSCAFG00000010488	RPUSD4	100	82.011	Canis_familiaris
ENSPVAG00000000988	RPUSD4	100	82.011	ENSCAFG00020010621	RPUSD4	100	82.011	Canis_lupus_dingo
ENSPVAG00000000988	RPUSD4	100	78.628	ENSCHIG00000009975	RPUSD4	100	78.628	Capra_hircus
ENSPVAG00000000988	RPUSD4	99	85.215	ENSTSYG00000008456	RPUSD4	99	85.215	Carlito_syrichta
ENSPVAG00000000988	RPUSD4	67	80.080	ENSCAPG00000006040	RPUSD4	96	80.080	Cavia_aperea
ENSPVAG00000000988	RPUSD4	99	79.730	ENSCPOG00000014971	RPUSD4	98	79.730	Cavia_porcellus
ENSPVAG00000000988	RPUSD4	98	83.019	ENSCCAG00000027838	RPUSD4	99	83.019	Cebus_capucinus
ENSPVAG00000000988	RPUSD4	100	81.963	ENSCATG00000041570	RPUSD4	100	81.963	Cercocebus_atys
ENSPVAG00000000988	RPUSD4	99	83.243	ENSCLAG00000016553	RPUSD4	98	83.243	Chinchilla_lanigera
ENSPVAG00000000988	RPUSD4	100	81.432	ENSCSAG00000002274	RPUSD4	100	81.432	Chlorocebus_sabaeus
ENSPVAG00000000988	RPUSD4	75	84.099	ENSCHOG00000010249	RPUSD4	100	84.099	Choloepus_hoffmanni
ENSPVAG00000000988	RPUSD4	76	67.483	ENSCPBG00000011175	RPUSD4	99	67.483	Chrysemys_picta_bellii
ENSPVAG00000000988	RPUSD4	75	41.869	ENSCSAVG00000000872	-	56	41.869	Ciona_savignyi
ENSPVAG00000000988	RPUSD4	98	82.289	ENSCANG00000039684	RPUSD4	97	82.289	Colobus_angolensis_palliatus
ENSPVAG00000000988	RPUSD4	99	83.198	ENSCGRG00001024141	Rpusd4	98	83.198	Cricetulus_griseus_chok1gshd
ENSPVAG00000000988	RPUSD4	99	83.198	ENSCGRG00000014415	Rpusd4	98	83.198	Cricetulus_griseus_crigri
ENSPVAG00000000988	RPUSD4	89	50.592	ENSCVAG00000008761	rpusd4	86	50.592	Cyprinodon_variegatus
ENSPVAG00000000988	RPUSD4	89	50.888	ENSCVAG00000000392	rpusd4	95	50.888	Cyprinodon_variegatus
ENSPVAG00000000988	RPUSD4	86	50.462	ENSDARG00000012674	rpusd4	91	50.462	Danio_rerio
ENSPVAG00000000988	RPUSD4	100	78.780	ENSDNOG00000020026	RPUSD4	100	78.780	Dasypus_novemcinctus
ENSPVAG00000000988	RPUSD4	100	81.167	ENSDORG00000016717	Rpusd4	100	81.167	Dipodomys_ordii
ENSPVAG00000000988	RPUSD4	99	82.527	ENSETEG00000013953	RPUSD4	99	82.527	Echinops_telfairi
ENSPVAG00000000988	RPUSD4	100	86.207	ENSEASG00005022982	RPUSD4	100	86.207	Equus_asinus_asinus
ENSPVAG00000000988	RPUSD4	100	85.411	ENSECAG00000000557	RPUSD4	100	85.411	Equus_caballus
ENSPVAG00000000988	RPUSD4	81	82.258	ENSEEUG00000014036	RPUSD4	81	82.258	Erinaceus_europaeus
ENSPVAG00000000988	RPUSD4	93	53.425	ENSELUG00000008075	rpusd4	95	53.425	Esox_lucius
ENSPVAG00000000988	RPUSD4	100	82.228	ENSFCAG00000029789	RPUSD4	100	82.228	Felis_catus
ENSPVAG00000000988	RPUSD4	88	58.133	ENSFALG00000005171	RPUSD4	98	58.133	Ficedula_albicollis
ENSPVAG00000000988	RPUSD4	98	82.289	ENSFDAG00000014307	RPUSD4	97	82.289	Fukomys_damarensis
ENSPVAG00000000988	RPUSD4	89	52.071	ENSFHEG00000004329	rpusd4	87	52.071	Fundulus_heteroclitus
ENSPVAG00000000988	RPUSD4	86	50.613	ENSGMOG00000017726	rpusd4	96	50.613	Gadus_morhua
ENSPVAG00000000988	RPUSD4	96	55.707	ENSGALG00000024326	RPUSD4	99	56.452	Gallus_gallus
