EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000001116 (Gene tree)
Gene ID: -
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 4241 bases
Position: chrGeneScaffold_3617:6436-10676
Accession: 19950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000001053	RRM_1	PF00076.22	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000001115	RDM1-201	753	-	ENSPVAP00000001053	251 (aa)	-	UPI00018B0F9D

Gene Model

Click here to download ENSPVAG00000001116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000001116's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000001116	RDM1	100	83.267	ENSG00000278023	RDM1	97	90.226	Homo_sapiens
ENSPVAG00000001116	RDM1	72	38.251	ENSAPOG00000021886	zgc:103564	70	38.251	Acanthochromis_polyacanthus
ENSPVAG00000001116	RDM1	92	34.764	ENSAPEG00000008929	zgc:103564	86	34.764	Amphiprion_percula
ENSPVAG00000001116	RDM1	88	54.505	ENSAPLG00000004384	RDM1	85	54.505	Anas_platyrhynchos
ENSPVAG00000001116	RDM1	100	47.244	ENSACAG00000012989	-	90	48.031	Anolis_carolinensis
ENSPVAG00000001116	RDM1	100	81.275	ENSANAG00000032752	RDM1	96	87.970	Aotus_nancymaae
ENSPVAG00000001116	RDM1	100	86.111	ENSBTAG00000000030	RDM1	88	86.111	Bos_taurus
ENSPVAG00000001116	RDM1	100	82.470	ENSCJAG00000015031	RDM1	96	89.474	Callithrix_jacchus
ENSPVAG00000001116	RDM1	100	75.781	ENSCAFG00000015160	-	100	75.781	Canis_familiaris
ENSPVAG00000001116	RDM1	100	87.302	ENSCHIG00000020607	RDM1	89	87.302	Capra_hircus
ENSPVAG00000001116	RDM1	100	68.924	ENSCPOG00000001495	-	87	68.924	Cavia_porcellus
ENSPVAG00000001116	RDM1	100	80.478	ENSCCAG00000035763	RDM1	96	87.218	Cebus_capucinus
ENSPVAG00000001116	RDM1	100	85.259	ENSCATG00000044451	RDM1	96	90.977	Cercocebus_atys
ENSPVAG00000001116	RDM1	93	80.258	ENSCSAG00000006209	RDM1	87	80.258	Chlorocebus_sabaeus
ENSPVAG00000001116	RDM1	88	54.751	ENSCPBG00000009105	RDM1	84	54.545	Chrysemys_picta_bellii
ENSPVAG00000001116	RDM1	100	83.665	ENSCANG00000041322	RDM1	95	82.609	Colobus_angolensis_palliatus
ENSPVAG00000001116	RDM1	100	73.307	ENSCGRG00001015927	Rdm1	88	73.307	Cricetulus_griseus_chok1gshd
ENSPVAG00000001116	RDM1	99	36.111	ENSCVAG00000001956	zgc:103564	98	34.317	Cyprinodon_variegatus
ENSPVAG00000001116	RDM1	88	84.091	ENSDNOG00000045224	-	82	84.091	Dasypus_novemcinctus
ENSPVAG00000001116	RDM1	79	82.178	ENSEASG00005010554	RDM1	71	82.178	Equus_asinus_asinus
ENSPVAG00000001116	RDM1	100	83.465	ENSECAG00000022182	RDM1	90	83.465	Equus_caballus
ENSPVAG00000001116	RDM1	87	75.342	ENSEEUG00000006127	RDM1	87	75.342	Erinaceus_europaeus
ENSPVAG00000001116	RDM1	92	84.783	ENSFCAG00000043429	RDM1	96	87.218	Felis_catus
ENSPVAG00000001116	RDM1	100	54.762	ENSGALG00000000243	RDM1	88	54.762	Gallus_gallus
ENSPVAG00000001116	RDM1	92	52.814	ENSGAGG00000000293	-	73	52.814	Gopherus_agassizii
ENSPVAG00000001116	RDM1	100	83.665	ENSGGOG00000010584	RDM1	96	90.226	Gorilla_gorilla
ENSPVAG00000001116	RDM1	91	37.662	ENSHCOG00000002518	-	82	37.662	Hippocampus_comes
ENSPVAG00000001116	RDM1	100	81.275	ENSSTOG00000022491	RDM1	88	81.275	Ictidomys_tridecemlineatus