ENSPVAG00000000988	RPUSD4	90	46.974	ENSGAFG00000021559	rpusd4	87	47.093	Gambusia_affinis
ENSPVAG00000000988	RPUSD4	89	49.412	ENSGACG00000001657	rpusd4	100	49.412	Gasterosteus_aculeatus
ENSPVAG00000000988	RPUSD4	94	60.282	ENSGAGG00000000132	RPUSD4	96	60.282	Gopherus_agassizii
ENSPVAG00000000988	RPUSD4	98	82.016	ENSGGOG00000016494	RPUSD4	97	82.016	Gorilla_gorilla
ENSPVAG00000000988	RPUSD4	87	51.976	ENSHBUG00000022838	rpusd4	84	51.976	Haplochromis_burtoni
ENSPVAG00000000988	RPUSD4	98	82.834	ENSHGLG00000002285	RPUSD4	97	82.834	Heterocephalus_glaber_female
ENSPVAG00000000988	RPUSD4	98	82.834	ENSHGLG00100006385	RPUSD4	97	82.834	Heterocephalus_glaber_male
ENSPVAG00000000988	RPUSD4	88	51.051	ENSHCOG00000006612	rpusd4	84	51.051	Hippocampus_comes
ENSPVAG00000000988	RPUSD4	86	53.067	ENSIPUG00000023879	rusd4	84	53.067	Ictalurus_punctatus
ENSPVAG00000000988	RPUSD4	97	84.341	ENSSTOG00000025280	RPUSD4	100	84.341	Ictidomys_tridecemlineatus
ENSPVAG00000000988	RPUSD4	98	84.699	ENSJJAG00000018673	Rpusd4	98	84.699	Jaculus_jaculus
ENSPVAG00000000988	RPUSD4	89	50.588	ENSKMAG00000021805	rpusd4	88	50.588	Kryptolebias_marmoratus
ENSPVAG00000000988	RPUSD4	97	47.956	ENSLBEG00000020394	rpusd4	91	50.765	Labrus_bergylta
ENSPVAG00000000988	RPUSD4	86	61.043	ENSLACG00000011028	RPUSD4	85	59.882	Latimeria_chalumnae
ENSPVAG00000000988	RPUSD4	86	48.765	ENSLOCG00000003124	rpusd4	86	47.840	Lepisosteus_oculatus
ENSPVAG00000000988	RPUSD4	100	83.024	ENSLAFG00000005211	RPUSD4	100	83.024	Loxodonta_africana
ENSPVAG00000000988	RPUSD4	100	81.963	ENSMFAG00000039513	RPUSD4	100	81.963	Macaca_fascicularis
ENSPVAG00000000988	RPUSD4	100	81.698	ENSMMUG00000007933	RPUSD4	100	81.698	Macaca_mulatta
ENSPVAG00000000988	RPUSD4	100	81.698	ENSMNEG00000027414	RPUSD4	100	81.698	Macaca_nemestrina
ENSPVAG00000000988	RPUSD4	100	81.698	ENSMLEG00000042461	RPUSD4	100	81.698	Mandrillus_leucophaeus
ENSPVAG00000000988	RPUSD4	92	48.864	ENSMAMG00000023839	rpusd4	91	48.864	Mastacembelus_armatus
ENSPVAG00000000988	RPUSD4	87	51.976	ENSMZEG00005011999	rpusd4	84	51.976	Maylandia_zebra
ENSPVAG00000000988	RPUSD4	84	58.044	ENSMGAG00000000840	RPUSD4	99	58.879	Meleagris_gallopavo
ENSPVAG00000000988	RPUSD4	100	80.106	ENSMAUG00000010280	Rpusd4	100	80.106	Mesocricetus_auratus
ENSPVAG00000000988	RPUSD4	100	83.024	ENSMICG00000015979	RPUSD4	100	83.024	Microcebus_murinus
ENSPVAG00000000988	RPUSD4	98	80.328	ENSMOCG00000000661	Rpusd4	97	80.328	Microtus_ochrogaster
ENSPVAG00000000988	RPUSD4	80	54.455	ENSMMOG00000021731	rpusd4	90	54.455	Mola_mola
ENSPVAG00000000988	RPUSD4	93	72.254	ENSMODG00000004521	RPUSD4	87	72.254	Monodelphis_domestica
ENSPVAG00000000988	RPUSD4	81	51.948	ENSMALG00000005839	rpusd4	98	50.617	Monopterus_albus
ENSPVAG00000000988	RPUSD4	100	80.637	MGP_CAROLIEiJ_G0031954	Rpusd4	100	80.637	Mus_caroli
ENSPVAG00000000988	RPUSD4	99	80.749	ENSMUSG00000032044	Rpusd4	99	80.749	Mus_musculus