ENSPVAG00000001116	RDM1	100	83.004	ENSLAFG00000029300	RDM1	89	83.004	Loxodonta_africana
ENSPVAG00000001116	RDM1	100	84.861	ENSMFAG00000032968	RDM1	96	90.977	Macaca_fascicularis
ENSPVAG00000001116	RDM1	100	85.259	ENSMMUG00000006847	RDM1	95	83.478	Macaca_mulatta
ENSPVAG00000001116	RDM1	100	84.861	ENSMNEG00000039977	RDM1	96	90.977	Macaca_nemestrina
ENSPVAG00000001116	RDM1	100	84.861	ENSMLEG00000041158	RDM1	95	83.478	Mandrillus_leucophaeus
ENSPVAG00000001116	RDM1	93	52.966	ENSMGAG00000008774	RDM1	86	55.909	Meleagris_gallopavo
ENSPVAG00000001116	RDM1	100	73.307	ENSMAUG00000018559	Rdm1	88	73.307	Mesocricetus_auratus
ENSPVAG00000001116	RDM1	100	84.861	ENSMICG00000038651	RDM1	97	86.087	Microcebus_murinus
ENSPVAG00000001116	RDM1	100	70.635	ENSMOCG00000015095	Rdm1	92	70.635	Microtus_ochrogaster
ENSPVAG00000001116	RDM1	100	64.940	ENSMODG00000011101	RDM1	91	64.940	Monodelphis_domestica
ENSPVAG00000001116	RDM1	99	73.200	MGP_CAROLIEiJ_G0017226	Rdm1	88	73.307	Mus_caroli
ENSPVAG00000001116	RDM1	99	72.400	ENSMUSG00000010362	Rdm1	88	72.510	Mus_musculus
ENSPVAG00000001116	RDM1	100	72.510	MGP_PahariEiJ_G0018356	Rdm1	88	72.510	Mus_pahari
ENSPVAG00000001116	RDM1	99	72.400	MGP_SPRETEiJ_G0018069	Rdm1	88	72.510	Mus_spretus
ENSPVAG00000001116	RDM1	100	86.957	ENSMPUG00000008363	RDM1	88	86.957	Mustela_putorius_furo
ENSPVAG00000001116	RDM1	100	84.462	ENSNLEG00000014173	RDM1	87	91.089	Nomascus_leucogenys
ENSPVAG00000001116	RDM1	100	64.143	ENSMEUG00000015826	RDM1	100	64.143	Notamacropus_eugenii
ENSPVAG00000001116	RDM1	100	76.587	ENSOCUG00000022704	RDM1	97	76.587	Oryctolagus_cuniculus
ENSPVAG00000001116	RDM1	100	82.470	ENSOGAG00000011332	RDM1	88	82.470	Otolemur_garnettii
ENSPVAG00000001116	RDM1	100	84.462	ENSPPAG00000029969	RDM1	88	84.462	Pan_paniscus
ENSPVAG00000001116	RDM1	100	84.462	ENSPTRG00000009031	RDM1	96	90.977	Pan_troglodytes
ENSPVAG00000001116	RDM1	100	84.861	ENSPANG00000022933	RDM1	96	90.226	Papio_anubis
ENSPVAG00000001116	RDM1	100	73.705	ENSPEMG00000018985	Rdm1	89	73.705	Peromyscus_maniculatus_bairdii
ENSPVAG00000001116	RDM1	100	82.869	ENSPPYG00000008198	RDM1	88	82.869	Pongo_abelii
ENSPVAG00000001116	RDM1	100	83.267	ENSPCOG00000017995	RDM1	96	84.962	Propithecus_coquereli
ENSPVAG00000001116	RDM1	100	72.112	ENSRNOG00000020751	Rdm1	88	72.112	Rattus_norvegicus
ENSPVAG00000001116	RDM1	100	83.267	ENSRBIG00000030000	RDM1	96	90.226	Rhinopithecus_bieti
ENSPVAG00000001116	RDM1	100	83.665	ENSRROG00000035242	RDM1	95	83.478	Rhinopithecus_roxellana
ENSPVAG00000001116	RDM1	100	69.323	ENSSHAG00000013584	RDM1	91	69.323	Sarcophilus_harrisii
ENSPVAG00000001116	RDM1	99	52.000	ENSSPUG00000010941	RDM1	90	52.000	Sphenodon_punctatus
ENSPVAG00000001116	RDM1	92	38.197	ENSSPAG00000011690	-	85	38.197	Stegastes_partitus
ENSPVAG00000001116	RDM1	89	78.125	ENSSSCG00000017574	-	93	78.125	Sus_scrofa
ENSPVAG00000001116	RDM1	87	60.274	ENSTBEG00000010030	RDM1	87	60.274	Tupaia_belangeri
ENSPVAG00000001116	RDM1	100	87.649	ENSUAMG00000027279	RDM1	88	87.649	Ursus_americanus
ENSPVAG00000001116	RDM1	100	87.649	ENSUMAG00000015423	RDM1	87	87.649	Ursus_maritimus