ENSPVAG00000000988	RPUSD4	100	80.902	MGP_PahariEiJ_G0014819	Rpusd4	100	80.902	Mus_pahari
ENSPVAG00000000988	RPUSD4	99	81.016	MGP_SPRETEiJ_G0033078	Rpusd4	99	81.016	Mus_spretus
ENSPVAG00000000988	RPUSD4	99	81.117	ENSMPUG00000006608	RPUSD4	100	81.117	Mustela_putorius_furo
ENSPVAG00000000988	RPUSD4	68	87.008	ENSMLUG00000029348	-	100	87.008	Myotis_lucifugus
ENSPVAG00000000988	RPUSD4	98	84.511	ENSMLUG00000017328	-	97	84.511	Myotis_lucifugus
ENSPVAG00000000988	RPUSD4	96	80.495	ENSNGAG00000020847	Rpusd4	97	80.495	Nannospalax_galili
ENSPVAG00000000988	RPUSD4	87	51.976	ENSNBRG00000005207	rpusd4	95	51.976	Neolamprologus_brichardi
ENSPVAG00000000988	RPUSD4	98	83.106	ENSNLEG00000007465	RPUSD4	97	83.106	Nomascus_leucogenys
ENSPVAG00000000988	RPUSD4	97	71.154	ENSMEUG00000004370	RPUSD4	96	71.154	Notamacropus_eugenii
ENSPVAG00000000988	RPUSD4	71	60.377	ENSOPRG00000013141	-	100	60.377	Ochotona_princeps
ENSPVAG00000000988	RPUSD4	99	81.081	ENSODEG00000004577	RPUSD4	98	81.081	Octodon_degus
ENSPVAG00000000988	RPUSD4	94	50.000	ENSONIG00000018879	rpusd4	92	51.312	Oreochromis_niloticus
ENSPVAG00000000988	RPUSD4	78	68.814	ENSOANG00000007247	RPUSD4	95	68.687	Ornithorhynchus_anatinus
ENSPVAG00000000988	RPUSD4	94	86.364	ENSOCUG00000017039	RPUSD4	93	86.364	Oryctolagus_cuniculus
ENSPVAG00000000988	RPUSD4	87	49.408	ENSORLG00000002750	rpusd4	92	48.961	Oryzias_latipes
ENSPVAG00000000988	RPUSD4	77	52.721	ENSORLG00020002044	rpusd4	73	52.721	Oryzias_latipes_hni
ENSPVAG00000000988	RPUSD4	86	50.154	ENSORLG00015020034	rpusd4	81	50.154	Oryzias_latipes_hsok
ENSPVAG00000000988	RPUSD4	87	51.205	ENSOMEG00000004861	rpusd4	81	51.205	Oryzias_melastigma
ENSPVAG00000000988	RPUSD4	97	81.096	ENSOGAG00000008922	RPUSD4	97	81.096	Otolemur_garnettii
ENSPVAG00000000988	RPUSD4	97	79.675	ENSOARG00000012238	RPUSD4	98	79.515	Ovis_aries
ENSPVAG00000000988	RPUSD4	100	81.698	ENSPPAG00000042883	RPUSD4	93	81.698	Pan_paniscus
ENSPVAG00000000988	RPUSD4	100	81.963	ENSPPRG00000003081	RPUSD4	100	81.963	Panthera_pardus
ENSPVAG00000000988	RPUSD4	100	81.963	ENSPTIG00000012059	RPUSD4	100	81.963	Panthera_tigris_altaica
ENSPVAG00000000988	RPUSD4	98	82.561	ENSPTRG00000004454	RPUSD4	97	82.561	Pan_troglodytes
ENSPVAG00000000988	RPUSD4	100	81.432	ENSPANG00000015040	RPUSD4	100	81.432	Papio_anubis
ENSPVAG00000000988	RPUSD4	89	57.738	ENSPKIG00000023986	rpusd4	86	57.738	Paramormyrops_kingsleyae
ENSPVAG00000000988	RPUSD4	81	66.013	ENSPSIG00000014268	RPUSD4	97	66.013	Pelodiscus_sinensis
ENSPVAG00000000988	RPUSD4	86	50.920	ENSPMGG00000002806	rpusd4	90	50.769	Periophthalmus_magnuspinnatus
ENSPVAG00000000988	RPUSD4	98	74.590	ENSPEMG00000000278	Rpusd4	97	74.590	Peromyscus_maniculatus_bairdii
ENSPVAG00000000988	RPUSD4	83	44.444	ENSPMAG00000008183	rpusd4	99	42.982	Petromyzon_marinus
ENSPVAG00000000988	RPUSD4	97	72.527	ENSPCIG00000010212	RPUSD4	100	72.527	Phascolarctos_cinereus
ENSPVAG00000000988	RPUSD4	90	48.424	ENSPFOG00000019030	rpusd4	91	48.424	Poecilia_formosa
ENSPVAG00000000988	RPUSD4	90	48.991	ENSPLAG00000016848	rpusd4	88	48.991	Poecilia_latipinna
ENSPVAG00000000988	RPUSD4	90	47.839	ENSPMEG00000017534	rpusd4	88	47.839	Poecilia_mexicana
ENSPVAG00000000988	RPUSD4	85	49.387	ENSPREG00000005689	rpusd4	84	49.387	Poecilia_reticulata
ENSPVAG00000000988	RPUSD4	98	83.106	ENSPPYG00000004043	RPUSD4	97	83.106	Pongo_abelii
ENSPVAG00000000988	RPUSD4	80	85.000	ENSPCAG00000000753	RPUSD4	80	85.000	Procavia_capensis
ENSPVAG00000000988	RPUSD4	98	77.596	ENSPCOG00000020694	RPUSD4	99	77.596	Propithecus_coquereli
ENSPVAG00000000988	RPUSD4	87	51.064	ENSPNYG00000009652	rpusd4	84	51.064	Pundamilia_nyererei
ENSPVAG00000000988	RPUSD4	93	50.430	ENSPNAG00000012264	rpusd4	90	50.430	Pygocentrus_nattereri
ENSPVAG00000000988	RPUSD4	99	81.551	ENSRNOG00000011567	Rpusd4	99	81.551	Rattus_norvegicus
ENSPVAG00000000988	RPUSD4	97	83.657	ENSRBIG00000034842	RPUSD4	97	83.106	Rhinopithecus_bieti
ENSPVAG00000000988	RPUSD4	97	83.657	ENSRROG00000039753	RPUSD4	97	83.106	Rhinopithecus_roxellana
ENSPVAG00000000988	RPUSD4	98	81.471	ENSSBOG00000030413	RPUSD4	99	81.471	Saimiri_boliviensis_boliviensis
ENSPVAG00000000988	RPUSD4	80	77.076	ENSSHAG00000008304	RPUSD4	99	77.076	Sarcophilus_harrisii
ENSPVAG00000000988	RPUSD4	88	55.655	ENSSFOG00015006203	rpusd4	91	55.655	Scleropages_formosus
ENSPVAG00000000988	RPUSD4	90	50.588	ENSSMAG00000020978	rpusd4	87	51.672	Scophthalmus_maximus
ENSPVAG00000000988	RPUSD4	84	50.000	ENSSDUG00000013399	rpusd4	84	50.000	Seriola_dumerili
ENSPVAG00000000988	RPUSD4	83	50.943	ENSSLDG00000023507	rpusd4	83	50.943	Seriola_lalandi_dorsalis
ENSPVAG00000000988	RPUSD4	93	59.270	ENSSPUG00000001401	RPUSD4	98	59.831	Sphenodon_punctatus
ENSPVAG00000000988	RPUSD4	92	51.003	ENSSPAG00000012163	rpusd4	89	51.003	Stegastes_partitus
ENSPVAG00000000988	RPUSD4	100	85.676	ENSSSCG00000015233	RPUSD4	100	85.676	Sus_scrofa
ENSPVAG00000000988	RPUSD4	80	59.667	ENSTGUG00000000773	RPUSD4	100	59.667	Taeniopygia_guttata
ENSPVAG00000000988	RPUSD4	87	50.303	ENSTRUG00000012283	rpusd4	84	50.303	Takifugu_rubripes
ENSPVAG00000000988	RPUSD4	92	48.424	ENSTNIG00000014676	rpusd4	88	48.424	Tetraodon_nigroviridis
ENSPVAG00000000988	RPUSD4	100	83.289	ENSTTRG00000001555	RPUSD4	100	83.289	Tursiops_truncatus
ENSPVAG00000000988	RPUSD4	50	83.871	ENSUAMG00000005503	-	97	83.871	Ursus_americanus
ENSPVAG00000000988	RPUSD4	100	82.759	ENSUMAG00000002219	RPUSD4	100	82.759	Ursus_maritimus
ENSPVAG00000000988	RPUSD4	71	84.151	ENSVPAG00000001066	RPUSD4	100	84.151	Vicugna_pacos
ENSPVAG00000000988	RPUSD4	100	81.481	ENSVVUG00000020101	RPUSD4	100	81.481	Vulpes_vulpes
ENSPVAG00000000988	RPUSD4	89	48.830	ENSXCOG00000004676	rpusd4	89	48.538	Xiphophorus_couchianus
ENSPVAG00000000988	RPUSD4	89	48.830	ENSXMAG00000023351	rpusd4	87	48.830	Xiphophorus_maculatus